FC878990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878990 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.777e-18 Identity = 66/216 (30.56%), Postives = 92/216 (42.59%), Query Frame = 3 Query: 66 DGTITRDYSNYPSTAATPDPNDHTIAVFKDVPVNQSNKTWVRIFLPRQALDSSTKTKL---------PLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDALEVLHWIKTTQEHWLIQYADLS-SCFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPIVPPSSTD*LW 683 DGT R + + + N DV +++ R++ P A S + T L P+IV+ HGG+ SA + IY LC + AV+VSV+YR APE+R P AY D VL W+ ++ WL D F+ GDS GGN+ ++ FGG +RTESE RL + V D W Sbjct: 38 DGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS--WLRSKKDSKVRIFLAGDSSGGNIVHN-----VAVRAVESRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYW 246
BLAST of FC878990 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.669e-16 Identity = 67/226 (29.65%), Postives = 93/226 (41.15%), Query Frame = 3 Query: 63 ADGTITRDYSNYPSTAATPDPNDHTIAVFKDVPVNQSNKTWVRIF--------------LPRQAL----DSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDALEVLHWIKTTQEHWLIQYADLSS-CFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPIVPPSSTD*LW 683 ADGT RD Y + D ++QS VRI+ + R L D+ P+I++ HGG+ + SA++ IY LC V+VSV+YR APEHR P AY D L W+ + + ++ D + F+ GDS GGN+A+H FGG +RTESE RL + V D W Sbjct: 37 ADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS--QPFMRSGGDAQARVFLSGDSSGGNIAHH-----VAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYW 255
BLAST of FC878990 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15 Identity = 64/221 (28.96%), Postives = 92/221 (41.63%), Query Frame = 3 Query: 66 DGTITRDYSNY--PSTAATPDPNDHTIAVFKDVPVNQSNKTWVRIFLPRQALDS------------STKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDALEVLHWIKTTQEHWLIQYADLS-SCFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPIVPPSSTD*LW 683 DG+ RD + + A P D VF V+ + RI+ P L ST +P++++ HGG+ SA + IY C + V+VSVDYR +PEHR P AY D L+W+K+ WL D + ++ GDS GGN+A++ FGG +RT+SE L + V D W Sbjct: 38 DGSFNRDLAEFLDRKVPANSFPLD---GVFSFDHVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS--RVWLQSGKDSNVYVYLAGDSSGGNIAHN-----VAVRATNEGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYW 248
BLAST of FC878990 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14 Identity = 62/218 (28.44%), Postives = 88/218 (40.37%), Query Frame = 3 Query: 66 DGTITRDYSNYPSTAATPDPNDHTIAVFKDVPVNQSNKTWVRIFLPRQALDSSTKTKL-----------PLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDALEVLHWIKTTQEHWLIQYADLS-SCFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPIVPPSSTD*LW 683 DGT R + Y T + N DV +++ R++ P A + L P+I++ HGG+ SA + IY LC + V+VSV+YR APE+ P AY D L+W+ + WL D F+ GDS GGN+A++ FGG +RTESE L + V D W Sbjct: 38 DGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS--RSWLKSKKDSKVHIFLAGDSSGGNIAHN-----VALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYW 248 The following BLAST results are available for this feature:
BLAST of FC878990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878990 ID=FC878990; Name=FC878990; organism=Citrus clementina; type=EST; length=685bpback to top |