FC878999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878999 vs. ExPASy Swiss-Prot
Match: FCL2_ARATH (Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 4.142e-41 Identity = 85/105 (80.95%), Postives = 92/105 (87.62%), Query Frame = 3 Query: 108 SNKDSCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAF 422 S S SF+ EKSAKIFVAGHRGLVGSAIVRKL GFTNL+LRTH+ELDLT QSDVESFFA EKP YVI+AAAKVGGIHANNTYPA+FI +NLQIQTNVI SA+ Sbjct: 7 SEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAY 111
BLAST of FC878999 vs. ExPASy Swiss-Prot
Match: FCL1_ARATH (GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN=GER1 PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 7.812e-40 Identity = 80/97 (82.47%), Postives = 90/97 (92.78%), Query Frame = 3 Query: 132 LSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAF 422 +S+KSAKIFVAGHRGLVGSAIVRKL GFTNL+L+THAELDLTRQ+DVESFF+ EKP YVI+AAAKVGGIHANNTYPA+FI +NLQIQTNVI SA+ Sbjct: 1 MSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAY 97
BLAST of FC878999 vs. ExPASy Swiss-Prot
Match: FCL1_ORYSJ (Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica GN=Os06g0652400 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.969e-39 Identity = 76/100 (76.00%), Postives = 93/100 (93.00%), Query Frame = 3 Query: 126 SFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 425 SFL++K K+FVAGHRGLVGSAI+R L+SLGFTN+++RTHAELDLTRQSDVE+FFAAE P YV++AAAKVGGIHAN+T+PA+FIA NLQIQTNV+D+A + Sbjct: 12 SFLADKGGKVFVAGHRGLVGSAILRHLVSLGFTNVVVRTHAELDLTRQSDVEAFFAAELPRYVVLAAAKVGGIHANSTFPADFIAANLQIQTNVVDAALK 111
BLAST of FC878999 vs. ExPASy Swiss-Prot
Match: FCL2_ORYSJ (Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica GN=Os06g0652300 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.590e-32 Identity = 69/116 (59.48%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 78 AADPDLLMGDSNKDSCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 425 A D D GD + + SFL +KSAK+F+AGHRG+VGSA+ RKL +LGFTN+++RT AELDL Q+ VE+FFAAE P YVI+AAAKVGG+HA++ PAE++ NL+I NV+D+A R Sbjct: 15 AGDAD---GDGDAAAVSFLGDKSAKVFIAGHRGMVGSAVHRKLDALGFTNVVVRTRAELDLACQAAVEAFFAAELPRYVILAAAKVGGVHASSAAPAEYLTENLRITVNVVDAARR 127
BLAST of FC878999 vs. ExPASy Swiss-Prot
Match: FCL_ECOLI (GDP-L-fucose synthetase OS=Escherichia coli (strain K12) GN=fcl PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 6.876e-20 Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 3 Query: 150 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSA 419 ++F+AGHRG+VGSAI R+L G L+LRT EL+L V FFA+E+ V +AAAKVGGI ANNTYPA+FI N+ I++N+I +A Sbjct: 5 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAA 94
BLAST of FC878999 vs. ExPASy Swiss-Prot
Match: Y4AF_RHISN (Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234) GN=NGR_a00420 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.000e-19 Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = 3 Query: 150 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 425 +I+VAGH+G+VGSAI+R L S +++ +LDLTRQ +VE F EKP VI+AAAKVGGI AN+T PA+FI NL ++ NVI+ +FR Sbjct: 10 RIWVAGHKGMVGSAIIRSLASED-CEVIVADRQKLDLTRQEEVEKFLLKEKPHAVIMAAAKVGGILANDTMPADFIYQNLIMEANVIEGSFR 100 The following BLAST results are available for this feature:
BLAST of FC878999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878999 ID=FC878999; Name=FC878999; organism=Citrus clementina; type=EST; length=425bpback to top |