FC878915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878915 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.740e-34 Identity = 89/244 (36.48%), Postives = 125/244 (51.23%), Query Frame = 3 Query: 186 VTCALAPDMGVTSRDIVIDKFTNIWALFYVPILCQSTK---------------LPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWL-SRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEKYLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNPMSRAQQSWSNIA 869 VT P GV S D++ID+ N+ + Y P + +P++++FHGG F SA + Y L C+++SVNYR APENP P AY+DG+ +L W+ ++ WL S++ + IFLAGDS+G NIAHNVALR G S V G IL+ P FGG RT SEK L + +++ D YW+ LP G +R+HP NP S +S ++ Sbjct: 53 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS---------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVL--------GNILLNPMFGGNERTESEKSL--DGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVS 277
BLAST of FC878915 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.046e-30 Identity = 85/236 (36.02%), Postives = 119/236 (50.42%), Query Frame = 3 Query: 204 PDMGVTSRDIVIDKFTNIWALFYVPILCQSTK-------------LPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWL-SRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEKYLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNPMSRAQQSWSNIA 869 P GV S D++ID+ TN+ + Y P ++ +P++V+FHGG F SA + Y L G +++SVNYR APEN P AY+DG+ L W+ S WL S++ + IFLAGDS+G NI HNVA+R S V G IL+ P FGG RT SEK L + +++ D YWR LP G +R+HP +P +S ++ Sbjct: 59 PVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWV---------NSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRIDVL--------GNILLNPMFGGTERTESEKRL--DGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLS 275
BLAST of FC878915 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.975e-30 Identity = 75/190 (39.47%), Postives = 105/190 (55.26%), Query Frame = 3 Query: 300 LPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWL-SRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEKYLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNPMSRAQQSWSNI 866 +P+L++FHGG F SA + Y F L G +++SV+YR +PE+ P AY+DG+ +L W+K + WL S + + ++LAGDS+G NIAHNVA+R N KV G IL+ P FGG+ RT SEK L + +++ D YWR LP G +RDHP NP QS + Sbjct: 106 VPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV---------WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEGVKVL--------GNILLHPMFGGQERTQSEKTL--DGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGV 276
BLAST of FC878915 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.414e-27 Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 3 Query: 303 PLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEKYLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNP 833 P++++FHGG F SA+ + Y K + +++SVNYR APE+ P AY+DG+T+L W+ Q GG + +FL+GDS+G NIAH+VA+R + KV G IL+ FGG RT SE+ L + ++L D YW+ LP ++RDHP NP Sbjct: 114 PVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQ--------ARVFLSGDSSGGNIAHHVAVRAADEGVKVC--------GNILLNAMFGGTERTESERRL--DGKYFVTLQDRDWYWKAYLPEDADRDHPACNP 272
BLAST of FC878915 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13 Identity = 47/126 (37.30%), Postives = 63/126 (50.00%), Query Frame = 3 Query: 246 FTNIWALFYVPILCQSTKLPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMW-LKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIAHNVALRL 620 F N+ YVP T L Y HGGG+CVGSAA S Y A + +++S NYRLAPE P +ED + +L W L+Q G + + ++GDSAG N+A VA +L Sbjct: 85 FNNVPVRVYVPKRKSKTLRRGLFYIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLRQDVLEKYGVDPE---------RVGVSGDSAGGNLAAAVAQQL 201
BLAST of FC878915 vs. ExPASy Swiss-Prot
Match: AAAD_HUMAN (Arylacetamide deacetylase OS=Homo sapiens GN=AADAC PE=1 SV=4) HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13 Identity = 47/127 (37.01%), Postives = 64/127 (50.39%), Query Frame = 3 Query: 243 KFTNIWALFYVPILCQSTKLPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMW-LKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIAHNVALRL 620 KF NI YVP L Y HGGG+CVGSAA S Y A + +++S NYRLAP+ P +ED + +L W L+++ + G N I ++GDSAG N+A V +L Sbjct: 85 KFNNILVRVYVPKRKSEALRRGLFYIHGGGWCVGSAALSGYDLLSRWTADRLDAVVVSTNYRLAPKYHFPIQFEDVYNALRWFLRKKVLAKYG---------VNPERIGISGDSAGGNLAAAVTQQL 202
BLAST of FC878915 vs. ExPASy Swiss-Prot
Match: LIP2_MORS1 (Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12 Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 3 Query: 288 QSTKLPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIAHNVA 611 +ST +++FHGGGFC+G +HEF T+ + G ++SV+YR+APE P P A +D + WL + + S G S S I L+GDSAG +A VA Sbjct: 154 KSTDEAAMLFFHGGGFCIGDI--DTHHEFCHTVCAQTGWAVVSVDYRMAPEYPAPTALKDCLAAYAWLAEH-SQSLGASP---------SRIVLSGDSAGGCLAALVA 249
BLAST of FC878915 vs. ExPASy Swiss-Prot
Match: YFZ3_SCHPO (AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe GN=SPAC1039.03 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 54/191 (28.27%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 303 PLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEK---YLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNPMSRAQQSWSNI 866 P ++FHGGG+ +G+ + + F + ++A C++++V+YRLAPE+P PA +DG+ +L++ C + D L N + I + G SAG NIA ++ ++ S A PL + +L+ P A + K P+ L A Y R LP + +P ++P S+ N+ Sbjct: 101 PCFLWFHGGGWVLGNI--NTENSFATHMCEQAKCVVVNVDYRLAPEDPFPACIDDGWEALLY--------CYENADTLG--INPNKIAVGGSSAGGNIAAVLSHKVAAS---PANFPPLVLQ--LLVVPVCDNTANAKTHKSWELFENTPQ--LPAAKMMWYRRHYLPNEKDWSNPEASPFFYPDSSFKNV 272 The following BLAST results are available for this feature:
BLAST of FC878915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878915 ID=FC878915; Name=FC878915; organism=Citrus clementina; type=EST; length=870bpback to top |