FC878917

Overview
NameFC878917
Unique NameFC878917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8789 contig Ccv1_Contig8789:1..638. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_ASPFU (Isocitrate lyase OS=Aspergillus fumigatus GN=icl1 PE=3 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.228e-63
Identity = 126/201 (62.69%), Postives = 144/201 (71.64%), Query Frame = 2
Query:   35 EQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            E E Q Y  +V+AVK WWK+ R+   KR YTAE++V KRG L I YPSN  +KK+W +LES    E    S TYG L+P  LTQMAKYL+TVYV             EP PDLADYP NTVP KV QLF AQLFHDRKQR  R+TTPK+QR+ L   +DYLRPI+ADADTGHGGLTAVMKL K+ +E GAAGIHIEDQAPG
Sbjct:    5 EDEDQKYWDDVQAVKAWWKDSRWRYTKRPYTAEQIVAKRGNLKIHYPSNDQSKKLWKILESNF--EKKVASFTYGCLEPTMLTQMAKYLDTVYVSGWQSSSTASSTDEPSPDLADYPMNTVPNKVNQLFMAQLFHDRKQREERITTPKDQRSKLPN-IDYLRPIIADADTGHGGLTAVMKLTKLFIERGAAGIHIEDQAPG 202          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_COCIM (Isocitrate lyase OS=Coccidioides immitis GN=ICL1 PE=2 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 1.603e-63
Identity = 124/201 (61.69%), Postives = 143/201 (71.14%), Query Frame = 2
Query:   35 EQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            EQE Q Y  EVEAVK+WWK+ R+   KR +TAE++V KRG L I YPSN  +KK+W L+E K + +    S TYG LDP  +TQM KYL+TVYV             EP PDLADYP NTVP KV QL+ AQLFHDRKQR  RL  PKE+RA L   +DYL PI+ADADTGHGGLTAVMKL K+ +E GAAGIHIEDQAPG
Sbjct:    6 EQEEQKYWEEVEAVKQWWKDSRWRYTKRPFTAEQIVAKRGNLKIEYPSNVQSKKLWKLVEEKFKTKTA--SFTYGCLDPTMVTQMVKYLDTVYVSGWQSSSTASSTDEPSPDLADYPMNTVPNKVNQLWMAQLFHDRKQREERLRNPKEKRASLAN-IDYLAPIIADADTGHGGLTAVMKLTKLFIERGAAGIHIEDQAPG 203          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_GIBZE (Isocitrate lyase OS=Gibberella zeae GN=ICL1 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 4.665e-63
Identity = 125/205 (60.98%), Postives = 146/205 (71.22%), Query Frame = 2
Query:   23 NIMSEQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            +I  + E + ++ EVEAVK WW + R+ + KR +TAE++V+KRG LPI Y SN  AKK+W +LE   R E    S TYG L+P  +TQMAKYL+TVYV             EPGPDLADYP  TVP KV  LF AQLFHDRKQR  RL+ PKEQRA L   +DYLRPIVADADTGHGGLTAVMKL K+ +E GAAGIHIEDQAPG
Sbjct:   10 SINPDIEDELFQKEVEAVKTWWSDSRWRQTKRPFTAEQIVSKRGYLPIDYASNTQAKKLWKILEH--RFENRDASYTYGCLEPTMVTQMAKYLDTVYVSGWQSSSTASASDEPGPDLADYPYTTVPNKVGHLFMAQLFHDRKQRQERLSVPKEQRANLLN-IDYLRPIVADADTGHGGLTAVMKLTKLFIEKGAAGIHIEDQAPG 211          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_COPC7 (Isocitrate lyase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=ACU-7 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 4.665e-63
Identity = 129/203 (63.55%), Postives = 143/203 (70.44%), Query Frame = 2
Query:   29 MSEQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            MS +  Q + AEV  V+ WWK+PRF+RV R YTA +VV+KRGT+ I YPS+   KK+W LL   A+   G  S TYGALDPVQ+TQMAKYLETVYV             EPGPDLADYPSNTVP KV  LF AQLFHDRKQR  R      + A     +DYLRPIVADADTGHGGLTAVMKL KM VE GAAGIHIEDQAPG
Sbjct:    1 MSSERAQ-FAAEVAEVERWWKSPRFARVNRPYTAADVVSKRGTIKINYPSDVQGKKLWKLLSEHAKN--GTPSHTYGALDPVQVTQMAKYLETVYVSGWQSSSTASSSNEPGPDLADYPSNTVPNKVEHLFMAQLFHDRKQREARSRMSDAELANT-PVIDYLRPIVADADTGHGGLTAVMKLTKMFVEKGAAGIHIEDQAPG 199          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_EMENI (Isocitrate lyase OS=Emericella nidulans GN=acuD PE=1 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 7.957e-63
