FC878998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_ARATH (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Arabidopsis thaliana GN=At2g03690 PE=2 SV=1) HSP 1 Score: 362.459 bits (929), Expect = 2.009e-99 Identity = 169/225 (75.11%), Postives = 193/225 (85.78%), Query Frame = 3 Query: 228 IMIQGARVQLNGWQQXXXXXXXXXXXLLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVGHAWDLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSPAAP 902 ++I+ ARV L+ WQQ L+DPRRADLIAALGETTG+PAFE VL+RMK+S EGRA+LLERPRV+ E+VGHAWDLP NTFGAAYA FMGSRNFSPDDRPPVRFM+TDELAYVA RAREVHD WHTLFGLPTNLIGES+LKVIEF+QMYLPMC LSVIGG+ RF+EKQR +F +HY PWA+RAG Q TDLMCVYYE+HF EDLE +R+KWGI+P+P P Sbjct: 1 MIIERARVPLSRWQQAAVAMGSALGALVDPRRADLIAALGETTGKPAFEMVLERMKKSEEGRAILLERPRVVSEQVGHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVATRAREVHDLWHTLFGLPTNLIGESSLKVIEFEQMYLPMCMLSVIGGTVRFNEKQRSMFLKHYLPWAVRAGRQCTDLMCVYYERHFSEDLEQVRRKWGIIPAPQHP 225
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_AEDAE (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Aedes aegypti GN=AAEL014646 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.696e-48 Identity = 95/194 (48.97%), Postives = 128/194 (65.98%), Query Frame = 3 Query: 306 LLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVGH--AWDLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 881 L+DPRR D+IA LGETTG PA E++ +M+ S EGR +L ++PR+ V LP NTFG Y SFM +PD R V+FMD ELAYV R RE HD HT+FG+PTN++GE A+K +E + LPMC+ I G+ R KQR+ + Q Y PWA+RAG ++ LMCVY+E+ + +D+E+LRK+ I Sbjct: 75 LVDPRRHDMIACLGETTGVPALENIRDQMRNSDEGRQILEDKPRINTRTVNMDALKKLPENTFGYQYVSFMEKYEITPDSRMEVKFMDDPELAYVMTRYRETHDLVHTVFGMPTNMLGEVAIKWVEAINIGLPMCYGGAIFGAFRLRPKQRQNYLQRYLPWALRAGQRARPLMCVYWEKRWEQDIEELRKELNI 268
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_DROAN (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila ananassae GN=GF24309 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.373e-44 Identity = 87/214 (40.65%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 246 RVQLNGWQQXXXXXXXXXXXLLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVGHAW--DLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 881 R++++ +Q+ LLDPRR D+IA LGETTG A E++L M+ S EG+ ++ E+PR+ + LP ++FGAAY F+ +PD R VRF++ +LAY+ R RE HD HT+ G+PTN++GE A+K +E LPMC+ + G+ R KQR+ + +HY PWA+ G +S LM VY+E+ + + L+DLR + GI Sbjct: 47 RIEISPFQRVILGAGSSIAALLDPRRHDMIACLGETTGEGALENILDTMQASEEGQRIMAEKPRIHTSTIDFKLLESLPADSFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYRECHDLIHTVLGMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLPWALENGKRSKPLMPVYWEKRWEQKLQDLRAELGI 260
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_DROYA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila yakuba GN=GE22150 PE=3 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 3.483e-43 Identity = 84/214 (39.25%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 246 RVQLNGWQQXXXXXXXXXXXLLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVGHAW--DLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 881 R++++ +Q+ LLDPRR D+IA LGETTG A ++L M+ S EG+ ++ ++PR+ + + LPP+TFGAAY F+ +PD R VRF++ +LAY+ R RE HD HT+ +PTN++GE A+K +E LPMC+ + G+ R KQR+ + +HY PWA+ G +S LM VY+E+ + +++ +LR + GI Sbjct: 49 RIEISPFQRVFLGAGSSIAALLDPRRHDMIACLGETTGEDALLTILDTMQASEEGQRIMADKPRIHTSTIDFKYLETLPPDTFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYRECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLPWALENGKRSKPLMPVYWEKRWEQNIHELRSELGI 262
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_DROER (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila erecta GN=GG15811 PE=3 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 5.940e-43 Identity = 83/214 (38.79%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 246 RVQLNGWQQXXXXXXXXXXXLLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVGHAW--DLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 881 R++++ +Q+ LLDPRR D+IA LGETTG A ++L M+ S EG+ ++ ++PR+ + + LPP+TFGAAY F+ +PD R VRF++ +LAY+ R RE HD HT+ +PTN++GE ++K +E LPMC+ + G+ R KQR+ + +HY PWA+ G ++ LM VY+E+ + +++ DLR + GI Sbjct: 49 RIEISPFQRVFLAAGSSIAALLDPRRHDMIACLGETTGEDALWTILDSMQASEEGQRIMADKPRIHTSTIDFKYLETLPPDTFGAAYVKFLKDNQVTPDSRMAVRFLEEPKLAYLMTRYRECHDLIHTVLDMPTNMLGEVSVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLPWALENGKRTKPLMPVYWEKRWEQNIHDLRSELGI 262
