FC878951
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FDL34_ARATH (Putative F-box/FBD/LRR-repeat protein At5g44950 OS=Arabidopsis thaliana GN=At5g44950 PE=4 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.214e-16 Identity = 75/256 (29.30%), Postives = 120/256 (46.88%), Query Frame = 3 Query: 135 VEDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLLSNSVSISKFSLHCQKKPRYL-SRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVE--IYKPNMPD--FSICPVLEDLSI----DYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYS 875 +E+++RTS+LSSRW+ +W +P L N D +D FE+ +D+ L N + F L+ + YL R W+A + R + ++V P+ + P I S+TL LKL + +P + P +K H+E Y P + + S CPVLEDL+I + LNF + + SQTLK L + +N+ I+AP L+++ D +V L SL LD +++ Sbjct: 23 IEESIRTSVLSSRWRKLWLKVPGLDVN-----VHDFPADGNL---FESLMDKFLEVNRGRLQNFKLNYESNLYYLMDRFVPWIATVVDRGIQHLDVTATDCPPWTIDFMPAN----ICKSKTLVSLKL-VNVGLDTPKFVVSLPCLKIMHLEDIFYSPLIAENLISGCPVLEDLTIVRNHEDFLNF-----LRVMSQTLKNFRLTFDWG-MGSNDFSVEIDAPGLKYMSFRDSQSDRIVVKNLSSLVKIDLDTEFN 259
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBL64_ARATH (F-box/LRR-repeat protein At3g59200 OS=Arabidopsis thaliana GN=At3g59200 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.612e-16 Identity = 71/254 (27.95%), Postives = 118/254 (46.46%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKL--ETDFVFKSPSSGICFPRVKKFHVEIYKPNMPDF------SICPVLEDLSIDYSLNFDWD--ADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDI 866 ++A TS+LS +W+ ++A + NL F+D SD F FVDR+L L + S++KFSL C L+R+ W+ + R V E+++++ ++ P LP I+ S+TL LKL D + P++K +++ F S CPVLE+L + +N W+ S+S +TLKRL + N + + P L +L +D Y +SL +A + + Sbjct: 27 KEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVELSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSELDLSI-LEYP---------LPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDVQERGFGFVKLLSGCPVLEELVL---MNIGWENWKFCSVSVKTLKRLTFFC--EETYENPKSVSFDTPNLVYLEYSDAIASKYPKVNFNSLVEAHIGL 265
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FDL33_ARATH (Putative F-box/FBD/LRR-repeat protein At5g25850 OS=Arabidopsis thaliana GN=At5g25850 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.027e-15 Identity = 80/251 (31.87%), Postives = 120/251 (47.81%), Query Frame = 3 Query: 135 VEDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLLSNSVS-ISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVE-IYKPNMPDF----SICPVLEDLSIDYSLNFDWDADI-SISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDI 866 +++ V TS+LS+RWK +W S+P+L +L Y S F +F DR S VS I L+ + L W+ + RN+ + V + F E LP +Y ETL LKL P + P +K H+ ++ PN F S CPVLEDL ID N D + + S++LKRL L+ +VF + I+AP + +L +ND +Y++ +L S +A+LDI Sbjct: 39 IKEVVTTSVLSTRWKNIWLSVPSL----ELIY-----SIFPNFNTFRSFGDRFFDSTRVSCIHNLKLYFDEHDACY--LTSWINAFVTRNIRRLYVRRVRGNYFHE------LPLSLYVCETLVSLKL-FHLTLVDPEF-VSLPCLKIMHLNYVWFPNDATFERLVSSCPVLEDLKIDVLWN---DGRVYRVKSRSLKRLRLLRSSTMVFDSVPGVVIDAPLICYLRINDRVSETYILNDLES--NAKLDI 265
