FC878985

Overview
NameFC878985
Unique NameFC878985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length804
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13435 contig Ccv1_Contig13435:27..830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN11_ARATH (Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 2.541e-105
Identity = 175/215 (81.40%), Postives = 192/215 (89.30%), Query Frame = 2
Query:  158 FNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            F+YG+ALSKSLLYFE+QRSGRLP+NQRVTWR HSGLTDGLEQGVDLVGGY+DAGD+VKFGLPMAFT+TMLSW VI+YG  ++  GE  HA+EAIKWGTDYFIKAHT P+VLW EVGDGDTDHYCWQRPEDMTTSRRA+K+DE NPGSD+AGET       SIVFR  NPHYSHLLLHHAQQLFEFGDKYRGKYD S++VVK YY SVSGYMDELL
Sbjct:   38 FDYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSYYASVSGYMDELL 252          
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN7_ORYSJ (Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.443e-100
Identity = 172/214 (80.37%), Postives = 183/214 (85.51%), Query Frame = 2
Query:  161 NYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            NY DAL KSLLYFE+QRSGRLPHNQRV WR HSGLTDGLEQGVDLVGGYYDAGD+VKFGLPMAFT+TMLSW +I+YG ++  AGE  HA+EAIKWGTDYFIKAHT P+ LW EVGDGDTDHYCWQRPEDMTTSR+AYKVD   PGSDVAGET       SIVFRK NPHY+ LLLHHAQQLFEF DKYRGKYDSSI  VK YY SVSGY DELL
Sbjct:   36 NYEDALRKSLLYFEAQRSGRLPHNQRVAWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSMIEYGDDVEAAGELGHALEAIKWGTDYFIKAHTKPNELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRERPGSDVAGETAAAMAAASIVFRKSNPHYASLLLHHAQQLFEFADKYRGKYDSSIAEVKSYYASVSGYKDELL 249          
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN5_ORYSJ (Endoglucanase 5 OS=Oryza sativa subsp. japonica GN=Os02g0151300 PE=2 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 5.484e-100
Identity = 172/230 (74.78%), Postives = 193/230 (83.91%), Query Frame = 2
Query:  116 MALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKL-NPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            ++L +      HD   YG+ALSKSLLYFE+QRSGRLP+NQRV WR HSGLTDGLEQGVDLVGGYYDAGD+VKFGLPMAFT+TMLSW V++YG EI+ AGE  HA+ AIKWGTDYFIKAHTHP+VLW +VGDGD+DHYCWQRPEDMTTSR AYKVD  NPGS+VA ET       SIVFR+  + HY+HLLLHHAQQLFEFGDKYRG+YD S+EVVK YYPS SGY DELL
Sbjct:   17 VSLAMAAAAAAHD---YGEALSKSLLYFEAQRSGRLPYNQRVRWRGHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSVLEYGEEIAAAGELGHALHAIKWGTDYFIKAHTHPNVLWTQVGDGDSDHYCWQRPEDMTTSRHAYKVDAENPGSEVAAETAAAMAAASIVFRRAGDAHYAHLLLHHAQQLFEFGDKYRGRYDESVEVVKNYYPSSSGYKDELL 243          
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN16_ORYSJ (Endoglucanase 16 OS=Oryza sativa subsp. japonica GN=Os06g0247900 PE=2 SV=2)

HSP 1 Score: 363.999 bits (933), Expect = 5.484e-100
Identity = 169/214 (78.97%), Postives = 184/214 (85.98%), Query Frame = 2
Query:  161 NYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            +Y +AL KSLLYFE+QRSGRLPH QRV WR HSGLTDGLEQGVDLVGGYYDAGD+VKFGLPMAFT+TMLSW +++YG +++ AGE  HA++AIKWGTDYFIKAHT PH LW EVGDGDTDHYCWQRPEDMTTSR+AYKVD R PGSDVAGET       SIVFR+ NPHYSHLLLHHAQQLFEF D YRGKYDSSI  VK YY SVSGY DELL
Sbjct:   30 DYEEALRKSLLYFEAQRSGRLPHGQRVAWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSLLEYGADVAAAGELAHALDAIKWGTDYFIKAHTKPHELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRRRPGSDVAGETAAAMAAASIVFRQSNPHYSHLLLHHAQQLFEFADTYRGKYDSSIAEVKSYYASVSGYHDELL 243          
