FC878948

Overview
NameFC878948
Unique NameFC878948
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length823
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5192 contig Ccv1_Contig5192:340..1162. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: GL8D1_XENTR (Glycosyltransferase 8 domain-containing protein 1 OS=Xenopus tropicalis GN=glt8d1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.655e-14
Identity = 57/201 (28.36%), Postives = 90/201 (44.78%), Query Frame = 2
Query:  248 LRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR-GRVLGAPEYCH-----------ANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIY 811
            L G VA + S+  +     N+VF+ I+T   +  +   +  T    + +++  FDT ++ GK+         +P+ +AR YL +LLP T  + IY D D+IV DD+  L++  LR G      + C            AN  NY     +              C FN GV V +L +WR +  T +LE WM +     +Y
Sbjct:   78 LGGLVAAINSISSNTK--SNVVFYIITTNDTKGHIRSWLDGTGLKRVTYKLLAFDTRVLDGKVRVDAGAEPVKPMTFARFYLPNLLPETK-KAIYLDDDVIVQDDIRDLYNTPLRPGHAAAFSDDCDSVTSKFPVRGAANQYNYIGFLDYKKERIRSLGMRANTCSFNPGVFVANLTEWRRQNVTRQLEKWMELDVAEELY 275          
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: GL8D1_XENLA (Glycosyltransferase 8 domain-containing protein 1 OS=Xenopus laevis GN=glt8d1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.814e-14
Identity = 56/210 (26.67%), Postives = 96/210 (45.71%), Query Frame = 2
Query:  248 LRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINL---------------------RGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIY 811
            L G +A + S+  +     N+VF+ I+T   +  +S  +  T    + +++  FD  ++ GK+         +P+ +AR YL  LLP    ++IY D D+IV DD+ +L++  +                     RG   GA +Y +  F +Y   +  S  + + T      C FN GV V +L +WR +  T +LE WM +     +Y
Sbjct:   76 LGGLIATINSISSNTK--SNVVFYIITTNDTKKHISSWLDGTDLKRVAYKLLTFDARVLDGKVRVDAGAEPVKPMTFARFYLPSLLP-GAKKVIYLDDDVIVQDDIVQLYNTPISPGHAAAFSEDCDSVTSKFPVRG---GANQYNYIGFLDYKKERIRSLGIKANT------CSFNPGVFVANLTEWRRQNITRQLEKWMELDVTEELY 273          
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: GLTR_ARATH (Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.829e-13
Identity = 38/119 (31.93%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  467 LNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIYELGS 823
            LN+ R YL ++ P  + +I++ D D++V  DV  LW INL G+V GA E C  +F  Y     +S+P+          C +  G+ + DL  WR  + T++  YW  + +   +++LG+
Sbjct:  365 LNHLRFYLPEMYP-KLNKILFLDDDVVVQKDVTGLWKINLDGKVNGAVETCFGSFHRYGQYLNFSHPLIKENF-NPSACAWAFGMNIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGT 481          
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: GL8D1_RAT (Glycosyltransferase 8 domain-containing protein 1 OS=Rattus norvegicus GN=Glt8d1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.389e-13
Identity = 53/202 (26.24%), Postives = 96/202 (47.52%), Query Frame = 2
Query:  248 LRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITA-TFPYLNFEIYRFDTNLVKGKISYSIRQALD-QPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR-GRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRP-----------CYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIY 811
            L G++A + S+  H     N++F+ ++  R    L   + + +   + ++I  FDT L++GK+     Q    +PL +AR YL  L+P +  + IY D D+IV  D+  L++  L+ G      E C +  T        +   + G +  ++            C FN GV V +L +W+ +  T +LE WM++  +  +Y
Sbjct:   77 LGGTIAAINSI--HQNTRSNVIFYIVTFNRTADHLRSWLNSGSLKSIRYKIVNFDTKLLEGKVKEDPDQGESMKPLTFARFYLPILVP-SAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVMIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNVTNQLEKWMKLNVEEGLY 275          
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: GL8D1_BOVIN (Glycosyltransferase 8 domain-containing protein 1 OS=Bos taurus GN=GLT8D1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13
