FC883083

Overview
NameFC883083
Unique NameFC883083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length883
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_MICAN (Acetylglutamate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=argB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.339e-56
Identity = 116/184 (63.04%), Postives = 139/184 (75.54%), Query Frame = 1
Query:  280 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 828
            RV ILSE+LP+IQ+FRG+T+VVKYGGAAM  +  KD                  RPV+VHGGGPEIN WL + GIEP F+DGLRVTDA+TM++V MVLVGRVNK +V+LIN+AG  AVGL G DG L TARP      +GFVGEV+ VD +V+E LVNSG+IPVI+SVAADE GQ++NINADTV
Sbjct:   12 RVKILSEALPYIQEFRGRTVVVKYGGAAMNNSDIKDTVMRDIVFLSCVGV----RPVIVHGGGPEINSWLDKLGIEPQFKDGLRVTDADTMDVVEMVLVGRVNKEIVALINQAGGKAVGLCGKDGNLITARPVGKEG-IGFVGEVSSVDTSVVESLVNSGYIPVISSVAADETGQAHNINADTV 190          
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_SYNY3 (Acetylglutamate kinase OS=Synechocystis sp. (strain PCC 6803) GN=argB PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.263e-55
Identity = 117/185 (63.24%), Postives = 136/185 (73.51%), Query Frame = 1
Query:  271 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 825
            A  RV ILSE+LP+IQ F G+T+VVKYGGAAMK +   N                 RPV+VHGGGPEIN WL + GIEP F+DGLRVTDA TM+IV MVLVGRVNK LV+LIN+AG  AVGL G DG+L TAR   N   +GFVGEV+ VD  V+E LV SG+IPVI+SVAADEFGQ++NINADT
Sbjct:   12 AATRVKILSEALPYIQHFAGRTVVVKYGGAAMKDS---NLKDKVIRDIVFMASVGIRPVVVHGGGPEINTWLDKVGIEPQFKDGLRVTDAATMDIVEMVLVGRVNKELVNLINQAGGKAVGLCGKDGQLMTARTMTNK-DVGFVGEVSSVDARVVETLVKSGYIPVISSVAADEFGQAHNINADT 192          
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_ACAM1 (Acetylglutamate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=argB PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.069e-54
Identity = 112/186 (60.22%), Postives = 134/186 (72.04%), Query Frame = 1
Query:  271 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 828
            A  RV +LSE+LP+IQ F G+T+VVKYGGAAMK +                     RPVLVHGGGPEIN WL++ GIEP F  GLRVTDA TM++V MVLVGRVNK LVSLIN+AG +AVG+ G DG+L TARP   S  +GFVGEVA V+P +I  L++ GHIP+++SVA DE GQ YNINADTV
Sbjct:    4 ASDRVQVLSEALPYIQSFAGRTVVVKYGGAAMKDS---TLKATVIRDVVFMACVGLRPVLVHGGGPEINLWLEKLGIEPQFMKGLRVTDAPTMDVVEMVLVGRVNKELVSLINQAGGSAVGVCGKDGKLLTARPQGESG-IGFVGEVASVNPQLIHNLLDGGHIPIVSSVATDEEGQVYNINADTV 185          
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_NOSP7 (Acetylglutamate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=argB PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.491e-53
Identity = 108/184 (58.70%), Postives = 137/184 (74.46%), Query Frame = 1
Query:  280 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 828
            RV +LSE+LP+IQ+F G+T+VVKYGGAAMK +  KD                  RP++VHGGGPEIN WL + GIEP F++GLRVTDA TM++V MVLVGRVNK +V+LIN+AG  AVGL G DG LFTARP      +GFVGEV+ V+  +++ L ++G+IPV++SVAADE GQ+YNINADTV
Sbjct:   16 RVRVLSEALPYIQQFAGRTVVVKYGGAAMKDSTLKDKVIRDIVFLSCVGL----RPIVVHGGGPEINSWLDKLGIEPQFKNGLRVTDAATMDVVEMVLVGRVNKEIVALINQAGGLAVGLCGKDGNLFTARPQGQEG-IGFVGEVSNVNIKILDTLASNGYIPVVSSVAADETGQAYNINADTV 194          
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_SYNP6 (Acetylglutamate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=argB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.706e-52
Identity = 111/183 (60.66%), Postives = 130/183 (71.04%), Query Frame = 1
Query:  280 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 828
            RV ILSE+LP++Q+F G+T+VVKYGGAAMK   ++                  RPV+VHGGGPEIN WL R GIEP F +GLRVTDA+TME+V MVLVGRVNK +VS IN  G  AVG  G DGRL  ARP      +GFVGEV  V+  VIEPL+  G+IPVI+SVAADE GQS+NINADTV
Sbjct:   13 RVRILSEALPYLQQFAGRTVVVKYGGAAMK---QEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEG-IGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTV 191          
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_SYNE7 (Acetylglutamate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=argB PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.706e-52
Identity = 111/183 (60.66%), Postives = 130/183 (71.04%), Query Frame = 1
Query:  280 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 828
            RV ILSE+LP++Q+F G+T+VVKYGGAAMK   ++                  RPV+VHGGGPEIN WL R GIEP F +GLRVTDA+TME+V MVLVGRVNK +VS IN  G  AVG  G DGRL  ARP      +GFVGEV  V+  VIEPL+  G+IPVI+SVAADE GQS+NINADTV
Sbjct:   13 RVRILSEALPYLQQFAGRTVVVKYGGAAMK---QEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEG-IGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTV 191          
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_ANAVT (Acetylglutamate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=argB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.706e-52
Identity = 108/184 (58.70%), Postives = 135/184 (73.37%), Query Frame = 1
Query:  280 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 828