Identity = 124/201 (61.69%), Postives = 142/201 (70.65%), Query Frame = 2
Query:   35 EQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            E+E Q Y  EV AVK WWK+ R+   KR +TAE++V KRG L I YPSN  AKK+W +LE   + +    S TYG LDP  +TQMAKYL+TVYV             EP PDLADYP NTVP KV  L+ AQLFHDRKQR  R+TTPK+QR  +   VDYLRPI+ADADTGHGGLTAVMKL K+ VE GAAGIHIEDQAPG
Sbjct:    5 EEEDQRYWDEVAAVKNWWKDSRWRYTKRPFTAEQIVAKRGNLKIEYPSNVQAKKLWGILERNFKNKEA--SFTYGCLDPTMVTQMAKYLDTVYVSGWQSSSTASSTDEPSPDLADYPMNTVPNKVNHLWMAQLFHDRKQREERMTTPKDQRHKVAN-VDYLRPIIADADTGHGGLTAVMKLTKLFVERGAAGIHIEDQAPG 202          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_LEPMC (Isocitrate lyase OS=Leptosphaeria maculans GN=ICL1 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.315e-62
Identity = 119/195 (61.03%), Postives = 142/195 (72.82%), Query Frame = 2
Query:   53 YRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            ++ EV  VK+WW + R+   KRT+TAEE+V+KRG L I YPSN+ +KK+W ++E + + +    S TYG LDPV +TQMAKYL+TVYV             EPGPDLADYP  TVP KV  LF AQLFHDRKQR  RLTTPK  RA +   VDYLRPI+ADADTGHGGLTA+MKL K+ +E GAAGIHIEDQAPG
Sbjct:   11 FQKEVAEVKQWWNDSRWRYTKRTFTAEEIVSKRGNLKITYPSNSQSKKLWNIVEHRFKNKD--VSYTYGCLDPVMVTQMAKYLDTVYVSGWQASSTASSTDEPGPDLADYPYTTVPNKVGHLFMAQLFHDRKQREERLTTPKADRAKVAN-VDYLRPIIADADTGHGGLTAIMKLTKLFIEKGAAGIHIEDQAPG 202          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_COPCI (Isocitrate lyase OS=Coprinopsis cinerea GN=ACU-7 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.024e-62
Identity = 127/203 (62.56%), Postives = 143/203 (70.44%), Query Frame = 2
Query:   29 MSEQELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            MS +  Q + +EV  V+ WWK+PRF+RV R YTA +VV+KRGT+ I YPS+   KK+W LL   A+   G  S TYGALDPVQ+T+MAKYLETVYV             EPGPDLADYPSNTVP KV  LF AQLFHDRKQR  R      + A     +DYLRPIVADADTGHGGLTAVMKL KM VE GAAGIHIEDQAPG
Sbjct:    1 MSSERAQ-FASEVAEVERWWKSPRFARVNRPYTAADVVSKRGTIKINYPSDVQGKKLWKLLSEHAKN--GTPSHTYGALDPVQVTKMAKYLETVYVSGWQSSSTASSSNEPGPDLADYPSNTVPNKVEHLFMAQLFHDRKQREARSRMSDAELANT-PVIDYLRPIVADADTGHGGLTAVMKLTKMFVEKGAAGIHIEDQAPG 199          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_PENMA (Isocitrate lyase OS=Penicillium marneffei GN=icl1 PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.501e-61
Identity = 120/199 (60.30%), Postives = 142/199 (71.36%), Query Frame = 2
Query:   41 ELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            E Q Y  +V AVK+WW + R+   KR +TAE++V KRGTL I YPSN  AKK+W +LE +   +    S TYG L+P  LTQM KYL+T+YV             EP PDLADYP NTVP KV QLF AQLFHDRKQR  R+TTP+E+R+ + +  DYLRPI+ADADTGHGGLTAVMKL K+ VE GAAGIHIEDQAPG
Sbjct:    9 EDQKYLEDVNAVKQWWTDSRWRYTKRPFTAEQIVAKRGTLKIEYPSNTQAKKLWKILEERFNDKT--VSYTYGCLEPTMLTQMIKYLDTIYVSGWQSSSTASSTDEPSPDLADYPMNTVPNKVNQLFMAQLFHDRKQREERITTPREKRSSV-QNYDYLRPIIADADTGHGGLTAVMKLTKLFVERGAAGIHIEDQAPG 204          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_MAGGR (Isocitrate lyase OS=Magnaporthe grisea GN=ICL1 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.343e-61
Identity = 117/195 (60.00%), Postives = 141/195 (72.31%), Query Frame = 2
