FC885354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 6.158e-77 Identity = 140/176 (79.55%), Postives = 160/176 (90.91%), Query Frame = 1 Query: 124 VPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 651 +PA A DSTFVE+WKK+ PN++PPKTPS YM PRP TP+SIPSKLTVNFVLPY+SEL+ KEVDMVI+ A+TGQMGVLPGHV TIAELKPGV+SVH+GND KYFVS GFAFIHANS ADIIAVEAVP+D+ID +LVQKGLAEF QKL++A+TD+EKAEAQIGVDVHSALN+ALTG Sbjct: 25 LPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRPATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGVDVHSALNAALTG 200
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 6.158e-77 Identity = 138/170 (81.18%), Postives = 158/170 (92.94%), Query Frame = 1 Query: 142 VDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 651 +DSTFVE+WKKV PNM+PP+TPS +M PRP TP+SIP+KLTVNFVLPY SEL+ KEVDMVI+ ASTGQMGVLPGHVPTIAELKPG++SVH+G D KKYF+SSGFAF+HANSVADIIAVEAVP+D IDPS VQKGLAEF QKL+SATTDLEKAEAQIGV+VHSA+N+AL+G Sbjct: 34 LDSTFVEAWKKVAPNMDPPQTPSAFMKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQIGVEVHSAINAALSG 203
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 2.121e-69 Identity = 128/174 (73.56%), Postives = 153/174 (87.93%), Query Frame = 1 Query: 130 AAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 651 A PA +S+FVE+W+KV+PN++PPKTP ++ RP P++IP+KLTVNFVLPY+S+L+AKEVD VI+ A+TG+MGVLPGHV TIAELKPGVL+V +G DT KYFVSSGF FIHANSVADIIAVEAVP++Q+D LVQKGL EF QKL+SATTDLEK EAQIG+DV SALNSALTG Sbjct: 24 ATPATNSSFVEAWRKVSPNIDPPKTPLEFLKTRPPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDLEKREAQIGIDVDSALNSALTG 197
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATPD_AGABI (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.013e-19 Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 247 IPSKLTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 645 I KL ++ LP+ + S+++V V + A +G MG+L HVP+I L+PGV+ V + + ++K+FVS GFA +H N+ I VEA P++ ++ L E N+ + + ++ +K EAQI +V+ AL AL Sbjct: 28 ISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKMEAQIEAEVYEALQHAL 160
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATPD_KLULA (ATP synthase subunit delta, mitochondrial OS=Kluyveromyces lactis GN=ATP16 PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.434e-19 Identity = 53/129 (41.09%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 259 LTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 645 L + F LP+ + S V V + A +GQ+G+L HVPT+ +L PGV+ V +G+ +KK+FVS GFA + +S I +VEA P++ P V+ LAE + +SSA ++ AEA I ++V AL +AL Sbjct: 31 LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEGSSSKKFFVSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSA-DEVAAAEAAIQLEVLEALQAAL 158
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.992e-19 Identity = 48/126 (38.10%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 259 LTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 633 LT + + P+ + K+ +V + + G GV HVP IAELKPGV+ + H+ D +K+F+S GFAF++ ++ I +EAVPIDQ+D V+ GLA + Q + A + KA A IG++ + + Sbjct: 37 LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEENAKAVALIGLETYQQM 162
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATPD_ASHGO (ATP synthase subunit delta, mitochondrial OS=Ashbya gossypii GN=ATP16 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.797e-18 Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 259 LTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 645 L +NF LP+ + + V V + TGQ+G+L HVP + +L PGV+ V +G+++KK+FVS GFA + +S I +VEA P+D V+ LAE QK + A AEA I ++V AL +AL Sbjct: 30 LKLNFALPHETLFAGTAVKQVNLPVKTGQIGILANHVPIVEQLVPGVVEVLEGSESKKFFVSGGFATVQPDSTLSITSVEAFPLDSFSAENVRALLAE-AQKNAGAADSRVAAEASIQIEVLEALQAAL 157
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATPD_YEAST (ATP synthase subunit delta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP16 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.477e-18 Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 253 SKLTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 645 S L + F LP+ + S EV V + A +G++GVL HVPT+ +L PGV+ V +G+++KK+F+S GFA + +S + A+EA P++ ++ LAE + +SS+ E AEA I V+V L S L Sbjct: 30 SGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDA-REAAEAAIQVEVLENLQSVL 159
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATPD_BOVIN (ATP synthase subunit delta, mitochondrial OS=Bos taurus GN=ATP5D PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16 Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 232 QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 645 Q P + P +++ F P ++ V V V TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++A+S ++A EAV +D +D + L + +L A + +AE QI ++ + AL AL Sbjct: 29 QAPAAGPGQMSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRIEANEALVKAL 167
BLAST of FC885354 vs. ExPASy Swiss-Prot
Match: ATPD_MOUSE (ATP synthase subunit delta, mitochondrial OS=Mus musculus GN=Atp5d PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16 Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 238 PTSIPSKLTVNFVLPYASELSAKEVDMVIVLASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 645 P + P +++ F P + V V V TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++A+S ++A EAV +D +D + L + +LS A + +AE QI ++ + AL AL Sbjct: 31 PAAGPGQMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEALVKAL 167 The following BLAST results are available for this feature:
BLAST of FC885354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC885354 ID=FC885354; Name=FC885354; organism=Citrus clementina; type=EST; length=919bpback to top |