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FDL3_ARATH (F-box/FBD/LRR-repeat protein At1g16930 OS=Arabidopsis thaliana GN=At1g16930 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.753e-15 Identity = 72/262 (27.48%), Postives = 124/262 (47.33%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLLS-NSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYKPNMPD-----FSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYSRVRSDPVRAD 905 +++V TS+LS RW+ +W +P L + + D+ F +FV+R L S N + +F L + SR K W+ I R V V+ VDD E V++P +Y+ E L L+L V + P VK H+++ K + S CPVLE+L+I N + + + SQ+LK + I + H TI+AP+LE++++ D S++++ + +D+ ++ +DP+ D Sbjct: 35 KESVCTSVLSKRWRNLWLHVPVLDLDS------NNFPDDDV---FVSFVNRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVHNEVDDDDEL----VKMPLSLYSCERLVNLQLYR--VALDHPESVSLPCVKIMHLDMVKYDADSTLEILISGCPVLEELTIVRDPNDSLEV-VCVRSQSLK--SFKIDSERYESQNHVVTIDAPRLEYMNLCDHRSDSFIIHNIGPFAKVDIDVIFNVEYNDPLEPD 278
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FDL31_ARATH (F-box/FBD/LRR-repeat protein At5g22660 OS=Arabidopsis thaliana GN=At5g22660 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.753e-15 Identity = 77/260 (29.62%), Postives = 124/260 (47.69%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLLSNSVS-ISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLET----DFVFKSPSSGICFPRVKKFHVE----IYKPNMPDF-SICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEH----QATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYS 875 E+AV TSILS+RWK +W S P L + D D T F +F R L S S + K + Q + + + W+ A+ R + +EV+ +D + LP +Y SE+L L+L FVF + P +K H+E Y M F S CPVLEDL++ +++ + + +SSQ+L L L+I + N+ + I+AP+L +L + D VS+++ L S A + + ++ Sbjct: 33 ENAVTTSILSTRWKDLWLSTPVLDID------IDAFDD---ATTFISFATRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQHLEVDSRIDHMID------TLPLTVYLSESLVSLRLHLVMLHRFVF------VSLPNLKVMHLEENIYSYAETMEKFISSCPVLEDLTVVRNVDEATEKVLRVSSQSLNSLKLVIDSSKCWYNDDSDDWKVVIDAPQLVYLSLKDDQSVSFVINNLCSSAKADIKVSFN 271
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBD10_ARATH (Putative FBD-associated F-box protein At3g50710 OS=Arabidopsis thaliana GN=At3g50710 PE=4 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.289e-15 Identity = 63/236 (26.69%), Postives = 113/236 (47.88%), Query Frame = 3 Query: 126 SRKVEDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLLSNSVSI---SKFSLH--CQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHV-----EIYKPNMPDFSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVND 803 S +D V T +LS RWK +W +P L F+D+ + RF +VD+ ++ N + KF++ C + + W+ + ++RN+ E+E++ + F E + ++LP +Y E LE+LKL + V P +CFP +K H+ + K + S CPVLE+L +D S N + TL+ L+++ ++ + + AP L++ + D Sbjct: 18 SLPTKDVVVTMLLSKRWKFLWMMVPKLRFDDEF------ELEPSYYGRFLKYVDKSMVLNRAQVLETVKFNVGPCCSSED-----IATWIRIGMVRNMRELEIS-HCEGYFRE-HRSIKLPKSLYTYEKLEVLKLASTVVLNVPID-VCFPSLKSLHLVCVEYKTKKSHRRLLSGCPVLEELVLDKSYNSFHVRSFYVEIPTLQSLSILDTSGELY-GDFTFVVNAPALKYFNFVD 238
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FDL27_ARATH (F-box/FBD/LRR-repeat protein At4g26340 OS=Arabidopsis thaliana GN=At4g26340 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.099e-15 Identity = 65/250 (26.00%), Postives = 117/250 (46.80%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLLSNSVSISKFSLHCQKKPRYLS-RLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIY----KPNMPDFSI-CPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYE-LHSLCDARLDI 866 +D V TS+LS RW+ +W + L ++D G F FV R LLSN+ + K LH P + + W+ A+ R + ++++N+ LP +Y S+TLE L+L +FV S +C P +K H++ ++P CP LE+L ++ + D + D++ +L+RL+++ + + I+ P L++L++ D + E + L +A +DI Sbjct: 22 KDVVATSLLSKRWQSLWMLVSELEYDDSY--------HTGDYKSFSQFVYRSLLSNNAPVIKH-LHLNLGPDCPAIDIGLWIGFALTRRLRQLKINIRTSS----NDASFSLPSSLYTSDTLETLRL-INFVLLDVPSSVCLPSLKVLHLKTVDYEDDASLPSLLFGCPNLEELFVERH-DQDLEMDVTFVVPSLRRLSMIDKN---YGQCDRYVIDVPSLKYLNITDDAVYDVRQIENMPELVEAHVDI 253
