FC878930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_PELPD (Cysteinyl-tRNA synthetase OS=Pelobacter propionicus (strain DSM 2379) GN=cysS PE=3 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 1.393e-97 Identity = 170/276 (61.59%), Postives = 203/276 (73.55%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGHFFT 907 + L+IYN++T +K+ F P+ PGK GMY+CGVT YD H+GHARA V FD++YRYL + Y VTYVRNFTD+DDKII RAN G + ++S RY + + DMA L PT +P+ +DHMG I +I +I AY +GDV++AVE P+Y RLSG+ LE+ AG RV VD RKRNP DFALWK +K GEPSWDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS AA V YWMHNG V N+EKMSKSLG+FFT Sbjct: 1 MALRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYLGYSGYAVTYVRNFTDIDDKIINRANQEGVDYTTISERYIEAFNQDMARLGLAKPTVEPKATDHMGGIISVIETLIAKGHAYESDGDVYYAVESFPSYLRLSGRNLEDMLAGARVEVDDRKRNPMDFALWKGSKPGEPSWDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVFPHHENEIAQSEAANGCQFVRYWMHNGFVNINSEKMSKSLGNFFT 276
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_SYNFM (Cysteinyl-tRNA synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=cysS PE=3 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 9.985e-96 Identity = 164/276 (59.42%), Postives = 204/276 (73.91%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGHFFT 907 + L +YN++T+ KE F P+ PGKV Y+CGVT YDLSH+GHAR+A+ FD++YRYL L +EVTYVRNFTDVDDKIIRRAND G + S++ RY + DM L L P +P ++++ + ++I +++ AY DVFF +EK P YG+LSG+++E+ AG RV VD+RKRNP DF LWK +K GEPSWDSPWGPGRPGWHIECSAM + +L FDIHGGG DLIFPHHENEIAQS AA V YW+HNG V NNEKMSKSLG+F T Sbjct: 1 MVLHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYLRFLGFEVTYVRNFTDVDDKIIRRANDAGTDCRSIAQRYIAAFYEDMDALGVLRPDLEPLATENVPGMIEIIRVLMDKGIAYQAGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEVDARKRNPLDFVLWKGSKPGEPSWDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLIFPHHENEIAQSEAAFGMPFVRYWLHNGFVNINNEKMSKSLGNFLT 276
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_THISH (Cysteinyl-tRNA synthetase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=cysS PE=3 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 3.794e-95 Identity = 167/275 (60.73%), Postives = 208/275 (75.64%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGHFFT 907 L+I+NS+T++KE FTP+ PG+V MY+CG+T YD HLGHAR V FD++YRYL+ L ++VTY+RN TD+DDKIIRRA + GE+ +L++R+ D L LPP+ +PR ++H+ + MI ++ AY + GDV++AV K YGRLSG+RLE+ RAGERVA D KR+P DF LWKAAK GEP+WDSPWGPGRPGWHIECSAMS HYL + FDIHGGG DL FPHHENEIAQS AA + V+YWMHNG V N EKMSKSLG+FFT Sbjct: 2 LQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGFDVTYIRNITDIDDKIIRRAAENGEDIRALTDRFIAAMHEDAEALGVLPPSAEPRATEHIDGMLAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSGKRLEDLRAGERVAPDEAKRDPLDFVLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQFPHHENEIAQSEAATCEHFVNYWMHNGFVRVNEEKMSKSLGNFFT 276
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_PELCD (Cysteinyl-tRNA synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=cysS PE=3 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 4.195e-94 Identity = 158/276 (57.25%), Postives = 205/276 (74.28%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGHFFT 907 ++L++YN+MT +KE F P+ PGKVGMY+CGVT YD H+GHARA V FD++YRYL+ + ++VTYVRN+TDVDDKII+RAN+ G + +L+ + Q + DM L PT QP+ + H+ I +++ ++I+ AY +GDV+F+VE P+Y +LS + ++ R+G R+ +KRNP DFALWKAAK GEPSW+SPWGPGRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS A V YW+HNG V N EKMSKSLG+FFT Sbjct: 1 MSLRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQFIGFDVTYVRNYTDVDDKIIKRANERGISSDTLAGEFIQAFDEDMNRLGLAEPTIQPKATCHIDHIVNLVQRLIDRGIAYESQGDVYFSVEDFPSYLKLSKRNMDEMRSGARITPGEQKRNPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKDLVFPHHENEIAQSEGATGKPFVKYWLHNGFVNVNQEKMSKSLGNFFT 276
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_GEOLS (Cysteinyl-tRNA synthetase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=cysS PE=3 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.221e-93 Identity = 160/276 (57.97%), Postives = 203/276 (73.55%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGHFFT 907 + L++YN+++ +KE F P V GKVGMY+CGVT YD H+GHARA + FD++YRYL Y+VTY+RN+TD+DDKII RAN G + ++++RY + DM L L PT +P+ +DH+ I +I ++I+N AY V+GDV+FAVE P Y +LSG+ L++ AG RV VD RKRNP DFALWK +K GEP W+SPWG GRPGWHIECSAMS +L FDIHGGG DL+FPHHENEIAQS A V YW+HNG V N+EKMSKSLG+FFT Sbjct: 1 MALRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLRFSGYDVTYIRNYTDIDDKIINRANQEGTDYRTIADRYIATFDEDMDRLGMLRPTIEPKATDHIEDIISIIQRLIDNGHAYAVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVDERKRNPMDFALWKGSKPGEPWWESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDLVFPHHENEIAQSEGANGCQFVKYWLHNGFVNINSEKMSKSLGNFFT 276
