FC878907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878907 vs. ExPASy Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.193e-25 Identity = 60/129 (46.51%), Postives = 78/129 (60.47%), Query Frame = 2 Query: 119 AGDP----FHIRGRVYCDTCRCGFETSATTYIQGAHVRIECKDRNSLNLKYSIDGETDSTGTYNIHVDGDHQDQICYSKLISSPLADCKTADPGRACSQVILTRSNGAVSNLHFANALGFLKARPLAFC 493 A DP + I+GRVYCDTCR GF T+ T YI GA VR+ECK + L+ +IDG TD+TGTY I + H++ IC L++SP DC R + V+LTR+ G +L AN LG+ K PL C Sbjct: 27 ADDPNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTGKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLRPANPLGYFKDVPLPVC 155
BLAST of FC878907 vs. ExPASy Swiss-Prot
Match: OLEE1_BETVE (Olee1-like protein OS=Betula verrucosa PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.396e-24 Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 2 Query: 131 FHIRGRVYCDTCRCGFETSATTYIQGAHVRIECKDRNSLNLKYSIDGETDSTGTYNIHVDGDHQDQICYSKLISSPLADCK--TADPG-RACSQVILTRSNGAVSNLHFANALGFLKARPLAFC 493 F + G+VYCD CR F T +TY++GA V +EC++R L YS D ETD +GTY I VDGDH+++IC L S DC + DP + +++ LT++NG + + AN LGF+K +PL C Sbjct: 27 FFVEGKVYCDNCRTQFVTKLSTYMKGAKVSLECRNREGGTLIYSSDSETDKSGTYRIPVDGDHEEEICEIALKKSSDPDCSEVSKDPFLKKSARISLTKNNGISTPVRLANPLGFMKKKPLPEC 150
BLAST of FC878907 vs. ExPASy Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.019e-22 Identity = 50/130 (38.46%), Postives = 78/130 (60.00%), Query Frame = 2 Query: 119 AGDPFHIRGRVYCDTCRCGFETSATTYIQGAHVRIECKDRNSLNLKYSIDGETDSTGTYNIHVDGDHQDQICYSKLISSPLADCKTADP---GRACSQVILTRSNGAVSNLHFANALGFLKARPLAFCPE 499 A + F ++G VYCDTCR F T +T ++GA V++EC++ + + + TD G Y+I V+GD +D IC +L+ SP ++C + ++V LT +NG S++ ANALGF++ PL CPE Sbjct: 26 AENHFKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRSANALGFMRKEPLKECPE 155
BLAST of FC878907 vs. ExPASy Swiss-Prot
Match: LAT52_SOLLC (Anther-specific protein LAT52 OS=Solanum lycopersicum GN=LAT52 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.121e-19 Identity = 44/123 (35.77%), Postives = 75/123 (60.98%), Query Frame = 2 Query: 131 FHIRGRVYCDTCRCGFETSATTYIQGAHVRIECKDRNSLNLKYSIDGETDSTGTYNIHVDGDHQDQICYSKLISSPLADCKTADPGRACSQVILTRSNGAVSNLHFANALGFLKARPLAFCPE 499 F + G+VYCDTCR FET + ++GA V+++C++ ++ +S++G TD G Y + V+GDH++ IC ++ SP DCK + G +++ + + G + + FAN L F+KA + C E Sbjct: 27 FDVEGKVYCDTCRVQFETKLSENLEGATVKLQCRNISTEAETFSVEGVTDKDGKYKLTVNGDHENDICEVTVVKSPREDCKESVSGYEKARIECSDNVGIHNAVRFANPLFFMKAESVQGCKE 149
BLAST of FC878907 vs. ExPASy Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.911e-19 Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 2 Query: 122 GDPFHIRGRVYCDTCRCGFETSATTYIQGAHVRIECKDRNSLNLKYSIDGETDSTGTYNIHVDGDHQDQICYSKLISSPLADCKTADPGRACSQVILTRSNG-AVSNLHFANALGFLKARPLAFC 493 G F + GRVYCD CR GFET+ + +QGA V ++C+ N K + TD G Y I +D DHQ++IC L SP C + R ++V LT +NG + +AN + F + PL C Sbjct: 3 GPGFVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEIDQDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLKEC 127
BLAST of FC878907 vs. ExPASy Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.049e-17 Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = 2 Query: 122 GDPFHIRGRVYCDTCRCGFETSATTYIQGAHVRIECKDRNSLNLKYSIDGETDSTGTYNIHVDGDHQDQICYSKLISSPLADCKTADPGRACSQVILTRSNG-AVSNLHFANALGFLKARPLAFC 493 G F + GRVYCD CR GFET+ + ++GA V ++C+ + K + TD G Y I +D DHQ++IC L SP C + R ++V LT + G + +AN + F + PL C Sbjct: 3 GPGFVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEIDQDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLKEC 127
BLAST of FC878907 vs. ExPASy Swiss-Prot
Match: LIGV1_LIGVU (Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.160e-16 Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 2 Query: 131 FHIRGRVYCDTCRCGFETSATTYIQGAHVRIECKDRNSLNLKYSIDGETDSTGTYNIHVDGDHQDQICYSKLISSPLADC---KTADPGRACSQVILTRSNGAVSNLHFANALGFLKARPLAFCPE 499 F+I+G+VYCDTCR F T + +I GA VR++CKD + + ++ G T + G YN+ ++ DH+++ C LISS DC T + + +L NG + N LGFLK L CP+ Sbjct: 11 FYIQGQVYCDTCRARFITELSEFIPGAGVRLQCKDGENGKVTFTEVGYTKAEGLYNMLIERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTTRTI---NPLGFLKKEVLPKCPQ 133
BLAST of FC878907 vs. ExPASy Swiss-Prot
Match: ALL1_OLEEU (Major pollen allergen OS=Olea europaea PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.160e-16 Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 131 FHIRGRVYCDTCRCGFETSATTYIQGAHVRIECKDRNSLNLKYSIDGETDSTGTYNIHVDGDHQDQICYSKLISSPLADCKTADPGRACSQVILTRSNGAVSNLHFANALGFLKARPLAFCPE 499 FHI+G+VYCDTCR GF T + +I GA +R++CKD+ + ++ ++ G T + G Y++ V+ DH+++ C LISS DC + + N N LGF K L C + Sbjct: 11 FHIQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSMLVERDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTVNPLGFFKKEALPKCAQ 133 The following BLAST results are available for this feature:
BLAST of FC878907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878907 ID=FC878907; Name=FC878907; organism=Citrus clementina; type=EST; length=648bpback to top |