FC881307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSNA_ARATH (Presenilin-like protein At1g08700 OS=Arabidopsis thaliana GN=At1g08700 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.962e-70 Identity = 140/225 (62.22%), Postives = 162/225 (72.00%), Query Frame = 1 Query: 58 SLSGASDP-FRTAANLVYLERPDDSSTQKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTKLPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEELPALVYEARPTVS--ENERNRRSGLRFLL 723 SLS SDP R+AANL+Y+E P DS+T KLEG++ NA+VFV+LIA VTF+LVLL+YYNFTNFLK+Y+RFSAFFVL GTMGG PVD+ TCF+LLFNFTI+G LS+F+GGIPI+LRQ YMV MGI++AAWFTKLPEWTTW PGGPLKLLVELASSRDEELPA+VYEARPTVS RNR S LR L+ Sbjct: 33 SLSVTSDPQIRSAANLIYIENPSDSTTVKLEGSLANAIVFVVLIAAVTFILVLLFYYNFTNFLKHYMRFSAFFVL--------------GTMGGAIFLSIIQHFSIPVDSITCFILLFNFTILGTLSVFAGGIPIVLRQCYMVVMGIVVAAWFTKLPEWTTWFILVALALYDLVAVLAPGGPLKLLVELASSRDEELPAMVYEARPTVSSGNQRRNRGSSLRALV 243
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSNB_ARATH (Presenilin-like protein At2g29900 OS=Arabidopsis thaliana GN=At2g29900 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.408e-40 Identity = 89/211 (42.18%), Postives = 120/211 (56.87%), Query Frame = 1 Query: 64 SGASDPFRTAANLVYLERPDDSSTQKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTKLPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEELPALVYEARPTVSENERN 696 S +S F + A Y E DSS K GA+LN++VFV I + TF+LVLL+Y FLK Y+ FSAF VL G +GG P+D+ T +LLFNF++VGV ++F IL+ Q Y+V +G+++A +FT LPEWTTW P GPL+LLVE+A SRDE++PALVYEARP + + R+ Sbjct: 44 SSSSASFSSIATAAYSESDSDSSWDKFVGALLNSVVFVAAITVATFVLVLLFYLRCVKFLKFYMGFSAFIVL--------------GNLGGEILVLLIDRFRFPIDSITFLILLFNFSVVGVFAVFMSKFSILITQGYLVWIGVLVAYFFTLLPEWTTWVLLVALALYDIAAVLLPVGPLRLLVEMAISRDEDIPALVYEARPVIRNDSRS 240
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSNA_DICDI (Presenilin-A OS=Dictyostelium discoideum GN=psenA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.515e-18 Identity = 48/172 (27.91%), Postives = 90/172 (52.33%), Query Frame = 1 Query: 151 AVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTKLPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEELPALVYEA 666 +V+N+L+F+ +I + T ++V+LY + L ++ ++ +L G GG +D T ++++NF++ G++ +F P LL Q Y++ + ++MA +F++LP+WTTW PGGPL++L+E A R+E +PA++Y A Sbjct: 227 SVVNSLIFLAVIILSTTIMVVLYKFKLMKALYAWLMGTSILLL--------------GVFGGFLFLILLAYLNLGLDYVTFVIVVWNFSVGGIVCIFWYS-PKLLNQGYLISISVLMALFFSRLPDWTTWGILSIVSIYDIFAVLCPGGPLRILIETAQKRNENIPAMIYNA 383
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSN1_XENLA (Presenilin-1 OS=Xenopus laevis GN=psen1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18 Identity = 62/198 (31.31%), Postives = 102/198 (51.52%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEEL-PALVYEA 666 R L+Y +D+ + Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L F++ +LG + VD T +L++NF +VG++ + G P+LL+QAY++ + +MA F K LPEWTTW P GPL++LVE A R+E L PAL+Y + Sbjct: 74 RFDGQLIYTPFTEDTESVGQRALNSILNATIMISVIIVMTILLVVLYKYRCYKVIHGWLIISSLLLLFFFSYI------YLGEV--------FKTYNVAVDYITLALLIWNFGVVGMICIHWKG-PLLLQQAYLIMISALMALVFIKYLPEWTTWLILAVISVYDLVAVLSPKGPLRMLVETAQERNETLFPALIYSS 256
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSN1_MICMU (Presenilin-1 OS=Microcebus murinus GN=PSEN1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18 Identity = 63/198 (31.82%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEEL-PALVYEA 666 R L+Y +D+ T Q+ +VLNA + + +I ++T LLV+LY Y + ++ S+ +L F+ +LG + VD T +L++NF +VG++S+ G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSVLNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFI------YLGEV--------FKTYNVAVDYITVALLIWNFGVVGMISIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSN1_PONAB (Presenilin-1 OS=Pongo abelii GN=PSEN1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17 Identity = 62/198 (31.31%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEEL-PALVYEA 666 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L F+ +LG + VD T +L++NF +VG++S+ G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFI------YLGEV--------FKTYNVAVDYITVALLIWNFGVVGMISIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSN1_HUMAN (Presenilin-1 OS=Homo sapiens GN=PSEN1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17 Identity = 62/198 (31.31%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEEL-PALVYEA 666 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L F+ +LG + VD T +L++NF +VG++S+ G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFI------YLGEV--------FKTYNVAVDYITVALLIWNFGVVGMISIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSN1_MACFA (Presenilin-1 OS=Macaca fascicularis GN=PSEN1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17 Identity = 62/198 (31.31%), Postives = 99/198 (50.00%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEEL-PALVYEA 666 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L F+ LG + VD T +L++NF +VG++S+ G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFKN------LGEV--------FKTYNVAVDYITVALLIWNFGVVGMISIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSN1_MOUSE (Presenilin-1 OS=Mus musculus GN=Psen1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 62/198 (31.31%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEEL-PALVYEA 666 R L+Y +D+ T Q+ ++LNA + + +I I+T LLV+LY Y + ++ S+ +L F+ +LG + VD T +L++NF +VG++++ G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVIMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFI------YLGEV--------FKTYNVAVDYVTVALLIWNFGVVGMIAIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC881307 vs. ExPASy Swiss-Prot
Match: PSN1_RAT (Presenilin-1 OS=Rattus norvegicus GN=Psen1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17 Identity = 61/198 (30.81%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 85 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLVDFAHAEVLLCSWLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGGPLKLLVELASSRDEEL-PALVYEA 666 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L F+ +LG + VD T +L++NF +VG++++ G P+ L+QAY++ + +MA F K LPEWT W P GPL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIVSSLLLLFFFSFI------YLGEV--------FKTYNVAVDYITVALLIWNFGVVGMIAIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290 The following BLAST results are available for this feature:
BLAST of FC881307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC881307 ID=FC881307; Name=FC881307; organism=Citrus clementina; type=EST; length=725bpback to top |