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_ALHEH (Cysteinyl-tRNA synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=cysS PE=3 SV=2) HSP 1 Score: 341.658 bits (875), Expect = 3.551e-93 Identity = 165/275 (60.00%), Postives = 200/275 (72.73%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGHFFT 907 L I+NS+TQ+KE F PI PG V MY+CG+T YD HLGHARA V FD++ RYL HL Y VT+VRN TD+DDKIIRRA +LGE +++ R+ + D L LPP ++PR + H+ I MI +++ AYV + GDV+FAV P YG+LSG+R E+ RAG RV VD KR+P DFALWKAA+ GEP+W SPWG GRPGWHIECSAMS L FDIHGGG+DL FPHHENEIAQS A V+YWMHNGHV N+EKM+KSLG+FFT Sbjct: 2 LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGYRVTFVRNITDIDDKIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFPHHENEIAQSECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFT 276
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_HELMI (Cysteinyl-tRNA synthetase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=cysS PE=3 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 4.638e-93 Identity = 159/277 (57.40%), Postives = 205/277 (74.01%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGHFFT 907 ++L++YN+++++KE F P G+VGMY+CG T YD HLG+AR V FD + RYLEH+ YEV Y++NFTD+DDKII RA ++GE+P++++ R+ +EY D L P T P+VS HM +I MI ++ AY + GDV+F++ +YG+LSG+ LE+ +AG RV V+ RKR+P DFALWK AK GEPSWDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS A S ++ YW+HNG +T N EKMSKSLG+FFT Sbjct: 1 MSLRVYNTLSREKETFVPHKAGRVGMYVCGPTTYDYIHLGNARPLVVFDTIRRYLEHVGYEVVYIQNFTDIDDKIIHRAKEIGEDPIAMAARFVEEYYRDAKALNVRPATIHPKVSAHMAEIIAMIGVLVEKGHAYELGGDVYFSIPSFKDYGKLSGRSLEDLQAGARVDVNERKRHPMDFALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSRKYLGDAFDIHGGGQDLIFPHHENEIAQSEACTGTSPMARYWLHNGFITVNQEKMSKSLGNFFT 277
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_SHELP (Cysteinyl-tRNA synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=cysS PE=3 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 1.033e-92 Identity = 159/275 (57.82%), Postives = 199/275 (72.36%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGHFFT 907 LK+YNS+T+QKE F PI PGKVGMY+CGVT YDL H+GH R V+FD++ RYL ++ Y+V + RN TDVDDKII+RA + GE+ +L+ R QE D L P ++PR + HM +I +M+ +++ D AY+ + GDV F+V P YGRLSGQ L+ +AG RV VD KR+P DF LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSL +FFT Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYDVNFHRNITDVDDKIIKRATENGESCDALTERLTQEMYHDFDALNMKRPDFEPRATQHMPEIIEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVDENKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFT 276
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_PELTS (Cysteinyl-tRNA synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=cysS PE=3 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 1.350e-92 Identity = 163/273 (59.71%), Postives = 198/273 (72.53%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGHFF 904 ++IYN++T++KE F P PG+V MY+CG T Y+ HLG+AR V FD + RYL H YEV +V+NFTDVDDKII RA + G++PL+L+ RY EY D L P VS+H+ I M+ +++ AYVV+G+V+F V K YG+LSG+ LE+ +AG RV VD RKR+P DFALWKAAK GEP WDSPWGPGRPGWHIECSAMS YL + FDIHGGG DLIFPHHENEIAQS AA V YWMHNG +T N EKMSKSLG+FF Sbjct: 1 MEIYNTLTRRKENFQPREPGRVCMYVCGPTTYNYIHLGNARPLVFFDTVRRYLIHKGYEVLFVQNFTDVDDKIINRAQEEGDDPLALARRYIGEYFKDADALNVRRADRHPLVSEHIPDIIKMVDELVKKGAAYVVDGNVYFEVRKFAGYGKLSGRTLEDMQAGARVEVDPRKRDPLDFALWKAAKPGEPCWDSPWGPGRPGWHIECSAMSLKYLGTNFDIHGGGYDLIFPHHENEIAQSEAATGQPFVRYWMHNGFITVNEEKMSKSLGNFF 273
BLAST of FC878930 vs. ExPASy Swiss-Prot
Match: SYC_GEOMG (Cysteinyl-tRNA synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=cysS PE=3 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 3.006e-92 Identity = 158/276 (57.25%), Postives = 203/276 (73.55%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGHFFT 907 ++L++YN+++ KE FTP+VPG+V MY+CGVT YD H+GHARA V FD++YRYL H Y+VTYVRN+TDVDDKII RAN G ++S R+ E+ DMA L PT+QP+ ++H+ ++ D+I+++I AY +GDV+F VEK Y +LS + L+ +AG R+ V +KR+P DFALWK +K GEP W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS AA YW+HNG V N+EKMSKSLG+FFT Sbjct: 1 MSLRVYNTLSGTKEEFTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYDVTYVRNYTDVDDKIINRANQEGVPYNAISERFIAEFDRDMAALGLDLPTHQPKATEHIAEMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVGEKKRHPMDFALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQSEAANGKPFAHYWIHNGFVNINSEKMSKSLGNFFT 276 The following BLAST results are available for this feature:
BLAST of FC878930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878930 ID=FC878930; Name=FC878930; organism=Citrus clementina; type=EST; length=907bpback to top |