FC885345

Overview
NameFC885345
Unique NameFC885345
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length826
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 5.604e-87
Identity = 150/216 (69.44%), Postives = 176/216 (81.48%), Query Frame = 2
Query:  125 MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIXXXXXXXXXXXXXLVPGHDVVADELVVSDDAYFETNDLDQ 772
            MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++P +F+ I VTDIYKSEPWDLPDKS LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH GRAP GERTNWVMHEYRL+D+DL+KAGV Q+ +VLCRIFQKSG+GPKNGEQYGAP++              VP  D  ++ L ++DD Y + +D+D+
Sbjct:    1 MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAPYL---EEEWEEDGMTYVPAQDAFSEGLALNDDVYVDIDDIDE 212          
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44
Identity = 79/161 (49.07%), Postives = 109/161 (67.70%), Query Frame = 2
Query:  152 LAPGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQ 634
            L PGF FHP D EL+ +YLK+K+  + + +  I   DIYK EPWDLP K  + T+D +W+FF+  D+KY NGSR+NRAT  GYWK+TGKDR +    +T+G KKTLV+H GR P G RT W+MHEY + + + +     +D +VLCRI +++   P NG +
Sbjct:    9 LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDERECQACPDMKDAYVLCRITKRNDWIPGNGNE 169          
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.803e-43
Identity = 87/167 (52.10%), Postives = 111/167 (66.47%), Query Frame = 2
Query:  140 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPV--HHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDL----EKAGVAQDTFVLCRIFQKSGSGPK 622
            A  +L PGFRFHPTDEELV +YL RKV  +PL    I   D+YK +PWDLP+K+      KEWYFF+  D+KY NGSR NRA  +GYWK TG D+PV    + RTVG+KK LV++ G+AP G +T+W+MHEYRL D D     +K     D +VLCR++ K  +  K
Sbjct:   17 AELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGR--KEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181          
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.887e-42
Identity = 80/154 (51.95%), Postives = 111/154 (72.08%), Query Frame = 2
Query:  149 SLAPGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKT-RDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVH-HNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK 604
            S+ PGFRFHPTDEEL+ YYL++KV +  +  + I   D+ K EPWDL D+  + T    EWYFFS  DKKY  G+RTNRAT  G+WK TG+D+ +   N   +GM+KTLV+++GRAPHG++T+W+MHEYRL  D+++   V +D +V+CR+F K
Sbjct:    9 SVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLDQDNVD---VQEDGWVVCRVFMK 159          
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.036e-40
Identity = 82/165 (49.70%), Postives = 108/165 (65.45%), Query Frame = 2
Query:  122 LMGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHH--NTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSG 610
            L G E     L PGFRFHPTDEEL+ +YL  K+ H  L    I   D+ + EPW+LP+ +  K  ++EWYF+S+ D+KY  G RTNRAT  GYWK TGKD+ V      + VGMKKTLV++ GRAP G +T WVMHEYRL +D   +    ++ +V+CR+F K+G
Sbjct:   12 LAGEERNERGLPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMA--KMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHR-HTCKEEWVICRVFNKTG 173          
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.036e-40
Identity = 79/171 (46.20%), Postives = 107/171 (62.57%), Query Frame = 2
Query:  140 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTD----DDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYG 640
            + ++L PGFRFHPTDEEL+ YYL+ +   +P   + I   DIYK +PW LP+K+     + EWYFFS  ++KY NG R NRA   GYWK TG D+ +H  +  VG+KK LV++ GR P G +T+W+MHEYRL D           +  D +VLCRI++K G+     EQ G
Sbjct:    5 SQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFG--ENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLNEQEG 173          
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.766e-40
Identity = 82/163 (50.31%), Postives = 107/163 (65.64%), Query Frame = 2
Query:  152 LAPGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDD----LEKAGVAQDTFVLCRIFQKSGSGPKNG 628
            L PGFRFHPTDEELV +YL RK   + +    I   D+YK +PW+LP  +     +KEWYFFS  D+KY NGSR NR+   GYWK TG D+P+    + VG+KK LV++ G+AP GE+TNW+MHEYRL D D     +K  +  D +VLCRI+ K G+  + G