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_DROWI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila willistoni GN=GK18052 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.013e-42 Identity = 89/219 (40.64%), Postives = 131/219 (59.82%), Query Frame = 3 Query: 246 RVQLNGWQQXXXXXXXXXXXLLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVG--HAWDLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGIVPSPA 896 R+++ +Q+ +LDPRR D+IA LGETTG A ++L M+ S EG+ +L+++PR+ + LPP+TFGAAY F+ N +PD R PVRF++ +LAY+ R RE HD HT+ +PTN++GE A+K +E LPMC+ + G+ R KQR+ + + Y PWAI G + LM VY+EQ + ++L DL KK + PA Sbjct: 40 RIEITPFQRMLLGAGSSVAAILDPRRHDMIACLGETTGEGALWNILDTMEASEEGQRILIDKPRIHTSTIDFKRLETLPPDTFGAAYVKFLKDNNVTPDSRMPVRFLEDPKLAYLMTRYRECHDLIHTVLNMPTNMLGEVAVKWVEALNTNLPMCYGGAVFGAVRLRPKQRREYLKRYLPWAIDNGKRMKPLMPVYWEQRWEQNL-DLAKKTSPIMLPA 257
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_DROSI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila simulans GN=GD12405 PE=3 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.948e-42 Identity = 82/214 (38.32%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 246 RVQLNGWQQXXXXXXXXXXXLLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVGHAW--DLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 881 R++++ +Q+ LL+PRR D+IA LGETTG A ++L M+ S EG+ ++ ++PR+ + + LPP+TFGAAY F+ +PD R VRF++ +LAY+ R RE HD HT+ +PTN++GE A+K +E LPMC+ + G+ R KQR+ + +HY PWA+ G ++ LM VY+E+ + +++ +LR + GI Sbjct: 49 RIEISPFQRLFLGTGSSIAALLNPRRHDMIACLGETTGEDALWTILDTMQASEEGQRIMADKPRIHTSTIDFKYLETLPPDTFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYRECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLPWALENGKRAKPLMPVYWEKRWEQNIHELRSELGI 262
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_DROSE (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila sechellia GN=GM24332 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.948e-42 Identity = 82/214 (38.32%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 246 RVQLNGWQQXXXXXXXXXXXLLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVGHAW--DLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 881 R++++ +Q+ LL+PRR D+IA LGETTG A ++L M+ S EG+ ++ ++PR+ + + LPP+TFGAAY F+ +PD R VRF++ +LAY+ R RE HD HT+ +PTN++GE A+K +E LPMC+ + G+ R KQR+ + +HY PWA+ G ++ LM VY+E+ + +++ +LR + GI Sbjct: 49 RIEISPFQRLFLGAGSSIAALLNPRRHDMIACLGETTGEDALWTILDTMQASEEGQRIMADKPRIHTSTIDFKYLETLPPDTFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYRECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLPWALENGKRAKPLMPVYWEKRWEQNIHELRSELGI 262
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_DROME (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila melanogaster GN=CG32174 PE=3 SV=3) HSP 1 Score: 172.555 bits (436), Expect = 2.948e-42 Identity = 82/214 (38.32%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 246 RVQLNGWQQXXXXXXXXXXXLLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVGHAW--DLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 881 R++++ +Q+ LL+PRR D+IA LGETTG A ++L M+ S EG+ ++ ++PR+ + + LPP+TFGAAY F+ +PD R VRF++ +LAY+ R RE HD HT+ +PTN++GE A+K +E LPMC+ + G+ R KQR+ + +HY PWA+ G ++ LM VY+E+ + +++ +LR + GI Sbjct: 49 RIEISPFQRLFLGAGSSIAALLNPRRHDMIACLGETTGEDALWTILDTMQASEEGQRIMADKPRIHTSTIDFKYLETLPPDTFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYRECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLPWALENGKRTKPLMPVYWEKRWEQNIHELRSELGI 262
BLAST of FC878998 vs. ExPASy Swiss-Prot
Match: COQ4_DROPS (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=GA16732 PE=3 SV=3) HSP 1 Score: 170.244 bits (430), Expect = 1.463e-41 Identity = 82/214 (38.32%), Postives = 127/214 (59.35%), Query Frame = 3 Query: 246 RVQLNGWQQXXXXXXXXXXXLLDPRRADLIAALGETTGRPAFESVLQRMKRSPEGRAVLLERPRVIYEKVG--HAWDLPPNTFGAAYASFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFQQMYLPMCFLSVIGGSARFSEKQRKLFFQHYFPWAIRAGMQSTDLMCVYYEQHFHEDLEDLRKKWGI 881 R+++ +Q+ +LDPRR D+IA LGETTG A +++ M S EG+ +++E+PR+ + LP +TFGAAY F+ +PD R VRF++ +LAY+ R RE HD HT+ +PTN++GE A+K +E LPMC+ + G+ R KQR+ + +HY PWA+ G Q LM VY+E+ + +++ +LR + GI Sbjct: 48 RIEITTFQRMLLGAGSSIAAILDPRRHDMIACLGETTGEDALWNIMDTMHESEEGQRIMVEKPRIHTSTIDFKRLESLPADTFGAAYVKFLKDNKVTPDSRMAVRFLEDPKLAYLMTRYRECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLPWALENGKQMKPLMPVYWEERWEQNVNELRAELGI 261 The following BLAST results are available for this feature:
BLAST of FC878998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878998 ID=FC878998; Name=FC878998; organism=Citrus clementina; type=EST; length=932bpback to top |