Identity = 61/230 (26.52%), Postives = 102/230 (44.35%), Query Frame = 2
Query:  164 PKATWSALDRRSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDTNLVKGKISYSIRQALD-QPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR-GRVLGAPEYCHA-----------NFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIY 811
            P A    +D R      I + +      L G++A + S+ QH T   N++F+ ++       L   ++++    + ++I  FDT L++GK+     Q    +PL +AR YL  L+P    + IY D D+IV  D+  L++  L+ G      E C +           N  NY     +              C FN GV V +L +WR +  T +LE WM++  +  +Y
Sbjct:   52 PNAPQRVVDGREEE---IPVVIAASEDRLGGAIAAINSI-QHNT-RSNVIFYIVTLNGTADHLRSWLSSSNLKRIRYKIVNFDTKLLEGKVKEDPDQGESIKPLTFARFYLPILVP-RAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSTSAKVVIRGAGNQYNYIGYLDYKKERIRELSMKASTCSFNPGVFVANLTEWRRQNITNQLEKWMKLNVEEGLY 275          
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: QUA1_ARATH (Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 37/119 (31.09%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  467 LNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIYELGS 823
            LN+ R YL ++ P  + RI++ D D++V  D+  LW I++ G+V GA E C  +F  Y     +S+P+        + C +  G+   DL  WR  + TE+  YW  + +   +++LG+
Sbjct:  363 LNHLRFYLPEMYP-KLHRILFLDDDVVVQKDLTGLWEIDMDGKVNGAVETCFGSFHRYAQYMNFSHPLIKEKF-NPKACAWAYGMNFFDLDAWRREKCTEEYHYWQNLNENRALWKLGT 479          
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: GL8D1_MOUSE (Glycosyltransferase 8 domain-containing protein 1 OS=Mus musculus GN=Glt8d1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 53/202 (26.24%), Postives = 95/202 (47.03%), Query Frame = 2
Query:  248 LRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITA-TFPYLNFEIYRFDTNLVKGKISYSIRQALD-QPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR-GRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRP-----------CYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIY 811
            L G++A + SV  H     N++F+ ++       L   + + +   + ++I  FDT L++GK+     Q    +PL +AR YL  L+P +  + IY D D+IV  D+  L++  L+ G      E C +  T        +   + G +  ++            C FN GV V +L +W+ +  T +LE WM++  +  +Y
Sbjct:   77 LGGTIAAINSV--HQNTRSNVMFYIVTFNSTADHLRSWLNSGSLKSIRYKIVNFDTKLLEGKVKQDPDQGESMKPLTFARFYLPILVP-SAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVIIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNVTNQLEKWMKLNVEEGLY 275          
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: GL8D1_HUMAN (Glycosyltransferase 8 domain-containing protein 1 OS=Homo sapiens GN=GLT8D1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 59/230 (25.65%), Postives = 105/230 (45.65%), Query Frame = 2
Query:  164 PKATWSALDRRSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITA-TFPYLNFEIYRFDTNLVKGKISYSIRQALD-QPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR-GRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRP-----------CYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIY 811
            P A   A+D R      I + +      L G++A + S+ QH T   N++F+ ++       L   + + +   + ++I  FD  L++GK+     Q    +PL +AR YL  L+P +  + IY D D+IV  D+  L++  L+ G      E C +  T        +   + G +  ++            C FN GV V +L +W+ +  T +LE WM++  +  +Y
Sbjct:   52 PNALRHAVDGRQEE---IPVVIAASEDRLGGAIAAINSI-QHNT-RSNVIFYIVTLNNTADHLRSWLNSDSLKSIRYKIVNFDPKLLEGKVKEDPDQGESMKPLTFARFYLPILVP-SAKKAIYMDDDVIVQGDILALYNTALKPGHAAAFSEDCDSASTKVVIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNITNQLEKWMKLNVEEGLY 275          
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: GL8D1_DANRE (Glycosyltransferase 8 domain-containing protein 1 OS=Danio rerio GN=glt8d1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.450e-12