Sbjct:    7 LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYG--EKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI-GLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRG 166          
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.766e-40
Identity = 85/183 (46.45%), Postives = 113/183 (61.75%), Query Frame = 2
Query:   89 NRILYFCNSLRLMGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDL-----EKAGVAQDTFVLCRIFQKSGSGPK 622
            NRIL          +  A  +L  GFRFHPTDEELV++YL R+    P+    I   D+YK  PW+LP+ +     +KEWYFFS  D+KY NGSR NRA   GYWK TG D+P+    +T+G+KK LV++ G+AP G +TNW+MHEYRL + D      +K  +  D +VLCRI+ K G+  K
Sbjct:   29 NRILSTRKQQGTFPKMKAELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYG--EKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEK 208          
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 3.013e-40
Identity = 74/150 (49.33%), Postives = 108/150 (72.00%), Query Frame = 2
Query:  158 PGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDK-EWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK 604
            PGFRFHPTDEELV YYL++KV  + +  + I   D+YK EPWDL +   +   ++ +WYFFS  DKKY  G+RTNRAT+ G+WK TG+D+ ++     +GM+KTLV++ GRAP+G++++W+MHEYRL  D  E     ++ +V+CR+F+K
Sbjct:    9 PGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETD--ENGTPQEEGWVVCRVFKK 156          
BLAST of FC885345 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.935e-40
Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 2
Query:  152 LAPGFRFHPTDEELVRYYLKRKVCHRPLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHN--TRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEK---AGVAQDTFVLCRIFQKSG 610
            + PGFRFHPTDEEL+ YYL +KV         I   D+ KSEPW+LP+K+  K  +KEWYFF++ D+KY  G RTNRATE GYWK TGKDR +  +     +GMKKTLV++ GRAP GE++ WVMHEYRL D        +  A+D +VLC++  KSG
Sbjct:   20 MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKA--KMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL-DGKFSYHYISSSAKDEWVLCKVCLKSG 174          
The following BLAST results are available for this feature:
BLAST of FC885345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC78_ARATH5.604e-8769.44NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC74_ORYSJ4.492e-4449.07NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC68_ORYSJ3.803e-4352.10NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC76_ORYSJ1.887e-4251.95NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC31_ARATH1.036e-4049.70Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC29_ARATH1.036e-4046.20NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC2_ARATH1.766e-4050.31NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NA102_ARATH1.766e-4046.45NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC7_ARATH3.013e-4049.33NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC54_ARATH3.935e-4053.16Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA2AF02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA2AF02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC885345 ID=FC885345; Name=FC885345; organism=Citrus clementina; type=EST; length=826bp
CAAAAAAACCCAAAAAAAAAAAACCTAAACCCTAATTTTAAAAAAATTCA
GCTAAAGTTCTAATTATCTTTTTGATAACAATTTAATTAATCGAATCCTT
TATTTCTGTAATTCGCTTCGATTGATGGGCCGTGAGTTTGCATCGACGTC
GTTAGCTCCGGGGTTCCGATTTCACCCCACCGATGAGGAACTCGTTCGGT
ATTATTTGAAACGGAAGGTTTGCCATAGACCGCTCCGGTTCAACCCAATC
TGCGTCACCGATATTTACAAGTCCGAGCCTTGGGACCTACCCGATAAGTC
GAGTTTGAAAACTAGGGACAAGGAGTGGTATTTTTTTAGTATGTTGGATA
AGAAGTATGGCAATGGGTCGAGGACCAATAGGGCCACTGAAAAAGGATAC
TGGAAGACCACTGGGAAGGATCGCCCTGTTCATCATAATACGCGGACTGT
TGGGATGAAGAAGACCCTTGTCTATCACATGGGGAGGGCTCCTCATGGTG
AACGTACCAATTGGGTGATGCATGAGTACCGCCTCACTGATGACGATTTG
GAGAAAGCTGGAGTTGCGCAGGATACATTTGTTCTGTGTAGGATATTCCA
GAAGAGTGGATCAGGGCCGAAGAATGGGGAGCAGTATGGGGCACCTTTTA
TTGAGGAGGAATGGGAGGATGATGAGGCGGTTGACGCAGCTCTTGTACCA
GGTCATGACGTGGTTGCTGACGAATTGGTGGTTAGTGATGATGCATATTT
TGAAACGAATGACCTTGATCAGAATATTGATGTTGCAAATCAATCTGAAA
ATGCTCTGCGTCATTTGAACTTCTAT
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