FC878908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.940e-36 Identity = 72/202 (35.64%), Postives = 124/202 (61.39%), Query Frame = 3 Query: 159 ESKKIWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMPFYIFATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAKLNYGIVGAAIAGDISLWLMVVGLVVYV 764 ESK +W ++G I+ S + ++FVT F GHLG ++ A S+ I+G YGIMLGM SA++T+ GQA GA ++ +GI QR+ ++ A A+ L Y ++ P LK + Q I+ +++ ++PQ++A+A+ P+Q+FLQ+Q+ V + +S+ + H L W++ L++G++GAA+ S WL+V +Y+ Sbjct: 51 ESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYI 252
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.253e-21 Identity = 60/204 (29.41%), Postives = 102/204 (50.00%), Query Frame = 3 Query: 153 WNESKKIWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMPFYIFATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAKLNYGIVGAAIAGDISLWLMVVGLVVYV 764 W E++++ +A P L+ F I+ V++ F GHLG+VE AVS+ +I + G+ A +TL Q G ++GI LQR ++ I L L QD E+S+L Y +P L A + + K+LQ+Q ++ + A IF+ N+IL+ L G++G+A A +S ++ ++ L +Y+ Sbjct: 46 WQEAQQLLALAAPAFLSQLMIFLISIVSSIFCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYI 249
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.032e-20 Identity = 59/202 (29.21%), Postives = 98/202 (48.51%), Query Frame = 3 Query: 159 ESKKIWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMPFYIFATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAKLNYGIVGAAIAGDISLWLMVVGLVVYV 764 E ++ ++AGPV ++ F I+FV+ F GHLG+ E A V++ VI I G+ SA +TL Q G+ +G+ LQR ++ I P L + Q ++ L+ Y K +P L A + ++LQ+Q +W + A I + +N++ + L G+ G+A A IS + + V L VY+ Sbjct: 52 EIVELLKLAGPVFISQLMIFLISFVSTVFCGHLGKTELAGVALAIAVINVTGISIGSGLASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPAAFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYI 253
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.877e-20 Identity = 64/205 (31.22%), Postives = 106/205 (51.71%), Query Frame = 3 Query: 159 ESKKIWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMP---FYIFATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAKLNYGIVGAAIAGDISLWLMVVGLVVYV 764 E+ + +AGPV LA F I+ V++ F GHLG+VE AV++ +V+ + G+ SA +TL Q+ G +G+ LQR ++ LC P ++ L LL QD +++ LA Y +P L A + ++LQSQ + ++ +AA + +V +N L+ L+ G+VG+A A S + + L +YV Sbjct: 43 EAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILI---LLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPAAFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYV 244
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.613e-19 Identity = 65/223 (29.15%), Postives = 112/223 (50.22%), Query Frame = 3 Query: 120 LGSHKNFRERSW-NESKKIWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMPFYIF-----ATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAK--LNYGIVGAAIAGDISLWLMVVGLVVYV 764 L ++F ++W E + + A PV+L S ++ T +GHLG+ E AA S+ + I G+ SAL+T+ Q+ G+G ++M+G++LQR + L L+ F IF L L QD A KY + ++ AYA+ +++FLQ Q +T I + ++FLN++ V + +G +GA +A ++LW L++Y+ Sbjct: 82 LSVQEDFNSKAWWKELTLLIKFATPVVLTSLLQYGEVVTTVFSLGHLGKTELAAASLSNMTATITAFAIYQGIVSALDTVGTQSFGSGNYEMVGLHLQRILAI-----LLLIQFPIFLIWWKIEGILLFLRQDPLTCMFAAKYMRVMMLASPAYALFEALKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGAPVAVALTLWSACAVLIIYI 299
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19 Identity = 61/205 (29.76%), Postives = 104/205 (50.73%), Query Frame = 3 Query: 159 ESKKIWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMP---FYIFATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAKLNYGIVGAAIAGDISLWLMVVGLVVYV 764 E + + +AGP LA F I+F+++ F GHLG++E AV++ VI + G+ SA +TL Q G+ +G+ LQR ++ LC P +I L L QD ++S L Y +P L A + + K+L +Q V M +AA + + N++ + L+ G++G+A+A IS + + + L +Y+ Sbjct: 34 ELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLI---LLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYI 235
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.822e-19 Identity = 57/204 (27.94%), Postives = 100/204 (49.02%), Query Frame = 3 Query: 153 WNESKKIWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMPFYIFATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAKLNYGIVGAAIAGDISLWLMVVGLVVYV 764 W+E++ ++ ++GP+ L F V F GHLG+VE A+V++ + + G+ SA +TL Q+ G+ +G+ LQR ++ L ++ L L QD +S L Y+ +P L A + S + K+LQ+Q VW + + + N+ LV+ LN G+ G+A A IS ++ L +++ Sbjct: 57 WDEARALFVLSGPLFLFQVLNFLTYVVGTVFCGHLGKVELASVTLGVAFVNVCGVSVGAGLSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGLPAIFLYSLLAKYLQNQGIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANTISQFVQAAFLFLHI 260
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.822e-19 Identity = 60/205 (29.27%), Postives = 105/205 (51.22%), Query Frame = 3 Query: 159 ESKKIWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMP---FYIFATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAKLNYGIVGAAIAGDISLWLMVVGLVVYV 764 E + + +AGP LA F I+F+++ F GHLG++E AV++ VI + G+ SA +TL Q G+ +G+ LQR ++ LC P +I L L QD ++S L Y +P L A + + K+L +Q V + +AA + + N++ + +L+ G++G+A+A IS + + + L +Y+ Sbjct: 33 ELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLI---LLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYI 234
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 57/198 (28.79%), Postives = 97/198 (48.99%), Query Frame = 3 Query: 171 IWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMPFYIFATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAKLNYGIVGAAIAGDISLWLMVVGLVVYV 764 ++ ++GP+ L F I V+ F GHLG+VE A+V++ + + +G+ SA +TL Q+ G+ +G+ LQR +V L ++ L L QD E+S L Y +P L + + + K+LQ+Q W + + + N+ LV+ LN G+ G+A A IS + V L++Y+ Sbjct: 34 LFALSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYI 231
BLAST of FC878908 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 63/212 (29.72%), Postives = 107/212 (50.47%), Query Frame = 3 Query: 138 FRERSWNESKKIWEIAGPVILASGSEFSITFVTAAFVGHLGEVEFAAVSVVQNVIEGFVYGIMLGMGSALETLSGQAVGAGRFDMLGIYLQRSFIVTGATALCLMP---FYIFATPFLKLLSQDKEISELAGKYSKWIVPQLFAYAINSPIQKFLQSQSRVWVMTMISMAALIFHVFLNWILVAKLNYGIVGAAIAGDISLWLMVVGLVVYV 764 FRE E + + +AGP L F I+F+++ F GHLG++E AV++ VI + G+ SA +TL Q G+ +G+ LQRS +V LC P ++ L L QD ++S L Y +P L A + K+L +Q V + +AA + + N++ + +L+ G++G+A+A IS + + + L +Y+ Sbjct: 31 FRE----ELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALV---LLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYI 235 The following BLAST results are available for this feature:
BLAST of FC878908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878908 ID=FC878908; Name=FC878908; organism=Citrus clementina; type=EST; length=771bpback to top |