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FDL38_ARATH (F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana GN=At5g56420 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.484e-14 Identity = 66/258 (25.58%), Postives = 116/258 (44.96%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRMLL--------SNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYK----PNMPD-FSICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDY 872 +D + TS+LS RW+ +W +P L ++ +L + RF FVDR LL S ++ I +K + WV + + R V E+ V+ + G EP+ LP C++ TL +LKLE + + S +CF +K H+ K ++P S C LEDL + D +++++ +LK L+L ++ I+ PKL+ + + D + + + +A +D+ Y Sbjct: 26 KDVLVTSLLSKRWRFLWTLVPRLNYDLRL--------HDNTCPRFSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKD------VGVWVRIGVDRFVRELSVS------YCSGEEPIRLPKCLFTCSTLAVLKLE-NITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSSLEDLVVQRCPG-DNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDTPKLKRVDIEDYWGGFCYIENMPEVVEANVDVIY 261
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBL82_ARATH (F-box/LRR-repeat protein At5g22700 OS=Arabidopsis thaliana GN=At5g22700 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.484e-14 Identity = 75/256 (29.30%), Postives = 123/256 (48.05%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRDGTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVE--IY--KPNMPDF-SICPVLEDLSIDYSLNFDWDADISISSQTLKRLNLMI----GGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYS 875 ++AV TSILS+RW+ +W S P L + D D T F +F R L S + KF L ++ + + W+ A+ R + +E VD F +E V L +Y SETL L+L FV + P +K H+E IY + +F S CPVLEDL++ ++ + + + S++L L L++ G I +E + I+AP+L +L + D S+++ L S A + + ++ Sbjct: 26 KNAVTTSILSTRWRSIWLSTPVLDID------IDAFDD---ATTFVSFASRFLEFSKDSCLHKFKLSVERDDVDMCTIMPWIQDAVNRRIQHLE----VDCRFSFHFEAVYL--TLYLSETLVSLRLH--FVTLHRYEFVSLPNLKVMHLEENIYYCLETLENFISSCPVLEDLTVVRIVDIITEKILRVRSRSLNSLKLVLDSSNGWFIDDIDEWKVIIDAPRLAYLSLKDDQSASFVISNLGSSAKADIKVSFN 264
BLAST of FC878951 vs. ExPASy Swiss-Prot
Match: FBL57_ARATH (F-box/LRR-repeat protein At3g58900 OS=Arabidopsis thaliana GN=At3g58900 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.938e-14 Identity = 68/263 (25.86%), Postives = 123/263 (46.77%), Query Frame = 3 Query: 138 EDAVRTSILSSRWKLVWASLPNLMFNDKLCYRRD--GTSDNGALTRFENFVDRML-LSNSVSISKFSLHCQKKPRYLSRLKFWVALAIMRNVHEIEVNLPVDDPFEEGYEPVELPDCIYNSETLEILKLETDFVFKSPSSGICFPRVKKFHVEIYKPNMPDFSI----CPVLEDLSIDYSLNFDW-DADISISSQTLKRLNLMIGGPIVFANEHQATIEAPKLEHLHVNDGTLVSYLVYELHSLCDARLDIDYSRVRSDPVRA 902 ++A TS+LS RW+ ++A +P L F+D + + G L F +FVDR+L L I FSL C K + W+ + R V ++++ + D + LP + S TL +L++ ++ +C P +K ++ + F I CP LE+L + N W D+++++SS LK L + + G N + +AP L + + D Y L +L +A++++ ++ + + VRA Sbjct: 22 KEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREKEGILQSFMDFVDRVLDLHGDSLIKTFSLKC-KTGVDSDHVDRWICNVLARGVSDLDLFIDFRDLY-------SLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVLDSCWLCIGQFQILLLACPALEELDM---TNTRWKDSNVTVSSSILKELTIDLHGCCSVVNLKSLSFDAPSLVYFYYCDSLAEDYPQVNLKNLVEAQINLLLTQAQIEQVRA 273 The following BLAST results are available for this feature:
BLAST of FC878951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878951 ID=FC878951; Name=FC878951; organism=Citrus clementina; type=EST; length=912bpback to top |