FC878934

Overview
NameFC878934
Unique NameFC878934
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length799
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC878934 vs. ExPASy Swiss-Prot
Match: Y2349_ARATH (Uncharacterized protein At2g33490 OS=Arabidopsis thaliana GN=At2g33490 PE=1 SV=2)

HSP 1 Score: 332.028 bits (850), Expect = 2.294e-90
Identity = 176/223 (78.92%), Postives = 189/223 (84.75%), Query Frame = 1 
Query:  130 MKTSLRRWRGFTLHKHGDSKDRRDLRPLAQLDELAQASQDMQDMRGCYDXXXXXXXXXXXXXYEFSESLQELGACLLEKTALNDNEESGKVLLMLGKVQFELQKLVDAYRSHIFQTITIPSESLLNELQTVEEMKRQCDEKRNVCEYMLMRQREKGRSKNGKGETFSLQQLQEAHDEYDQEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLSFVKKALKSLE 798
            MKTSLRR RG  LHKH +SKDRRDLR L Q DELAQASQD++DMR CYD             YEFSESL+ELGACLLEKTALND+EESG+VL+MLGK+QFELQKLVD YRSHIFQTITIPSESLLNEL+ VEEM+R CDEKRNV E ML RQREKGRSK GKGETFS QQLQEAHD+Y+ E TLFVFRLKSLKQGQ+RSLLTQAARHHAAQL F KKAL SLE
Sbjct:    1 MKTSLRRLRG-VLHKH-ESKDRRDLRALVQKDELAQASQDVEDMRDCYDSLLNAAAATANSAYEFSESLRELGACLLEKTALNDDEESGRVLIMLGKLQFELQKLVDKYRSHIFQTITIPSESLLNELRIVEEMQRLCDEKRNVYEGMLTRQREKGRSKGGKGETFSPQQLQEAHDDYENETTLFVFRLKSLKQGQTRSLLTQAARHHAAQLCFFKKALSSLE 221
The following BLAST results are available for this feature:
BLAST of FC878934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2349_ARATH2.294e-9078.92Uncharacterized protein At2g33490 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ2YA16RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ2YA16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878934 ID=FC878934; Name=FC878934; organism=Citrus clementina; type=EST; length=799bp
AAGAATGATTGTATTTCACTTTGAATTTCAGAGCTAACAGATAATAGGAG
AATTATATTCGAGACTTGAGAGAGGATTTCATTTTTCATTTCCATTTCGT
GAGGATACGAAAAAGGTTAAAAATCGAAAATGAAGACGTCGCTGAGACGA
TGGCGAGGATTCACACTCCACAAGCACGGCGATTCCAAGGACCGGCGAGA
TCTTCGGCCTCTGGCTCAATTGGACGAGCTCGCTCAGGCTTCTCAGGACA
TGCAGGACATGAGGGGCTGTTATGATAGCTTACTTTCAGCAGCTGCAGCG
ACTGCTAATAGTGCTTATGAATTCTCCGAGTCATTACAGGAACTGGGTGC
CTGTCTTCTTGAGAAAACTGCACTGAATGATAACGAAGAAAGTGGCAAAG
TCTTGTTAATGCTGGGAAAAGTGCAGTTTGAACTTCAGAAACTTGTTGAT
GCATACCGCTCTCACATTTTCCAGACAATCACAATTCCATCAGAGTCTCT
TCTTAATGAGCTTCAGACTGTTGAGGAGATGAAGCGACAATGTGATGAAA
AAAGAAACGTATGTGAGTACATGTTGATGAGGCAGAGAGAAAAAGGGAGG
TCAAAAAATGGGAAAGGAGAAACATTTTCGCTGCAGCAGTTGCAAGAAGC
TCATGATGAGTATGATCAGGAGGCAACCTTATTTGTTTTTCGTTTGAAAT
CTCTGAAGCAAGGACAATCACGAAGTCTTCTTACACAGGCAGCTCGGCAC
CATGCTGCTCAGTTGAGCTTTGTCAAGAAGGCTCTTAAGTCTCTTGAGG
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