FC878825

Overview
NameFC878825
Unique NameFC878825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length904
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7330 contig Ccv1_Contig7330:58..961. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878825 vs. ExPASy Swiss-Prot
Match: BEH4_ARATH (BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.903e-79
Identity = 158/290 (54.48%), Postives = 178/290 (61.38%), Query Frame = 2
Query:   59 MTSGTRMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGC-KPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHANGSADANSLIPWLKNLXXXXXXXXXKD---PHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLS----GGPSRMWTPGQSGTCSPAVPAGVDNTSDVPM 904
            MTSGTRMPTW              AIAAKI+ GLRMYGNY LPKHCDNNEVLKALCNEAGW VE DGTTYRKGC +PVE M++ GG                                  +    +G  D  SLIPWLK+L              P+++YI GGSISAPVTPPLSSPT RTPR   DW +          +  F  SSTPPSP RQ++PDS W SGIQ+ QS P+SPTFSLVS+NPFGF+EE  S    GG SRMWTPGQSGTCSPA+P G D T+DVPM
Sbjct:    1 MTSGTRMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCSRPVERMEIGGGSATASPCSSYQPSPCASYNPSPGSSNFMSPASSSFANLTSG--DGQSLIPWLKHLSTTSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTARTPRMNTDWQQ---------LNNSFFVSSTPPSPTRQIIPDSEWFSGIQLAQSVPASPTFSLVSQNPFGFKEEAASAAGGGGGSRMWTPGQSGTCSPAIPPGADQTADVPM 279          
BLAST of FC878825 vs. ExPASy Swiss-Prot
Match: BEH3_ARATH (BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana GN=BEH3 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.710e-63
Identity = 138/284 (48.59%), Postives = 157/284 (55.28%), Query Frame = 2
Query:   59 MTSGTRMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHANGSADANSLIPWLKNLXXXXXXXXXKDPHHM-YIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLSGG-PSRMWTPGQSGTCSPAVPAGVDNTSDVPM 904
            MTSGTR PTW              AIAAKI+AGLR++GN++LPKHCDNNEVLKALCNEAGWTVE+DGTTYRKGCKP++ MD+M G                                  +    N   DANSLIPWLKNL           P  + + HG SISAPVTPPL                                 +  P+  +  +PDSGWLSG+Q PQSGPSSPTFSLVSRNPF  +E    G   S MWTPGQSG CSPA+PAGVD  SDVPM
Sbjct:    1 MTSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPMDRMDLMNG--------STSASPCSSYQHSPRASYNPSPSSSSFPSPTNPFGDANSLIPWLKNL-------SSNSPSKLPFFHGNSISAPVTPPL---------------------------------ARSPTRDQVTIPDSGWLSGMQTPQSGPSSPTFSLVSRNPFFDKEAFKMGDCNSPMWTPGQSGNCSPAIPAGVDQNSDVPM 236          
BLAST of FC878825 vs. ExPASy Swiss-Prot
Match: BZR2_ARATH (Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis thaliana GN=BZR2 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28
Identity = 97/285 (34.04%), Postives = 125/285 (43.86%), Query Frame = 2
Query:   32 ATSFSASVKMTSGTRMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHY-TPHANGSA-DANSLIPWLKNLXXXXXXXXXKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPT-------AVAAWAGQHYPFLPSSTPPSPGRQ-------VLP----------DSG-WLSGIQIPQSG-------PSSPTFSLVSRNP 784
            +TS +A+    +  R P+W              A+AAKIY GLR  GNY LPKHCDNNEVLKALC+EAGW VEEDGTTYRKG KP+   D+ G                                   + +P   G   + +++ P+L+N            P  +     S SAPVTPP+SSPT R P+    W+  T       A  +    +YPF   S P SP           +P          DSG W+S  +  Q         P+SPTF+LV   P
Sbjct:    8 STSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLP-GDMAGSSSRATPYSSHNQSPLSSTFDSPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRN---------GGIPSSLPPLRISNSAPVTPPVSSPTSRNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAPATIPECDESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAP 282          
BLAST of FC878825 vs. ExPASy Swiss-Prot
Match: BZR1_ARATH (Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28
Identity = 97/288 (33.68%), Postives = 127/288 (44.10%), Query Frame = 2
Query:   32 ATSFSASVKMTSGT---RMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHANGSADAN---SLIPWLKNLXXXXXXXXXKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWD----EPTAVA--AWAGQHYPFLPSSTPPSPGRQ-------VLP----------DSG-WLSGIQIPQSG-------PSSPTFSLVSRNP 784
            ATS SA+    +     R P+W              A+AAKIY GLR  G+Y LPKHCDNNEVLKALC EAGW VEEDGTTYRKGCKP+   ++ G                                   +   + G  + N   +  P+L+N            P  +     S S PVTPP+SSPT + P+   +W+    +  A+A  + A  +YPF   S P SP  +        +P          DSG W+S  +  Q         P+SPTF+LV   P
