FC878939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878939 vs. ExPASy Swiss-Prot
Match: CKX5_ARATH (Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 5.595e-91 Identity = 177/263 (67.30%), Postives = 204/263 (77.57%), Query Frame = 1 Query: 61 ASKLLLTFAICRLIVTVGLTMDPTELLRLG---VYGQLSVDPSDVQTASLDFGML-SRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTS-NGVVIQMXXXXXXXXXXXTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFSTLPE 834 +S LLLTFAIC+LI+ VGL + P+ELLR+G V G +V PSD+ + S DFGML S EP AVLHP+SA+D+ R+V+ AY S A F +SARGHGHSINGQA NGVV++M TP +P V E YVDVWGGELW+DVL+ TLEHGLAPKSWTDYLYL+VGGTLSNAGISGQAFH GPQI+NV ELDVVTGKGE++ CSEE+N+ LFH VLGGLGQFGIITRARISLEPAP+RVRWIRVLYS F E Sbjct: 7 SSFLLLTFAICKLIIAVGLNVGPSELLRIGAIDVDGHFTVHPSDLASVSSDFGMLKSPEEPLAVLHPSSAEDVARLVRTAYGS-ATAFPVSARGHGHSINGQAAAGRNGVVVEMNHGVTG-----TP---KPLVRPDEMYVDVWGGELWVDVLKKTLEHGLAPKSWTDYLYLTVGGTLSNAGISGQAFHHGPQISNVLELDVVTGKGEVMRCSEEENTRLFHGVLGGLGQFGIITRARISLEPAPQRVRWIRVLYSSFKVFTE 260 HSP 2 Score: 23.0978 bits (48), Expect = 5.595e-91 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 825 FTRDQEYLISL 857 FT DQEYLIS+ Sbjct: 258 FTEDQEYLISM 268
BLAST of FC878939 vs. ExPASy Swiss-Prot
Match: CKX1_ARATH (Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 1.755e-65 Identity = 130/233 (55.79%), Postives = 166/233 (71.24%), Query Frame = 1 Query: 130 TELLRLGVYGQLSVDPSDVQTASLDFGMLSRAEPWAVLHPASADDITRVVK-AAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMXXXXXXXXXXXTPAALRPHVYE-KERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFS 822 + L+ L + G +S D DV + DFG + P A+LHP S DI+ ++K + T++ARGHGHS+ GQA GVVI+M +Y+ K+ YVDV GGE+WI++LR TL++GL+PKSWTDYL+L+VGGTLSNAGISGQAF GPQI NV++L++VTGKGE++TCSE++NS LF +VLGGLGQFGIITRARISLEPAP V+WIRVLYSDFS Sbjct: 57 SSLVSLDLEGYISFD--DVHNVAKDFGNRYQLPPLAILHPRSVFDISSMMKHIVHLGSTSNLTVAARGHGHSLQGQALAHQGVVIKMESLRSPDI----------RIYKGKQPYVDVSGGEIWINILRETLKYGLSPKSWTDYLHLTVGGTLSNAGISGQAFKHGPQINNVYQLEIVTGKGEVVTCSEKRNSELFFSVLGGLGQFGIITRARISLEPAPHMVKWIRVLYSDFS 277 HSP 2 Score: 23.483 bits (49), Expect = 1.755e-65 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 816 FFNFTRDQEYLIS 854 F F+RDQEYLIS Sbjct: 276 FSAFSRDQEYLIS 288
BLAST of FC878939 vs. ExPASy Swiss-Prot
Match: CKX1_MAIZE (Cytokinin dehydrogenase 1 OS=Zea mays GN=CKX1 PE=1 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 2.946e-62 Identity = 121/232 (52.16%), Postives = 159/232 (68.53%), Query Frame = 1 Query: 127 PTELLRLGVYGQLSVDPSDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMXXXXXXXXXXXTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFS 822 P L L + G+L D + AS DFG ++ A P AVL+P+S D+ ++ AA + +TI+ RG GHS+ GQA GVV+ M A R +V RYVD G ++WIDVLR++L G+AP+SW DYLYL+VGGTLSNAGISGQAF GPQI+NV E+DV+TG GE++TCS++ N+ LF AVLGGLGQFG+ITRARI++EPAP R RW+R +Y+DF+ Sbjct: 35 PASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGD------AAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWNDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFA 260
