FC881947

Overview
NameFC881947
Unique NameFC881947
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length584
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC881947 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.030e-39
Identity = 78/187 (41.71%), Postives = 119/187 (63.64%), Query Frame = 3
Query:    3 RNRHRFHDWVAEQLSGTPSSTIQVNSFLNLSNGVATADPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPSTM---VENSYFIEAFNDATEICWKRFMSPSCCVLESKK 554
            +N HR   W+++ +  +PS+T Q++  L     + T +P+ V+H+L   F NY KG+ F+  L + LG GIFN +GP W  QR++ASHEF+TKS++NF+  +V++E+T RL+P L  +     ++D Q +L+ FTF+N+CN+AFG DP  +      S F EA+ DATEI  KRF  P   + + KK
Sbjct:   62 KNLHRRIQWLSDIVQISPSATFQLDGTLG-KRQIITGNPSTVQHILKNQFSNYQKGTTFTNTLSDFLGTGIFNTNGPNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILTSSTQTNNILDFQDILQRFTFDNICNIAFGYDPEYLTPSTNRSKFAEAYEDATEISSKRFRLPLPIIWKIKK 247          
BLAST of FC881947 vs. ExPASy Swiss-Prot
Match: C94A2_VICSA (Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.300e-31
Identity = 70/173 (40.46%), Postives = 109/173 (63.01%), Query Frame = 3
Query:    6 NRHRFHDWVAEQLSGTPSSTIQVNSFLNLSNGVATADPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPSTMVEN---SYFIEAFNDATEICWKR 515
            N HR   W ++ L   PSST  ++     +  V TA PA V+H+L TNF  Y KG  F   + + LGDGIFNADG +W  QR+I+SHEF+T+SL+ F+  VV+ E+++RL+P L  A +    +D Q +L+  TF+N+C +AFG DP  ++ +     F +AF++++++  +R
Sbjct:   58 NFHRRIQWTSDILQTIPSSTFVLHRPFG-ARQVFTAQPAVVQHILRTNFTCYGKGLTFYQSINDFLGDGIFNADGESWKFQRQISSHEFNTRSLRKFVETVVDVELSDRLVPVLSQASNSQTTLDFQDILQRLTFDNICMIAFGYDPEYLLPSLPEIPFAKAFDESSQLSIER 229          
BLAST of FC881947 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28
Identity = 71/180 (39.44%), Postives = 98/180 (54.44%), Query Frame = 3
Query:    6 NRHRFHDWVAEQL---SGTPSSTIQVNSFLNLSNG--VATADPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPSTM---VENSYFIEAFNDATEICWKRFM 521
            NR R HDW+A+ L    GT  +   V  F+  + G    T  P NV H+L T F NY KG  + A   +LLG GIFN+DG TW +QRK A+ EF+T++L+  +   V   I  RL   L  A      +DLQ +    TF+N+C + FG DP T+   + ++ F  AF+ ATE   KR +
Sbjct:   48 NRSRIHDWIADNLRATGGTYQTCTMVIPFVAKAQGFYTVTCHPKNVEHILKTRFDNYPKGPMWRAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNGTIKNRLWLILDRAVQNNKPVDLQDLFLRLTFDNICGLTFGKDPETLSLDLPDNPFSVAFDTATEATLKRLL 227          
BLAST of FC881947 vs. ExPASy Swiss-Prot
Match: C86A2_ARATH (Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27
Identity = 74/182 (40.66%), Postives = 99/182 (54.40%), Query Frame = 3
Query:    9 RHRFHDWVAEQL---SGTPSSTIQVNSFLNLSNGVATA--DPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPST----MVENSYFIEAFNDATEICWKRFMSP 527
            R R HDW+ E L    GT  + I    FL    G+ T   DP N+ H+L T F NY KG  + AV  + LG GIFN+DG TW  QRK A+ EF+T++L+  +   V   I  R  P L  A +    +DLQ ++   TF+N+C +AFG D  T    + EN  F  AF+ ATE   +RF+ P
Sbjct:   46 RDRMHDWITENLRACGGTYQTCICAVPFLAKKQGLVTVTCDPKNIEHMLKTRFDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRGIKLRFCPILETAQNNYEPVDLQDLILRLTFDNICGLAFGKDTRTCAPGLPENG-FASAFDRATEASLQRFILP 226          
BLAST of FC881947 vs. ExPASy Swiss-Prot
Match: C04C1_PINTA (Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.547e-19
Identity = 59/179 (32.96%), Postives = 96/179 (53.63%), Query Frame = 3
Query:    6 NRHRFHDWVAEQLSGTPSSTIQVNSFLNLSNGVATADPANVRHLLHTNFPNYVKGSRFSAVLRELLGDGIFNADGPTWTLQRKIASHEFSTKSLKNFITDVVESEITERLLPSLCIACDEGLVIDLQKVLEDFTFNNMCNVAFGVDPSTMVEN-------SYFIEAFNDATEICWKRFM 521
            N  R HD+  +Q     +  +   +     + V T DP NV H+L TNF NY KG+    ++++LLGDGIFN DG  W  QRK+AS EF++K LK+F + V  +    +L   L  A    L +++Q +    + +++C V FG+D +++  +       + F +AF+ A  + + R M
Sbjct:   49 NFERLHDYHTDQAQRYKTFRVVYPT----CSYVFTTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFNVDGDKWRQQRKLASSEFASKVLKDFSSGVFCNN-AAKLANILAQAAKLNLSVEMQDLFMRSSLDSICKVVFGIDINSLSSSKAESGPEASFAKAFDVANAMVFHRHM 222          
The following BLAST results are available for this feature:
BLAST of FC881947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
C94A1_VICSA1.030e-3941.71Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C94A2_VICSA2.300e-3140.46Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE... [more]
C86A1_ARATH6.927e-2839.44Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
C86A2_ARATH1.543e-2740.66Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CY... [more]
C04C1_PINTA1.547e-1932.96Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 P... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA33DB05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA33DB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC881947 ID=FC881947; Name=FC881947; organism=Citrus clementina; type=EST; length=584bp
TCCGCAACCGCCACCGCTTCCACGACTGGGTCGCCGAGCAGCTCTCCGGA
ACCCCATCTTCCACTATTCAAGTCAACTCCTTCCTCAACCTCTCCAATGG
CGTGGCCACCGCCGACCCCGCCAATGTCCGCCACTTGCTCCACACCAACT
TCCCCAACTACGTCAAAGGCTCCCGCTTCTCCGCCGTCCTCCGCGAGCTC
CTCGGCGACGGCATCTTCAACGCCGACGGACCCACCTGGACTCTCCAGCG
CAAGATCGCCAGCCACGAGTTCAGCACCAAGTCCCTCAAGAACTTCATAA
CGGACGTGGTCGAATCTGAGATCACCGAACGGCTCTTGCCGTCCCTGTGC
ATCGCCTGCGACGAGGGCTTGGTGATTGATTTGCAAAAAGTGTTGGAAGA
TTTCACTTTTAATAATATGTGCAACGTTGCATTCGGTGTTGATCCTTCTA
CTATGGTGGAAAATTCTTATTTTATTGAAGCATTTAACGACGCCACCGAG
ATTTGCTGGAAAAGATTCATGTCCCCCAGTTGCTGCGTTTTGGAAAGCAA
AAAGATTGCTCAATATTGAATCGGAGAAGCTCTT
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