Sbjct:    6 ATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLP-GEIAGTSSRVTPYSSQNQSPLSSAFQSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRN---------GGIPSSLPSLRISNSCPVTPPVSSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPECDESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAP 283          
BLAST of FC878825 vs. ExPASy Swiss-Prot
Match: BEH2_ARATH (BES1/BZR1 homolog protein 2 OS=Arabidopsis thaliana GN=BEH2 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.799e-27
Identity = 96/293 (32.76%), Postives = 125/293 (42.66%), Query Frame = 2
Query:   62 TSGTRMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHA--NGSADANSLIPWLKNLXXXXXXXXXKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQV------------------LPDSG-WLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLSGGPSRMWTPG-----QSGTCSP 862
            +S  R PTW              AI AKIY+GLR  GNY+LPKHCDNNEVLKALC EAGW VE+DGTTYRKG KP    D+ G                                   +   +  +G+  +  L+P+L N+           P ++     S SAPVTPPLSSPT R  + K   ++     +     +P    S P SP R+                   + DSG W   I    + P+SPTF+LV +       +    G S M   G     ++GT  P
Sbjct:   12 SSSGRTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVEDDGTTYRKGFKP-PASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSYHGSPVSSSFPSPSRYDGNPSSYLLLPFLHNIASSI-------PANLPPLRISNSAPVTPPLSSPTSRGSKRKLTSEQLPNGGSLHVLRHPLFAISAPSSPTRRAGHQTPPTIPECDESEEDSIEDSGRW---INFQSTAPTSPTFNLVQQTSMAIDMKRSDWGMSGMNGRGAEFEFENGTVKP 293          
BLAST of FC878825 vs. ExPASy Swiss-Prot
Match: BEH1_ARATH (BES1/BZR1 homolog protein 1 OS=Arabidopsis thaliana GN=BEH1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.415e-25
Identity = 85/254 (33.46%), Postives = 109/254 (42.91%), Query Frame = 2
Query:   74 RMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHANGSADANSLIPWLKNLXXXXXXXXXKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQV-----LPDS-------------GWLSGIQIPQSGPSSPTFSLVSRN 781
            RMPTW              AIAAKI+ GLR  GNY+LPKHCDNNEVLKALC EAGW V EDGTTYRKG +P E                                         + P+ +    +  LIP+L+NL         +          S SAPVTPP+SSP    PR          +  W   ++P    S P SP R++     +P+              G    + + Q+ P SPTF+LV ++
Sbjct:   14 RMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRKGSRPTE---TTVPCSSIQLSPQSSAFQSPIPSYQASPSSSSYPSPTRFDPNQS----STYLIPYLQNLASSGNLAPLRI---------SNSAPVTPPISSPRRSNPR----------LPRWQSSNFPV---SAPSSPTRRLHHYTSIPECDESDVSTVDSCRWGNFQSVNVSQTCPPSPTFNLVGKS 238          
The following BLAST results are available for this feature:
BLAST of FC878825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BEH4_ARATH2.903e-7954.48BES1/BZR1 homolog protein 4 OS=Arabidopsis thalian... [more]
BEH3_ARATH1.710e-6348.59BES1/BZR1 homolog protein 3 OS=Arabidopsis thalian... [more]
BZR2_ARATH6.786e-2834.04Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis th... [more]
BZR1_ARATH6.786e-2833.68Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis th... [more]
BEH2_ARATH9.799e-2732.76BES1/BZR1 homolog protein 2 OS=Arabidopsis thalian... [more]
BEH1_ARATH1.415e-2533.46BES1/BZR1 homolog protein 1 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA96BC06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA96BC06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878825 ID=FC878825; Name=FC878825; organism=Citrus clementina; type=EST; length=904bp
ACTTCACATGAAACCAAGCTCTTGAAAAGAAGCGACGTCGTTTTCGGCTT
CAGTGAAAATGACGTCTGGGACGAGAATGCCGACGTGGAAGGAGAGGGAC
AACAACAAGAGACGAGAGCGGCGACGGAGAGCCATCGCCGCGAAGATCTA
CGCTGGCTTAAGAATGTACGGTAACTATAGGCTCCCCAAACACTGCGACA
ATAACGAGGTGTTAAAAGCTCTCTGCAATGAGGCTGGCTGGACAGTCGAA
GAAGACGGCACCACTTACAGAAAGGGATGCAAACCTGTAGAATACATGGA
TGTCATGGGAGGGTCCGCATCAGCCAGTGCCTGCTCATCATACCAGCAAA
GCCCATGTGCATCCTACAATCCCAGTCCTGGCTCATCTTCCTTTCCAAGT
CCACGGTCTTCTCATTACACACCTCATGCTAATGGTAGTGCTGATGCCAA
TTCACTCATCCCATGGCTCAAAAACCTTTCATCTAGCTCATCATCAGCTT
CATCCAAGGACCCCCACCATATGTACATTCATGGAGGTTCCATAAGTGCT
CCAGTCACCCCTCCGCTGAGTTCCCCAACCTGCCGAACTCCTCGAACAAA
AAATGACTGGGATGAACCAACTGCTGTTGCTGCTTGGGCTGGTCAGCACT
ATCCTTTCTTGCCTTCTTCCACCCCACCAAGTCCTGGCCGTCAGGTCCTG
CCTGATTCAGGATGGCTATCAGGCATCCAAATTCCCCAGAGTGGGCCATC
ATCACCTACATTTAGCCTGGTTTCACGAAATCCTTTTGGGTTCAGGGAAG
AGGTTTTATCAGGTGGACCATCCCGAATGTGGACTCCTGGACAAAGTGGG
ACATGCTCTCCTGCAGTTCCTGCTGGTGTTGATAACACATCAGATGTCCC
AATG
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