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN22_ORYSJ (Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2)

HSP 1 Score: 361.688 bits (927), Expect = 2.722e-99
Identity = 166/214 (77.57%), Postives = 186/214 (86.92%), Query Frame = 2
Query:  161 NYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            +Y +AL KSLLYFE+QRSGRLP++QRVTWR HSGLTDGL+QGVDLVGGYYDAGD+VKFGLPMAFT+TMLSWG I +  +I+ AGE+ HA+EAIKWGTDYF+KAHTHP V W EVGDGDTDHYCWQRPEDMTTSR+AY+VD  NPGSD+AGET       SIVFR+ +PHYSHLLLHHAQQLFEFGD YRG YDSSIE V+ YY SVSGY DELL
Sbjct:   55 DYREALEKSLLYFEAQRSGRLPYSQRVTWRGHSGLTDGLQQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGAIDFAADIAAAGEWRHALEAIKWGTDYFVKAHTHPFVYWAEVGDGDTDHYCWQRPEDMTTSRQAYRVDRDNPGSDLAGETAAALAAASIVFRRSDPHYSHLLLHHAQQLFEFGDTYRGSYDSSIEEVRSYYASVSGYHDELL 268          
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN21_ORYSJ (Endoglucanase 21 OS=Oryza sativa subsp. japonica GN=GLU9 PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 8.775e-90
Identity = 156/215 (72.56%), Postives = 172/215 (80.00%), Query Frame = 2
Query:  158 FNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            F+Y  AL   LLYFE+QRSG LP+NQRV WR HSGL DGL+QGVDLVGGYYDAGDNVKFGLPMAFT+TMLSW   ++  EI+ AGE  H +EAIKWGTDY +KAHT    LW EVGDGDTDHYCWQRPEDMTTSR+AYKVD  NPGSDVAGET       SIVFR+  P YS LLL HA+QLF+FGD+YRGKYDSSI  V+ YY SVSGY DELL
Sbjct:   35 FDYKKALHSGLLYFEAQRSGHLPYNQRVRWRGHSGLADGLQQGVDLVGGYYDAGDNVKFGLPMAFTMTMLSWAAAEFWDEIAAAGERRHVLEAIKWGTDYLVKAHTAADELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRDNPGSDVAGETAAALAAASIVFRRSKPRYSRLLLRHAEQLFDFGDRYRGKYDSSIGEVRAYYASVSGYGDELL 249          
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN6_ARATH (Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2)

HSP 1 Score: 327.02 bits (837), Expect = 7.429e-89
Identity = 156/230 (67.83%), Postives = 182/230 (79.13%), Query Frame = 2
Query:  113 MMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            ++ L  P+    HD   YG ALSKSLL+FE+QRSG LP NQRVTWR HSGLTDG   GV+LVGGYYDAGDNVKFGLPMAFT+TM++W VI+YG ++   GE  ++I+AIKWGTDYFIKAH  P+VL+ EVGDG+TDHYCWQRPE+MTT R+AY++D  NPGSD+AGET       SIVFR+ NP YS LLL HA QLF+F DKYRGKYDSSI V + YY SVSGY DELL
Sbjct:   12 LLLLCFPVAFSGHD---YGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLTDGKSSGVNLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGNQLQANGELGNSIDAIKWGTDYFIKAHPEPNVLYGEVGDGNTDHYCWQRPEEMTTDRKAYRIDPSNPGSDLAGETAAAMAAASIVFRRSNPVYSRLLLTHAYQLFDFADKYRGKYDSSITVAQKYYRSVSGYNDELL 238          
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN19_ARATH (Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.830e-87
Identity = 152/230 (66.09%), Postives = 177/230 (76.96%), Query Frame = 2
Query:  113 MMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            ++ L L L+       +Y  ALSKS+L+FE+QRSG LP NQRV+WR HSGL DG   GVDLVGGYYDAGDNVKFGLPMAFT+T + W +I+YGG++   GE  HAI+A+KWGTDYFIKAH  P+VL+ EVGDG +DHYCWQRPE+MTT RRAYK+D  NPGSD+AGET       SIVFR+ +P YS  LL HA QLFEF DKYRGKYDSSI V + YY SVSGY DELL
Sbjct:   10 LVVLLLGLVQLAISGHDYKQALSKSILFFEAQRSGHLPPNQRVSWRSHSGLYDGKSSGVDLVGGYYDAGDNVKFGLPMAFTVTTMCWSIIEYGGQLESNGELGHAIDAVKWGTDYFIKAHPEPNVLYGEVGDGKSDHYCWQRPEEMTTDRRAYKIDRNNPGSDLAGETAAAMAAASIVFRRSDPSYSAELLRHAHQLFEFADKYRGKYDSSITVAQKYYRSVSGYNDELL 239          
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN2_ORYSJ (Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.110e-84
