FC878942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.789e-61 Identity = 132/237 (55.70%), Postives = 150/237 (63.29%), Query Frame = 1 Query: 271 GGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRKISPSPXXXXXXXXXXXXXXRS-------------ISPANSGEEQVISANSSPVA--------VPXXXXXXXXXXXXMPXXXXXXXXXXXXXAQLNNELSQLKGLCNNILALMTNYASGQLDNVS-LREGKSVEVL 915 GGDSQRS+PTPFLTKTYQLV+DP D+LI+WN DG+TFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEF+NDCF+RGEK LLRDIQRRKIS P S +SP+NSGEEQVIS+NSSP A V P +L E+++LKGL NI LM N+ GQ D L EGK +++L Sbjct: 49 GGDSQRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRKIS-QPAMAAAAAAAAAAVAASAVTVAAVPVVAHIVSPSNSGEEQVISSNSSPAAAAAAIGGVVGGGSLQRTTSCTTAPELVEENERLRKDNERLRKEMTKLKGLYANIYTLMANFTPGQEDCAHLLPEGKPLDLL 284
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.361e-60 Identity = 124/222 (55.86%), Postives = 145/222 (65.32%), Query Frame = 1 Query: 238 PVEQTSESPATG-GDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRKISP-------SPXXXXXXXXXXXXXXRSISPANSGEEQVISANSS---PVAVPXXXXXXXXXXXXMPXXXXXXXXXXXXXAQLNNELSQLKGLCNNILALMTNYASGQ 870 P +E+ G G QR++PTPFLTKTYQLVDDP+VDD+I+WN DGSTF+VWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRK+VPDRWEFANDCFRRGE+ LL +I RRK++P + R SP SGEEQVIS++SS P+ +P AQL ELSQ++ LCNNIL LM+ YAS Q Sbjct: 26 PPAPAAEAAGVGVGQQQRTVPTPFLTKTYQLVDDPAVDDVISWNDDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGERRLLCEIHRRKVTPPAPAATTAAVAAAIPMALPVTTTRDGSPVLSGEEQVISSSSSPEPPLVLPQAPSGSGSGGVASGDVGDENERLRRENAQLARELSQMRKLCNNILLLMSKYASTQ 247
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica GN=HSFB2C PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.987e-55 Identity = 126/250 (50.40%), Postives = 145/250 (58.00%), Query Frame = 1 Query: 220 GIDPMAPVEQTSESPATGGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRKI---------SPSP--------------XXXXXXXXXXXXXXRSISPANSGEEQVISAN----------SSPVAVPXXXXXXXXXXXXMPXXXXXXXXXXXXXAQLNNELSQLKGLCNNILALMTNYASGQ 870 G +P T+ + A G QRSLPTPFLTKTYQLV+DP+VDD+I+WN DGSTF+VWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRK+VPDRWEFANDCFRRGEK LL DI RRK+ PSP R+ SPA+S EEQV+S+N S + P M A+L EL +K LCNNIL LM+ YA+ Q Sbjct: 13 GGEPPPAAVMTAAAEALAG--QRSLPTPFLTKTYQLVEDPAVDDVISWNEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGEKRLLCDIHRRKVVAAAAAAPPPPSPGMATAAAAVASGAVTVAAAPIPMALPVTRAGSPAHSSEEQVLSSNSGSGEEHRQASGSGSAPGGGGGGSASGGDM---GEENERLRRENARLTRELGHMKKLCNNILLLMSKYAATQ 257
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.387e-52 Identity = 109/212 (51.42%), Postives = 137/212 (64.62%), Query Frame = 1 Query: 280 SQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRKISPSPXXXXXXXXXXXXXXRSISPANSGEE----QVISANSSPVAVPXXXXXXXXXXXXMPXXXXXXXXXXXXXAQLNNELSQLKGLCNNILALMTNYASGQLDNVSLREGKS 903 SQRS+PTPFLTKT+ LV+D S+DD+I+WN DGS+FIVW P +FA+DLLPK+FKHNNFSSFVRQLNTYGF+KVVPDRWEF+ND F+RGEK LLR+IQRRKI+ + +SP+NSGE+ QV+S SSP + QLN EL+Q+K +C+NI +LM+NY Q + S G S Sbjct: 16 SQRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRKITTTHQTVVAPSSEQRNQTMVVSPSNSGEDNNNNQVMS--SSPSSWYCHQTKTTGNGGLSVELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNYVGSQPTDRSYSPGGS 225
