FC878931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 4.866e-42 Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 2 Query: 242 TSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIM 451 TSNGDVF KTHDELD EFLGN+ GKPWRFQTN YGNGST RGREERY+LWFDP+K+FHRYSILWT + I+ Sbjct: 97 TSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKII 166 HSP 2 Score: 60.4622 bits (145), Expect = 4.866e-42 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 3 Query: 15 GSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYVSGNSL 134 GSGF+SS +Y HGF+S+MIKLP+D+TAG+ VAFY S + Sbjct: 63 GSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDV 102
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.165e-40 Identity = 56/70 (80.00%), Postives = 61/70 (87.14%), Query Frame = 2 Query: 242 TSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIM 451 TSNGDVF K HDELD EFLGN+ GKPWRFQTN YGNGST RGREERY+LWFDP+K+FHRYSILWT I+ Sbjct: 105 TSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKII 174 HSP 2 Score: 59.6918 bits (143), Expect = 1.165e-40 Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = 3 Query: 15 GSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYVSGNSLSIK 143 GSGF+SS +Y HGFFS++IKLP +TAG+ VAFY S + +K Sbjct: 71 GSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVK 113
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 5.978e-36 Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 2 Query: 245 SNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIM*VFF 463 SNGD++ K HDE+DFEFLGN+ K WR QTN YGNGST GREERY LWFDPT+ FH+YSILW+ ++I +FF Sbjct: 97 SNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHI--IFF 167 HSP 2 Score: 58.9214 bits (141), Expect = 5.978e-36 Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 3 Query: 15 GSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYVSGNSL 134 GSGFVS+ Y HGFFSA IKLPSD+TAG+ VAFY+S + Sbjct: 62 GSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDM 101
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.721e-35 Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 2 Query: 245 SNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIM 451 SNGD++ K HDE+DFEFLGN+ G+ WR QTN YGNGST GREERY LWFDPT+ FH+YSILW+ ++I+ Sbjct: 97 SNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHII 165 HSP 2 Score: 56.6102 bits (135), Expect = 1.721e-35 Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 3 Query: 15 GSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYVSGNSL 134 GSGFVS+ +Y HGFFS+ IKLP+D++AG+ +AFY+S L Sbjct: 62 GSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDL 101
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 6.100e-21 Identity = 45/100 (45.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 245 SNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTAR---GREERYQLWFDPTKQFHRYSILWTSNNIM*VFFS*QTCFQGYNTLQSG*Y-TRPNYL 532 SN P HDE+D EFLG GKP+ QTN + GS R GRE ++ LWFDPT+ FH Y+ILW N I VFF + YN + TRP ++ Sbjct: 103 SNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQI--VFFVDDVPIRTYNRKNEAIFPTRPMWV 200 HSP 2 Score: 38.891 bits (89), Expect = 6.100e-21 Identity = 19/40 (47.50%), Postives = 24/40 (60.00%), Query Frame = 3 Query: 9 SLGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYVSGN 128 S GSGF S + Y G+F A IKL TAG+ + Y+S N Sbjct: 66 STGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNN 105
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.841e-20 Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 245 SNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGS---TARGREERYQLWFDPTKQFHRYSILWTSNNIM 451 SN + P HDE+D EFLG GKP+ QTN Y GS GRE +++LWFDPTK FH Y+ILW+ I+ Sbjct: 107 SNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREII 178 HSP 2 Score: 38.891 bits (89), Expect = 3.841e-20 Identity = 18/38 (47.37%), Postives = 24/38 (63.16%), Query Frame = 3 Query: 15 GSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYVSGN 128 GSGF S K + G+F A IKL +TAG+ + Y+S N Sbjct: 72 GSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNN 109
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.420e-19 Identity = 38/70 (54.29%), Postives = 44/70 (62.86%), Query Frame = 2 Query: 242 TSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIM 451 TS GD THDE+DFEFLGN GKP QTN + NG GRE+++ WFDPT FH Y ILW I+ Sbjct: 98 TSKGD----THDEVDFEFLGNRQGKPIAIQTNVFSNGQ--GGREQKFVPWFDPTTSFHTYGILWNPYQIV 161 HSP 2 Score: 39.6614 bits (91), Expect = 2.420e-19 Identity = 19/38 (50.00%), Postives = 23/38 (60.53%), Query Frame = 3 Query: 9 SLGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYVS 122 S GSGF S Y GFF IKLP +AG+ AFY++ Sbjct: 61 SSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLT 98
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 2 Query: 245 SNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNN 445 SN + +PK+HDE+D E LG W QTN Y NGST GREE++ WFDPT+ FH Y+++W S++ Sbjct: 107 SNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHH 173
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13 Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 272 HDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIM 451 H+E DFEFLGN G+P+ QTN Y NG RE+R LWFDPT +FH YSILW+ +++ Sbjct: 99 HNEFDFEFLGNTTGEPYIVQTNIYVNG--VGNREQRLNLWFDPTTEFHTYSILWSKRSVV 156
BLAST of FC878931 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 275 DELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIM*VFF 463 DE+DFEFLGN G+P+ QTN Y NG+ RE R+ LWFDPTK +H YSILW NN VFF Sbjct: 101 DEIDFEFLGNRTGQPYIIQTNVYKNGTG--NREMRHSLWFDPTKDYHTYSILW--NNHQLVFF 159 The following BLAST results are available for this feature:
BLAST of FC878931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878931 ID=FC878931; Name=FC878931; organism=Citrus clementina; type=EST; length=888bpback to top |