BLAST of FC878939 vs. ExPASy Swiss-Prot
Match: CKX3_ARATH (Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 4.254e-61 Identity = 130/267 (48.69%), Postives = 167/267 (62.55%), Query Frame = 1 Query: 34 LAEKELLSMASKLLLTFAICRLI---VTVGLTMDPTELLRLGVY-GQLSVDPSDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMXXXXXXXXXXXTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFS 822 +A L S + +T I + +T + P +L + G+L+ S V++A+ DFG +++ P AVL P+S +DIT ++K +++S+ F ++ARGHGHS GQA +GVV+ M YVDV LWI+VL TLE GL P SWTDYLYL+VGGTLSN GISGQ F GPQITNV E+DV+TGKGE+ TCS++ NS LF AVLGGLGQFGIITRARI LE APKR +W+R LY DFS Sbjct: 1 MASYNLRSQVRLIAITIVIIITLSTPITTNTSPQPWNILSHNEFAGKLTSSSSSVESAATDFGHVTKIFPSAVLIPSSVEDITDLIKLSFDSQL-SFPLAARGHGHSHRGQASAKDGVVVNMRSMVNRDRGIKVSRTCL--------YVDVDAAWLWIEVLNKTLELGLTPVSWTDYLYLTVGGTLSNGGISGQTFRYGPQITNVLEMDVITGKGEIATCSKDMNSDLFFAVLGGLGQFGIITRARIKLEVAPKRAKWLRFLYIDFS 258
BLAST of FC878939 vs. ExPASy Swiss-Prot
Match: CKX2_ARATH (Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.728e-59 Identity = 124/259 (47.88%), Postives = 167/259 (64.48%), Query Frame = 1 Query: 58 MASKLLLTFAICRLIVTV---GLTMDPTELLRLGVYGQLSVDPSDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMXXXXXXXXXXXTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFST 825 MA+ L+ I L++T G+ +D + L L LS DPS + AS DFG ++ P V+ P+S DI+R+++ A ++ F ++ARG GHS+NGQA S GV++ M V + ++Y DV G LW+DVL+ T E G++P SWTDYL+++VGGTLSN GI GQ F GP ++NV ELDV+TGKGE+LTCS + N LF+ VLGGLGQFGIITRARI L+ APKR +W R+LYSDF+T Sbjct: 1 MANLRLMITLITVLMITKSSNGIKIDLPKSLNL----TLSTDPSIISAASHDFGNITTVTPGGVICPSSTADISRLLQYAANGKST-FQVAARGQGHSLNGQASVSGGVIVNMTCITDVV------------VSKDKKYADVAAGTLWVDVLKKTAEKGVSPVSWTDYLHITVGGTLSNGGIGGQVFRNGPLVSNVLELDVITGKGEMLTCSRQLNPELFYGVLGGLGQFGIITRARIVLDHAPKRAKWFRMLYSDFTT 242 HSP 2 Score: 21.9422 bits (45), Expect = 1.728e-59 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 816 FFNFTRDQEYLISL 857 F FT+DQE LIS+ Sbjct: 240 FTTFTKDQERLISM 253
BLAST of FC878939 vs. ExPASy Swiss-Prot
Match: CKX4_ARATH (Cytokinin dehydrogenase 4 OS=Arabidopsis thaliana GN=CKX4 PE=1 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 7.508e-58 Identity = 116/226 (51.33%), Postives = 150/226 (66.37%), Query Frame = 1 Query: 172 DPSDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAY---------ESEAHGFTISARGHGHSINGQAQTSNGVVIQMXXXXXXXXXXXTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFS 822 DP + AS DFG ++ P AVL P+S ++ R+++ A S A F ++ARG GHS+ GQA GVV+ M PAA+ + Y DV G +W+DVL++ ++ G++P +WTDYLYLSVGGTLSNAGI GQ F GPQI+NVHELDV+TGKGE++TCS + N LF+ VLGGLGQFGIITRARI+L+ AP RV+W R+LYSDFS Sbjct: 45 DPFSISAASHDFGNITDENPGAVLCPSSTTEVARLLRFANGGFSYNKGSTSPASTFKVAARGQGHSLRGQASAPGGVVVNMTCLAMAAK----PAAVV--ISADGTYADVAAGTMWVDVLKAAVDRGVSPVTWTDYLYLSVGGTLSNAGIGGQTFRHGPQISNVHELDVITGKGEMMTCSPKLNPELFYGVLGGLGQFGIITRARIALDHAPTRVKWSRILYSDFS 264