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43 Identity = 94/202 (46.53%), Postives = 120/202 (59.41%), Query Frame = 1 Query: 280 SQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRKISPSPXXXXXXXXXXXXXXRSISPANSGEEQVISANSSPVAVPXXXXXXXXXXXXMPXXXXXXXXXXXXXAQLNNELSQLKGLCNNILALMTNYASGQLDNVS 885 SQR+ P PFL KTYQLVDD + DD+I+WN G+TF+VW+ AEFA+DLLPKYFKHNNFSSFVRQLNTYGFRK+VPD+WEFAN+ F+RG+K LL I+RRK S S SP NSG++ S+ SSP + L++EL Q K CN ++A ++ Y D ++ Sbjct: 2 SQRTAPAPFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTS----TPAGGKSVAAGASASPDNSGDDIGSSSTSSPDSKNPGSVDTPGKLSQFTDLSDENEKLKKDNQMLSSELVQAKKQCNELVAFLSQYVKVAPDMIN 199
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HFB4C_ORYSJ (Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica GN=HSFB4C PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.591e-40 Identity = 79/120 (65.83%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 253 SESPATGGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDG-STFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRK------ISPSP 591 S+ A +Q+++P PFLTKTYQLVDDP+ D +++W D STF+VWRP EFARD+LP YFKHNNFSSFVRQLNTYGFRKVVP+RWEFAN+ FR+GEK LL +I RRK SPSP Sbjct: 8 SDCEAAAAAAQKAVPAPFLTKTYQLVDDPATDHIVSWGDDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLTEIHRRKTSSASTASPSP 127
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana GN=HSFB4 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.078e-40 Identity = 73/99 (73.74%), Postives = 86/99 (86.87%), Query Frame = 1 Query: 286 RSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRKIS 582 +++P PFLTKTYQLVDDP+ D +++W D +TF+VWRP EFARDLLP YFKHNNFSSFVRQLNTYGFRK+VPDRWEFAN+ F+RGEK LL +I RRK S Sbjct: 29 KAVPAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRKTS 127
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HSFB1_ARATH (Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.714e-40 Identity = 72/99 (72.73%), Postives = 88/99 (88.89%), Query Frame = 1 Query: 280 SQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRK 576 +QRS+P PFL+KTYQLVDD S DD+++WN +G+ F+VW+ AEFA+DLLP+YFKHNNFSSF+RQLNTYGFRK VPD+WEFAND FRRG + LL DI+RRK Sbjct: 7 AQRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRK 105
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HFB2A_ORYSJ (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 1.347e-39 Identity = 77/106 (72.64%), Postives = 86/106 (81.13%), Query Frame = 1 Query: 259 SPATGGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRK 576 SPA G PFLTKTY +V+DPS D+ I+WN G+ F+VWRPAEFARDLLPK+FKH+NFSSFVRQLNTYGF+KVV DRWEFANDCFRRGEK LL IQRRK Sbjct: 3 SPAAG-------TPPFLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVADRWEFANDCFRRGEKHLLGGIQRRK 101
BLAST of FC878942 vs. ExPASy Swiss-Prot
Match: HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica GN=HSFB4D PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.759e-39 Identity = 75/121 (61.98%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 220 GIDPMAPVEQTSESPATGGDSQRSLPTPFLTKTYQLVDDPSVDDLIAWNSDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRKIS 582 G + + +E++ T + + P PFL+KTYQLVDDPS DD+++W D +TF+VWRP EFARDLLP YFKHNNFSSFVRQLNTYGFRK+V DRWEFAN+ FR+G K LL +I RRK S Sbjct: 9 GGEMVVSMERSHGRSTTTAAAVTAAPAPFLSKTYQLVDDPSTDDVVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLSEIHRRKSS 129 The following BLAST results are available for this feature:
BLAST of FC878942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878942 ID=FC878942; Name=FC878942; organism=Citrus clementina; type=EST; length=916bpback to top |