            RV +LSE+LP+IQ+F G+T+VVKYGGAAMK +  KD                  RP+LVHGGGPEIN WL + GIE  F++GLRVTDA TM++V MVLVGRVNK +VSLIN+AG  AVGL G DG L TARP      +GFVGEV+ V+  ++E L ++G+IPV++SVAAD+ GQ+YNINADTV
Sbjct:   16 RVQVLSEALPYIQQFAGRTVVVKYGGAAMKDSHLKDQVIRDIVFLSCVGL----RPILVHGGGPEINSWLDKLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVSLINQAGGLAVGLCGKDGNLITARPQGQEG-IGFVGEVSNVNIKILETLASNGYIPVVSSVAADDSGQAYNINADTV 194          
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_ANASP (Acetylglutamate kinase OS=Anabaena sp. (strain PCC 7120) GN=argB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.706e-52
Identity = 108/184 (58.70%), Postives = 135/184 (73.37%), Query Frame = 1
Query:  280 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 828
            RV +LSE+LP+IQ+F G+T+VVKYGGAAMK +  KD                  RP+LVHGGGPEIN WL + GIE  F++GLRVTDA TM++V MVLVGRVNK +VSLIN+AG  AVGL G DG L TARP      +GFVGEV+ V+  ++E L ++G+IPV++SVAAD+ GQ+YNINADTV
Sbjct:   16 RVQVLSEALPYIQQFAGRTVVVKYGGAAMKDSHLKDQVIRDIVFLSCVGL----RPILVHGGGPEINSWLDKLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVSLINQAGGLAVGLCGKDGNLITARPQGQEG-IGFVGEVSNVNIKILETLASNGYIPVVSSVAADDSGQAYNINADTV 194          
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_TRIEI (Acetylglutamate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=argB PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.469e-52
Identity = 108/193 (55.96%), Postives = 137/193 (70.98%), Query Frame = 1
Query:  253 TDTQTPAEF-RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 828
            TD +  +E  RV +LSE+LP+IQKF G+ IVVKYGGAAM+ +   N                 RP++VHGGGPEIN WL + GIEP F+DGLRVTDA+TME+V MVLVG+VNK +VSLIN+AG  AVGL G D  L  ARP      +GFVGEV+ V   +++ LV++G+IPV++SVA DE GQ+YN+NADTV
Sbjct:    5 TDLKNESEMSRVKVLSEALPYIQKFTGRKIVVKYGGAAMRDS---NVKDQVMRDIVLLSCVGIRPIVVHGGGPEINSWLGKLGIEPQFKDGLRVTDASTMEVVEMVLVGKVNKEIVSLINQAGGCAVGLCGKDASLIQARPE-GIEGIGFVGEVSNVKIDILQSLVDNGYIPVVSSVATDEQGQAYNLNADTV 193          
BLAST of FC883083 vs. ExPASy Swiss-Prot
Match: ARGB_PORYE (Acetylglutamate kinase OS=Porphyra yezoensis GN=argB PE=3 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51
Identity = 110/183 (60.11%), Postives = 130/183 (71.04%), Query Frame = 1
Query:  280 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 828
            RV +LSE+LP+IQ+F  + IV+KYGGAAMK NQK                   RP+LVHGGGPEINFWL R  I P F DG+RVTD  TM+IV MVLVGRVNK LV+ INK G  +VGLSG DG L T RP+   A LGFVGEV  +D  +++ L+N+ +IPVIASVAAD+ GQSYNINADTV
Sbjct:    7 RVKVLSEALPYIQQFSSRIIVIKYGGAAMK-NQK--LKDQVISDLVFLSFIGLRPILVHGGGPEINFWLDRLKILPKFDDGVRVTDQPTMDIVEMVLVGRVNKDLVATINKQGGKSVGLSGKDGLLITPRPN-GKANLGFVGEVQNIDTKLLKILINNNYIPVIASVAADKEGQSYNINADTV 185          
The following BLAST results are available for this feature:
BLAST of FC883083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_MICAN4.339e-5663.04Acetylglutamate kinase OS=Microcystis aeruginosa (... [more]
ARGB_SYNY31.263e-5563.24Acetylglutamate kinase OS=Synechocystis sp. (strai... [more]
ARGB_ACAM11.069e-5460.22Acetylglutamate kinase OS=Acaryochloris marina (st... [more]
ARGB_NOSP74.491e-5358.70Acetylglutamate kinase OS=Nostoc punctiforme (stra... [more]
ARGB_SYNP61.706e-5260.66Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_SYNE71.706e-5260.66Acetylglutamate kinase OS=Synechococcus elongatus ... [more]
ARGB_ANAVT1.706e-5258.70Acetylglutamate kinase OS=Anabaena variabilis (str... [more]
ARGB_ANASP1.706e-5258.70Acetylglutamate kinase OS=Anabaena sp. (strain PCC... [more]
ARGB_TRIEI8.469e-5255.96Acetylglutamate kinase OS=Trichodesmium erythraeum... [more]
ARGB_PORYE5.489e-5160.11Acetylglutamate kinase OS=Porphyra yezoensis GN=ar... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA55BA10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55BA10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC883083 ID=FC883083; Name=FC883083; organism=Citrus clementina; type=EST; length=883bp
AAGAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGGC
CGCCGCCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGT
CACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCC
ATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCG
CACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCG
TAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAA
TCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATTGTCGTCAAATA
CGGCGGCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCG
TCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGGCTCCGTCCTGTCTTG
GTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAAT
CGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGG
AGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCT
CTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGG
GCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCG
TTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCCTCTGGTAAAC
AGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATGAGTTTGGGCA
ATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTGGCGGCGGCAT
TGGGTGCTGAGAAGCTGATATTGTTAACTGATG
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