Identity = 145/214 (67.76%), Postives = 174/214 (81.31%), Query Frame = 2
Query:  161 NYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            +YG ALSKS+LYFE+QRSG LP +QR+ WR +SGL DG   GVDLVGGYYDAGDNVKFGLPMAFT+TM++W VI+YG E++ AGE  HA+EAIKWGTDYF KAH  P+VL+ EVGDGD+DH CWQRPEDMTTSR+AY++D +NPGSD+AGET       S+VFR  NP Y+  LL H++QLF+F DKYRG+YD+SI V + YY S SGY DELL
Sbjct:   40 DYGMALSKSILYFEAQRSGVLPGSQRIAWRANSGLADGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGEEMAAAGELGHAVEAIKWGTDYFAKAHPEPNVLYAEVGDGDSDHNCWQRPEDMTTSRQAYRLDPQNPGSDLAGETAAAMAAASLVFRSSNPGYADQLLQHSKQLFDFADKYRGRYDNSITVARNYYGSFSGYGDELL 253          
BLAST of FC878985 vs. ExPASy Swiss-Prot
Match: GUN15_ORYSJ (Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.500e-81
Identity = 147/236 (62.29%), Postives = 179/236 (75.85%), Query Frame = 2
Query:   95 FGLLFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELL 802
            FGLL     + L  +       +Y  AL KS+LYF++QRSG LP NQRV+WR  SGL DG   GVDLVGGYYDAGDNVKFGLPMAFT+TM+SW +++YG +++ AGE  +A++A+KWGTDYFIKAH  P VL+ EVGDGDTDH CWQRPEDMTTSR+A++VD ++PGSD+A ET       SIVFR   P Y++LLL H++QLFEF DKYRGKYD+SI V + YY S SGY DELL
Sbjct:   14 FGLLALASMVKLGFVAG--GGHDYAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSFSGYGDELL 247          
The following BLAST results are available for this feature:
BLAST of FC878985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN11_ARATH2.541e-10581.40Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32... [more]
GUN7_ORYSJ1.443e-10080.37Endoglucanase 7 OS=Oryza sativa subsp. japonica GN... [more]
GUN5_ORYSJ5.484e-10074.78Endoglucanase 5 OS=Oryza sativa subsp. japonica GN... [more]
GUN16_ORYSJ5.484e-10078.97Endoglucanase 16 OS=Oryza sativa subsp. japonica G... [more]
GUN22_ORYSJ2.722e-9977.57Endoglucanase 22 OS=Oryza sativa subsp. japonica G... [more]
GUN21_ORYSJ8.775e-9072.56Endoglucanase 21 OS=Oryza sativa subsp. japonica G... [more]
GUN6_ARATH7.429e-8967.83Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g643... [more]
GUN19_ARATH1.830e-8766.09Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11... [more]
GUN2_ORYSJ1.110e-8467.76Endoglucanase 2 OS=Oryza sativa subsp. japonica GN... [more]
GUN15_ORYSJ1.500e-8162.29Endoglucanase 15 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA87BA12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA87BA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878985 ID=FC878985; Name=FC878985; organism=Citrus clementina; type=EST; length=804bp
TGAAGCCATAGAAATGGAGAGATCAATAGAAATGGAGGAGAAAAGACAAG
AGCAGTGCGTGGTGGTGAAGCAACCAAAATATTTCCAAATTTCATTTGGT
TTATTATTTTACATGATGGCTCTGACCTTACCCCTAATAGTACAATGTCA
TGACTCCTTCAACTACGGCGATGCTCTCTCCAAGAGTCTCCTCTACTTCG
AATCACAACGCTCCGGCCGGTTGCCGCACAACCAAAGAGTCACCTGGCGC
CACCACTCCGGCCTCACCGACGGCCTAGAACAAGGAGTGGACTTGGTGGG
AGGGTACTATGATGCTGGTGACAATGTGAAGTTTGGTTTGCCAATGGCAT
TTACTATAACAATGCTCTCCTGGGGAGTTATTCAGTATGGTGGAGAAATT
TCCGACGCTGGCGAGTATCATCATGCAATCGAGGCCATCAAGTGGGGAAC
TGATTATTTCATCAAAGCTCACACTCACCCTCATGTATTATGGGTTGAGG
TGGGTGATGGAGACACCGATCACTACTGTTGGCAGCGGCCGGAAGACATG
ACGACGTCGCGGCGTGCTTACAAAGTAGACGAGAGAAACCCCGGCTCGGA
TGTCGCCGGAGAGACGGCAGCGGCAATGGCGGCAGCATCAATTGTGTTTA
GGAAACTAAACCCACATTACTCTCACCTACTATTGCACCACGCGCAACAG
TTGTTTGAGTTTGGTGACAAGTACAGAGGGAAATACGACAGTAGTATAGA
GGTAGTGAAGGGGTACTATCCGTCGGTTAGTGGATACATGGACGAGTTGT
TATG
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