Query:   53 YRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            +  EV  VK+WW +PR+   KR +TAE++V+KRG L I YPSNA +KK+W +LE   R +    S TYG L+P  +TQMAKYL+TVYV             EPGPDLADYP  TVP KV+ LF AQLFHDRKQR  RL+ PK +R+ L + +DYLRPI+ADADTGHGGLTAVMKL K+ +E GAAGIHIEDQAPG
Sbjct:   20 FAREVAEVKQWWSDPRWRYTKRPFTAEQIVSKRGNLKIEYPSNAQSKKLWKILEG--RFQKRDASYTYGCLEPTMVTQMAKYLDTVYVSGWQSSSTASSSDEPGPDLADYPYTTVPNKVSHLFMAQLFHDRKQRHERLSAPKSERSKL-QNIDYLRPIIADADTGHGGLTAVMKLTKLFIEKGAAGIHIEDQAPG 211          
BLAST of FC878917 vs. ExPASy Swiss-Prot
Match: ACEA_NEUCR (Isocitrate lyase OS=Neurospora crassa GN=acu-3 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 9.726e-61
Identity = 119/199 (59.80%), Postives = 140/199 (70.35%), Query Frame = 2
Query:   41 ELQAYRAEVEAVKEWWKNPRFSRVKRTYTAEEVVNKRGTLPIAYPSNAMAKKMWALLESKARGEGGGCSMTYGALDPVQLTQMAKYLETVYVXXXXXXXXXXXXLEPGPDLADYPSNTVPLKVAQLFTAQLFHDRKQRFTRLTTPKEQRAGLGKPVDYLRPIVADADTGHGGLTAVMKLAKMMVEAGAAGIHIEDQAPG 637
            E + +  EVE VK+WW + R+ + KR +TAE++V+KRG L I Y SNA AKK+W +LE +        S TYG L+P  +TQMAKYL+TVYV             EPGPDLADYP  TVP KV  LF AQLFHDRKQR  RL+ PK+QR  L   +DYLRPIVADADTGHGGLTAVMKL K+ +E GAAGIHIEDQAPG
Sbjct:   16 EDELFAKEVEEVKKWWSDSRWRQTKRPFTAEQIVSKRGNLKIEYASNAQAKKLWKILEDRFAKRDA--SYTYGCLEPTMVTQMAKYLDTVYVSGWQSSSTASSSDEPGPDLADYPYTTVPNKVGHLFMAQLFHDRKQRQERLSVPKDQREKLAN-IDYLRPIVADADTGHGGLTAVMKLTKLFIEKGAAGIHIEDQAPG 211          
The following BLAST results are available for this feature:
BLAST of FC878917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
ACEA_ASPFU1.228e-6362.69Isocitrate lyase OS=Aspergillus fumigatus GN=icl1 ... [more]
ACEA_COCIM1.603e-6361.69Isocitrate lyase OS=Coccidioides immitis GN=ICL1 P... [more]
ACEA_GIBZE4.665e-6360.98Isocitrate lyase OS=Gibberella zeae GN=ICL1 PE=3 S... [more]
ACEA_COPC74.665e-6363.55Isocitrate lyase OS=Coprinopsis cinerea (strain Ok... [more]
ACEA_EMENI7.957e-6361.69Isocitrate lyase OS=Emericella nidulans GN=acuD PE... [more]
ACEA_LEPMC2.315e-6261.03Isocitrate lyase OS=Leptosphaeria maculans GN=ICL1... [more]
ACEA_COPCI3.024e-6262.56Isocitrate lyase OS=Coprinopsis cinerea GN=ACU-7 P... [more]
ACEA_PENMA1.501e-6160.30Isocitrate lyase OS=Penicillium marneffei GN=icl1 ... [more]
ACEA_MAGGR3.343e-6160.00Isocitrate lyase OS=Magnaporthe grisea GN=ICL1 PE=... [more]
ACEA_NEUCR9.726e-6159.80Isocitrate lyase OS=Neurospora crassa GN=acu-3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ2YA13RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ2YA13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878917 ID=FC878917; Name=FC878917; organism=Citrus clementina; type=EST; length=638bp
AACATTCTCATCGAGACCCTCGAACATCATGTCCGAACAAGAACTCCAAG
CTTACCGAGCCGAAGTGGAAGCCGTCAAAGAATGGTGGAAGAACCCCCGT
TTCTCCAGAGTCAAACGGACCTATACAGCAGAAGAGGTCGTCAACAAGCG
CGGCACCCTACCTATCGCTTATCCGTCGAACGCGATGGCCAAGAAGATGT
GGGCGCTTTTGGAGAGTAAAGCGAGGGGGGAAGGGGGCGGGTGTAGTATG
ACTTATGGCGCCCTCGACCCCGTCCAACTCACCCAGATGGCCAAATACCT
AGAAACAGTCTACGTATCAGGCTGGCAATCTTCCTCGACCGCCTCCTCTT
CCCTCGAACCCGGCCCCGACCTCGCGGATTACCCTTCGAATACCGTCCCC
CTGAAGGTGGCGCAGCTGTTCACCGCGCAGCTGTTCCATGATCGGAAACA
GCGGTTTACTAGGTTGACCACCCCGAAGGAACAAAGGGCTGGGTTGGGGA
AGCCGGTTGATTATTTGAGACCTATTGTTGCGGATGCTGATACCGGCCAT
GGTGGACTGACGGCGGTCATGAAATTGGCCAAGATGATGGTCGAAGCCGG
CGCAGCTGGGATTCATATCGAAGATCAAGCACCTGGTA
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