BLAST of FC878939 vs. ExPASy Swiss-Prot
Match: CKX6_ARATH (Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 9.806e-58 Identity = 119/218 (54.59%), Postives = 148/218 (67.89%), Query Frame = 1 Query: 130 TELLRLGVYGQLSVDPSDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHG-FTISARGHGHSINGQAQTSNGVVIQMXXXXXXXXXXXTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAP 780 + L L + G L + V AS DFG + P AVLHP S DI ++ + H T++ARG GHS+ GQAQT +G+VI M + + P YVDV GGELWI++L TL++GLAPKSWTDYL+L+VGGTLSNAGISGQAF GPQI+NVH+L++VTGKGE+L C++ QNS LF+ VLGGLGQFGIITRARI+LEPAP Sbjct: 28 SSLKALPLVGHLEFE--HVHHASKDFGNRYQLIPLAVLHPKSVSDIASTIRHIWMMGTHSQLTVAARGRGHSLQGQAQTRHGIVIHMESLHPQKLQVYSVDSPAP-------YVDVSGGELWINILHETLKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQISNVHQLEIVTGKGEILNCTKRQNSDLFNGVLGGLGQFGIITRARIALEPAP 236
BLAST of FC878939 vs. ExPASy Swiss-Prot
Match: CKX7_ARATH (Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.120e-56 Identity = 117/226 (51.77%), Postives = 150/226 (66.37%), Query Frame = 1 Query: 145 LGVYGQLSVDPSDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMXXXXXXXXXXXTPAALRPHVYEKERYVDVWGGELWIDVL-RSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDF 819 L + G++ + A DFG ++ +P AV+ P +DI VKAA S+ T++ARG+GHSINGQA G+V+ M + + +VDV GG LW DVL R E+GLAP+SWTDYL L+VGGTLSNAG+SGQAF GPQ +NV ELDVVTG G+++TCSE +NS LF +VLGGLGQFGIITRAR+ L+PAP VRWIRV+Y++F Sbjct: 34 LNIQGEILCGGAAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDK--LTVAARGNGHSINGQAMAEGGLVVDMSTTAENHFEVGYLSG-----GDATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEF 252
BLAST of FC878939 vs. ExPASy Swiss-Prot
Match: FAS5_RHOFA (Uncharacterized oxidoreductase ORF5 in fasciation locus OS=Rhodococcus fascians GN=fas5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.802e-26 Identity = 77/215 (35.81%), Postives = 101/215 (46.98%), Query Frame = 1 Query: 172 DPSDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMXXXXXXXXXXXTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSD 816 D + +A DFG A+P V+ P + D+ ++ + A +++ RG GHS GQ Q GVV+ M A + G W DV+ +TL P TDYL +VGGTLS G G + G Q NV L VVTG G+ CS NS LF AV GGLGQFG+I A I L A + VR ++ YS+ Sbjct: 8 DDVHLTSAGADFGNCIHAKPPVVVVPRTVADVQEALRY---TAARNLSLAVRGSGHSTYGQCQADGGVVLDMKRFNTVHDVRSGQATID-------------AGVRWSDVVAATLSRQQTPPVLTDYLGTTVGGTLSVGGFGGSSHGFGLQTDNVDSLAVVTGSGDFRECSAVSNSELFDAVRGGLGQFGVIVNATIRLTAAHESVRQYKLQYSN 206 The following BLAST results are available for this feature:
BLAST of FC878939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878939 ID=FC878939; Name=FC878939; organism=Citrus clementina; type=EST; length=857bpback to top |