Identity = 55/212 (25.94%), Postives = 98/212 (46.23%), Query Frame = 2
Query:  215 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQALD-QPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR-GRVLGAPEYCHA-----------NFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIY 811
            I + +T     L  +V  + S+ +++    N+VF+ ++     + LS  ++ T   L  +I  FD +++ GKI    ++    +PL +AR Y+   LP    + IY D D+IV  D+ +L++ +L+ G V    E C +           N  +Y     +              C FN GV V +L +W+++  T +LE+WM    K  +Y
Sbjct:   65 IPVLITAPEERLGAAVTAMNSIYRNSKA--NVVFNIVTLNESVVHLSTWLSKTD--LKHKIIVFDPSILLGKIPTDAQKMETVRPLTFARFYMPAFLP-DAEKAIYLDDDVIVQGDIRELFNTSLKSGHVAAFSEDCDSASSKGIVRGAGNQNSYIGYLDFKKEAIKKLGMRANTCSFNPGVFVANLTEWKQQNVTSQLEFWMERNAKEDLY 271          
BLAST of FC878948 vs. ExPASy Swiss-Prot
Match: GL8D2_HUMAN (Glycosyltransferase 8 domain-containing protein 2 OS=Homo sapiens GN=GLT8D2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.814e-11
Identity = 51/183 (27.87%), Postives = 85/183 (46.45%), Query Frame = 2
Query:  305 NIVFHFISTQRQRLELSRTIT-ATFPYLNFEIYRFDTNLVKGKISY-SIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR-GRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRP-----------CYFNTGVMVIDLRKWRERRYTEKLEYWMRVQKKYRIY 811
            NI+F+ +  +     + + I  +    +NF+I  F+  ++KGKI   S R  L QPLN+ R YL  LL     ++IY D D+IV  D+ +L+   L  G      + C                 + G +  R+            C FN GV+V ++ +W+ +R T++LE WM+   +  +Y
Sbjct:   79 NILFYVVGLRNTLTRIRKWIEHSKLREINFKIVEFNPMVLKGKIRPDSSRPELLQPLNFVRFYLP-LLIHQHEKVIYLDDDVIVQGDIQELYDTTLALGHAAAFSDDCDLPSAQDINRLVGLQNTYMGYLDYRKKAIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVEENLY 260          
The following BLAST results are available for this feature:
BLAST of FC878948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
GL8D1_XENTR1.655e-1428.36Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D1_XENLA4.814e-1426.67Glycosyltransferase 8 domain-containing protein 1 ... [more]
GLTR_ARATH1.829e-1331.93Uncharacterized glycosyltransferase At3g02350 OS=A... [more]
GL8D1_RAT2.389e-1326.24Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D1_BOVIN5.322e-1326.52Glycosyltransferase 8 domain-containing protein 1 ... [more]
QUA1_ARATH1.186e-1231.09Glycosyltransferase QUASIMODO1 OS=Arabidopsis thal... [more]
GL8D1_MOUSE1.186e-1226.24Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D1_HUMAN1.186e-1225.65Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D1_DANRE3.450e-1225.94Glycosyltransferase 8 domain-containing protein 1 ... [more]
GL8D2_HUMAN3.814e-1127.87Glycosyltransferase 8 domain-containing protein 2 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA87BA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA87BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878948 ID=FC878948; Name=FC878948; organism=Citrus clementina; type=EST; length=823bp
AAAAAAAAAAAAAAAAACTCTCACTCTTGCTTGCTCGCACTTCACTATGA
GACTAAAATTTGAGTCTCGTTTGTTGATATTTTTTACTATAATTTTCCCC
GCAATCTCAGGCGAGCTTCCTCGGTTTAGAGAAGCACCGGCATTTCGAAA
CGGCAGAGAATGTCCGAAAGCGACATGGTCTGCGCTGGACAGAAGATCTC
ACAATCCATCAATCATCCACATATCCATGACTCTCGACTCGACGTACCTC
CGCGGCTCAGTCGCCGGCGTCTTCTCCGTCCTTCAACACGCCACGTGTCC
CGAAAACATCGTCTTCCACTTCATCAGCACGCAGCGGCAGCGACTCGAGC
TGAGCCGCACGATCACCGCCACATTCCCTTACCTAAACTTCGAAATCTAT
CGCTTCGACACCAATCTAGTGAAAGGCAAGATCTCGTACTCGATTCGTCA
AGCGTTGGATCAGCCGTTGAATTACGCTAGAATCTACCTGGCCGATCTTT
TGCCGTTGACCGTTGGCCGCATTATTTACTTTGACTCGGACCTCATAGTG
GTCGATGACGTGGCAAAATTGTGGAGCATCAATTTGAGAGGACGCGTGCT
TGGTGCGCCGGAGTACTGTCACGCTAACTTTACCAACTATTTCACGTCAA
AGTTCTGGTCGAACCCTGTGTTTTCCGGGACCGTTAAAGGGAGGAGGCCG
TGTTATTTTAACACGGGAGTGATGGTGATTGATTTGAGGAAATGGAGAGA
AAGAAGGTACACAGAGAAATTGGAGTACTGGATGAGAGTGCAAAAGAAGT
ACAGAATTTACGAGCTGGGTTCG
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