FC878813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: MEGL_PSEPU (Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 89/216 (41.20%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 232 EHGGVNMS-IEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVN 873 +HGG + + +ATFT E FAGE YSR NPT+ L +MA+LEG EA ASGM AI+S L L G V+ TLYG T A L H + VD++D + + +A+ T+V+YFES +NP + +A+I ++++A G TVVVDNT+ +P + P LGAD+VVHS +K++SG DI AG V G LV+ Sbjct: 23 DHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGH----FYSRISNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGE-FGVKLRHVDMADLQALEAAMTPA-TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVD 232
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: METZ_PSEAE (O-succinylhomoserine sulfhydrylase OS=Pseudomonas aeruginosa GN=metZ PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.290e-31 Identity = 82/220 (37.27%), Postives = 125/220 (56.82%), Query Frame = 1 Query: 229 GEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMG 885 GEHG ++ ++++ FAGE+ + +YSR+ NPTV ++AALEG E A TASGMSAI +++M LCSSG HV+ +R+++G T +L +F R I + +SD +A + TK+ + ES SNP + +I L+ +AH KG + VDN F +P + P +LGADVV+HS +K+I G + G V G + ++G Sbjct: 34 GEHGE---ALFTTSSYVFRTAADAAARFAGEVPGN----VYSRYTNPTVRTFEERIAALEGAEQAVATASGMSAILALVMSLCSSGDHVLVSRSVFGSTISLFDKYFKR-FGIQVDYPPLSDLAAWEAA-CKPNTKLFFVESPSNPLAELVDIAALAEIAHAKGALLAVDNCFCTPALQQPLKLGADVVIHSATKYIDGQGRGMGGVVAGRGEQMKEVVG 244
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 8.146e-29 Identity = 68/184 (36.96%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 343 FIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMGLH 891 F Y R+ NPT + L +++ALEG E+ ASGM A + +L+ L +GGH+V Y T + +F P+ IT T +D +D + +A+ + + + + ES +NP L +I +S++ H +G V +D TF +PL LGAD+VVHS +K+I G D++AG +CG LV+ + LH Sbjct: 224 FEYGRYGNPTTVVLEDKISALEGAESTLVMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFMENFLPK-LGITVTVIDPADIAGLEAAVNEFKVSLFFTESPTNPFLRCVDIELVSKICHKRGTLVCIDGTFATPLNQKALALGADLVVHSATKYIGGHNDVLAGCICGSLKLVSEIRNLH 406
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: MCCB_BACSU (Cystathionine gamma-lyase OS=Bacillus subtilis GN=mccB PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 9.007e-28 Identity = 77/207 (37.20%), Postives = 119/207 (57.49%), Query Frame = 1 Query: 235 HGGVNMSIEASA-TFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAV 849 HGG+ + A + + + T ++ AG+ + YSR NPT L + LE EA Y +SGM+AI++V+M L +SG HVV +YGGT+ ++T R I +TFVD S E V AI + TK +Y E+ +NP L + ++ ++ +A GV ++VDNTF +P P LGAD+V+HS +K++ G +D++ G V Sbjct: 9 HGGITGDEKTGAVSVPIYQVSTYKQPKAGQ----HTGYEYSRTANPTRTALEALVTELESGEAGYAFSSGMAAITAVMM-LFNSGDHVVLTDDVYGGTYRVMTKVLNRL-GIESTFVDTSSREEVEKAI-RPNTKAIYIETPTNPLLKITDLTLMADIAKKAGVLLIVDNTFNTPYFQQPLTLGADIVLHSATKYLGGHSDVVGGLV 208
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: METC_COXBU (Cystathionine beta-lyase OS=Coxiella burnetii GN=metC PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.218e-26 Identity = 72/213 (33.80%), Postives = 117/213 (54.93%), Query Frame = 1 Query: 271 TFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAG-AVCGPANLVNSMMGLHQGAL 903 T VM P +A + + YSR NPT R +A LE + + ASGM+A +++L +L G HVV +YGG++ L + R+ ++ +FVD +D V A+ +TK+L+ ES SNP L + ++ +++ +A +K + V DNTF +P++ P LG D+V HS +K+++G +DII G AV G + + Q A+ Sbjct: 26 TGAVMTPIYTASTYAQKSPGVHQGYEYSRSQNPTRFAYERCVADLESGQHGFAFASGMAATATIL-ELLQPGDHVVVMDDVYGGSYRLFENVRKRSAGLSFSFVDFTDENKVREAVT-AKTKMLWVESPSNPRLKIVDLAKIAEIAKEKNIIAVADNTFATPIIQRPLELGFDIVTHSATKYLNGHSDIIGGVAVVGDNKTLAEQLKYLQNAI 236
