FC878986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: WIPI3_XENTR (WD repeat domain phosphoinositide-interacting protein 3 OS=Xenopus tropicalis GN=wdr45l PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26 Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 568 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL R+RIVVVL Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGYVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVL 116
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: WIPI3_CHICK (WD repeat domain phosphoinositide-interacting protein 3 OS=Gallus gallus GN=WDR45L PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26 Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 568 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL R+RIVVVL Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNADPLKEKEKQEFPEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVL 116
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: WIPI3_XENLA (WD repeat domain phosphoinositide-interacting protein 3 OS=Xenopus laevis GN=wdr45l PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.563e-26 Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 568 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL R+RIVVVL Sbjct: 13 LLYSGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVSYVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVL 116
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: WIPI3_PONAB (WD repeat domain phosphoinositide-interacting protein 3 OS=Pongo abelii GN=WDR45L PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.653e-26 Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 568 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL R+RIVVVL Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVL 116
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: WIPI3_MOUSE (WD repeat domain phosphoinositide-interacting protein 3 OS=Mus musculus GN=Wdr45l PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.653e-26 Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 568 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL R+RIVVVL Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVL 116
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: WIPI3_HUMAN (WD repeat domain phosphoinositide-interacting protein 3 OS=Homo sapiens GN=WDR45L PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.653e-26 Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 568 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL R+RIVVVL Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVL 116
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: WIPI3_DANRE (WD repeat domain phosphoinositide-interacting protein 3 OS=Danio rerio GN=wdr45l PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.077e-26 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 568 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 L+ +NQD+GCFA G GFR+YN +P KE + + GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL R+RIVVVL Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKHEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVL 116
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: HSV2_YARLI (SVP1-like protein 2 OS=Yarrowia lipolytica GN=HSV2 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.023e-17 Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 547 SDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 + +++ +++ ++NQD CFA + GFR+Y +P +R+ GG +++ML R N LA+VG G N ++P K++IWDD +S+ F S V +V LSR +IVVVL Sbjct: 10 ASMEDQPILNAAFNQDSACFAICHNRGFRVYVTDPMDLRVQREFDDGGIGVIQMLHRTNYLAVVGGGSNPKFPQNKLVIWDDLKSKPALSLEFLSPVLNVLLSRTKIVVVL 120
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: ATG18_YARLI (Autophagy-related protein 18 OS=Yarrowia lipolytica GN=ATG18 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 577 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 VS+NQDY C + GT G++IYNC+PF + F + GG IVEMLF +++A+VG GD Q P ++ I + + I E F + V V+L+R+R+VV+L Sbjct: 8 VSFNQDYSCVSVGTPQGYKIYNCDPFGKCFSK--ADGGMGIVEMLFCTSLIAVVGMGDQPQNSPRRLKIVNTKRQSTICELTFPTAVLGVRLNRQRLVVLL 106
BLAST of FC878986 vs. ExPASy Swiss-Prot
Match: HSV2_DEBHA (SVP1-like protein 2 OS=Debaryomyces hansenii GN=HSV2 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16 Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 559 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPF----KETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRERIVVVL 879 E++++++++NQD GCFA G GF +YN P K F + G + ML R N LALVG G N ++ K++IWDD + + F S V +V LSR RI+VVL Sbjct: 15 ELQILNINFNQDQGCFAVGHEYGFLVYNTNPIDIRVKRNFNINGHGSGIAHITMLHRTNYLALVGGGKNPKFANNKLVIWDDLKRKNSLNLEFMSPVLNVLLSRIRIIVVL 125 The following BLAST results are available for this feature:
BLAST of FC878986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878986 ID=FC878986; Name=FC878986; organism=Citrus clementina; type=EST; length=879bpback to top |