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: METC_BACSU (Cystathionine beta-lyase metC OS=Bacillus subtilis GN=metC PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.942e-26 Identity = 77/206 (37.38%), Postives = 115/206 (55.83%), Query Frame = 1 Query: 229 GEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAG 843 G G V++ I+ ++TF E E G + YSR PT L +AALEG + +SGM+AIS+ + L S G HV+ +YGGT ++T R I TFVD++D V +I + TKV+Y E+ SNPTL + +I + +LA + G +DNTF +P + P LG D+V+HS +KF+SG +D+++G Sbjct: 21 GGTGAVSVPIQHASTFHQSSFE--------EFGA----YDYSRSGTPTRTALEETIAALEGGTRGFAFSSGMAAISTAFL-LLSQGDHVLVTEDVYGGTFRMVTEVLTRF-GIEHTFVDMTDRNEVARSI-KPNTKVIYMETPSNPTLGITDIKAVVQLAKENGCLTFLDNTFMTPALQRPLDLGVDIVLHSATKFLSGHSDVLSG 211
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: METB_MYCTU (Cystathionine gamma-synthase OS=Mycobacterium tuberculosis GN=metB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.942e-26 Identity = 77/205 (37.56%), Postives = 114/205 (55.61%), Query Frame = 1 Query: 238 GGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAV 849 G VN+ I AS+TF +G R F Y+R NPT L +AA+E A +SGM+A L + G HVV YGGT L+ F R ++ T V ++D + V +AI RT++++ E+ +NP L++A+I ++ L D+ V+VDNTF SP + P RLGADVV+HS +K+I G +D++ GA+ Sbjct: 30 GAVNVPIYASSTFA-----------QDGVGGLRGGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTR-WDVQYTPVRLADLDAVGAAITP-RTRLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGAL 221
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: METB_MYCBO (Cystathionine gamma-synthase OS=Mycobacterium bovis GN=metB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.942e-26 Identity = 77/205 (37.56%), Postives = 114/205 (55.61%), Query Frame = 1 Query: 238 GGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAV 849 G VN+ I AS+TF +G R F Y+R NPT L +AA+E A +SGM+A L + G HVV YGGT L+ F R ++ T V ++D + V +AI RT++++ E+ +NP L++A+I ++ L D+ V+VDNTF SP + P RLGADVV+HS +K+I G +D++ GA+ Sbjct: 30 GAVNVPIYASSTFA-----------QDGVGGLRGGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTR-WDVQYTPVRLADLDAVGAAITP-RTRLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGAL 221
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: CYSD_EMENI (O-acetylhomoserine (thiol)-lyase OS=Emericella nidulans GN=cysD PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 2.453e-25 Identity = 69/170 (40.59%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 346 IYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSP--LVLSPARLGADVVVHSISKFISGGADIIAGAV 849 IYSR NPTV +++AALEG AA +SG +A + L +G ++V+ LYGGT+ FPR ITT FV E + +A + RTK +Y E+I NP V + ++++AH+KG+ +VVDNTF + P GAD+VVHS +K+I G I G V Sbjct: 57 IYSRIMNPTVDVFEKRIAALEGGVAAVAASSGQAAQFMAISALAHAGDNIVSTSNLYGGTYNQFKVLFPR-LGITTKFVQGDKAEDI-AAAIDDRTKAVYVETIGNPRYNVPDFEVIAKVAHEKGIPLVVDNTFGAGGYFVRPIEHGADIVVHSATKWIGGHGTTIGGVV 224
BLAST of FC878813 vs. ExPASy Swiss-Prot
Match: METB_HERAU (Probable cystathionine gamma-synthase (Fragment) OS=Herpetosiphon aurantiacus GN=metB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.137e-25 Identity = 71/196 (36.22%), Postives = 111/196 (56.63%), Query Frame = 1 Query: 265 SATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAV 849 S T V+ P +A D + YSR NPT L +AALE + A ASG+ A S+ LM + +G HV+ +YGGT+ L ++ F+D++D E V +AI + T++++ E+ +NP L +A I ++R+A + G+ +VDNTF SP P LGAD+V+HS +K+I G +D++ GA+ Sbjct: 18 SVTGAVIVPIYQTSTYAQRGVGDHTGYEYSRTDNPTRTALQTCLAALEEAKHALVFASGLGA-STTLMLMLKAGDHVICGDDVYGGTYRLFQRVMTEH-GLSFDFIDMADPEAVRAAI-KPNTRLIWLETPTNPLLKLAPIAAITRVAREHGIWTIVDNTFASPYNQRPITLGADMVLHSTTKYIGGHSDVVGGAI 210 The following BLAST results are available for this feature:
BLAST of FC878813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878813 ID=FC878813; Name=FC878813; organism=Citrus clementina; type=EST; length=912bpback to top |