FC888369

Overview
NameFC888369
Unique NameFC888369
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.386e-98
Identity = 180/253 (71.15%), Postives = 202/253 (79.84%), Query Frame = 2
Query:   62 MPAVGGFDK--GNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGRHEEAREELRKVRGVNDV 814
            MPAVGG     GN K YPGNLT YV VTC+VAAMGGLIFGYDIGISGGVTSM SFLKKFFPSVYRK++A+ES+N YC+YDS+TLTMFT                +TR+FGRKLSM                   +WMLI+GR+LLGFGIGFANQSVPLYLSEMAPY++RGALNIGFQLSIT+GIL+ANVLNYFF KI GGWGWRLSLGGAMVPALIITVGS++LPDTPNS+IERG+HEEAR  L++VRGV DV
Sbjct:    1 MPAVGGIPPSGGNRKVYPGNLTLYVTVTCVVAAMGGLIFGYDIGISGGVTSMDSFLKKFFPSVYRKKKADESSNQYCQYDSQTLTMFTSSLYLAALIASLVASTITRKFGRKLSMLFGGVLFCAGAIINGAAKAVWMLILGRILLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLNYFFAKIKGGWGWRLSLGGAMVPALIITVGSLVLPDTPNSMIERGQHEEARAHLKRVRGVEDV 253          
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 352.829 bits (904), Expect = 1.297e-96
Identity = 176/252 (69.84%), Postives = 202/252 (80.16%), Query Frame = 2
Query:   62 MPAVGGFDKGNG-KEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGRHEEAREELRKVRGVNDV 814
            MPA GGF  G+G K YPG LTP+VL TC+VAAMGGLIFGYDIGISGGVTSMPSFLK+FFPSVYRKQQ + STN YC+YDS TLTMFT                VTR+FGR+LSM                   +WMLIVGR+LLGFGIGFANQ+VPLYLSEMAPY++RGALNIGFQLSIT+GIL+A VLNYFF KI GGWGWRLSLGGA+VPALIIT+GS++LPDTPNS+IERG+HEEA+ +LR++RGV+DV
Sbjct:    1 MPA-GGFVVGDGQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQEDASTNQYCQYDSPTLTMFTSSLYLAALISSLVASTVTRKFGRRLSMLFGGILFCAGALINGFAKHVWMLIVGRILLGFGIGFANQAVPLYLSEMAPYKYRGALNIGFQLSITIGILVAEVLNYFFAKIKGGWGWRLSLGGAVVPALIITIGSLVLPDTPNSMIERGQHEEAKTKLRRIRGVDDV 251          
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.217e-86
Identity = 163/251 (64.94%), Postives = 189/251 (75.30%), Query Frame = 2
Query:   62 MPAVGGFDKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGRHEEAREELRKVRGVNDV 814
            MP+VG       KEYPG LT YV VTCIVAAMGGLIFGYDIGISGGVT+M SF +KFFPSVY KQ+ +  +N YC++DS +LT+FT                VTRQFGRK+SM                   +WMLIVGRLLLGFGIGF NQSVPLYLSEMAPY++RGALNIGFQLSIT+GIL+ANVLN+FF+KI   WGWRLSLGGA+VPALIITVGS+ILPDTPNS+IERG+   A  +LRK+RGV+D+
Sbjct:    1 MPSVGIVIGDGKKEYPGKLTLYVTVTCIVAAMGGLIFGYDIGISGGVTTMDSFQQKFFPSVYEKQKKDHDSNQYCRFDSVSLTLFTSSLYLAALCSSLVASYVTRQFGRKISMLLGGVLFCAGALLNGFATAVWMLIVGRLLLGFGIGFTNQSVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLNFFFSKI--SWGWRLSLGGAVVPALIITVGSLILPDTPNSMIERGQFRLAEAKLRKIRGVDDI 249          
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.934e-69
Identity = 134/245 (54.69%), Postives = 165/245 (67.35%), Query Frame = 2
Query:   83 DKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNL-YCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGRHEEAREELRKVRGVNDV 814
            + G+G +Y G +T +V++TCIVAAMGGL+FGYDIGISGGV SM  FL KFFP V R+ Q        YCKYD+E LT+FT                +TR FGRK+SM                   + MLI+GRL LG G+GFANQSVPLYLSEMAP + RGALNIGFQL+IT+GIL AN++NY   K+  G GWRLSLG A VPA+++ VG   LPDTPNSI+ERG  E+A+E L+K+RG  +V
Sbjct:    9 ESGHGGDYEGRVTAFVMITCIVAAMGGLLFGYDIGISGGVISMEDFLTKFFPDVLRQMQNKRGRETEYCKYDNELLTLFTSSLYLAALFASFLASTITRLFGRKVSMVIGSLAFLSGALLNGLAINLEMLIIGRLFLGVGVGFANQSVPLYLSEMAPAKIRGALNIGFQLAITIGILAANIVNYVTPKLQNGIGWRLSLGLAGVPAVMMLVGCFFLPDTPNSILERGNKEKAKEMLQKIRGTMEV 253          
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.819e-67
Identity = 127/242 (52.48%), Postives = 168/242 (69.42%), Query Frame = 2
Query:   89 GNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGRHEEAREELRKVRGVNDV 814
            G G  Y G +T +V++TCIVAAMGGL+FGYD+GISGGVTSM  FL KFFP V ++         YCK+D++ L +FT                VTR++GRK+SM                   + MLIVGRLLLG G+GFANQS P+YLSEMAP + RGALNIGFQ++IT+GILIAN++NY  +++    GWR+SLG A VPA+I+ +GS +LPDTPNS++ERG++E+ARE L+K+RG ++V
Sbjct:   12 GGGNSYEGGVTVFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLSKFFPEVDKQMHEARRETAYCKFDNQLLQLFTSSLYLAALASSFVASAVTRKYGRKISMFVGGVAFLIGSLFNAFATNVAMLIVGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILIANLINYGTSQMAKN-GWRVSLGLAAVPAVIMVIGSFVLPDTPNSMLERGKYEQAREMLQKIRGADNV 252          
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.827e-66
Identity = 124/242 (51.24%), Postives = 169/242 (69.83%), Query Frame = 2
Query:   89 GNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGRHEEAREELRKVRGVNDV 814
            G G+ Y G +T +V++TCIVAAMGGL+FGYD+GISGGVTSM  FL KFFP V  + +  +    YCK+D++ L +FT                +TR+ GRK+SM                   + MLI+GRLLLG G+GFANQS P+YLSEMAP + RGALNIGFQ++IT+GIL+AN++NY  +K+    GWR+SLG A VPA+++ +GS ILPDTPNS++ERG++EEA++ L+K+RG ++V
Sbjct:   12 GGGRSYEGGVTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTKFFPQVESQMKKAKHDTAYCKFDNQMLQLFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKM-AQHGWRVSLGLAAVPAVVMVIGSFILPDTPNSMLERGKNEEAKQMLKKIRGADNV 252          
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 2.387e-66
Identity = 126/249 (50.60%), Postives = 170/249 (68.27%), Query Frame = 2
Query:   74 GGF-DKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQAN-ESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGRHEEAREELRKVRGVNDV 814
            GGF    NG E+   +TP V+++CI+AA GGL+FGYD+G+SGGVTSMP FL+KFFP VYRK  A  +  + YCKYD++ L +FT                 TR  GR+L+M                   + MLI GR+LLG G+GFANQ+VPL+LSE+AP R RG LNI FQL++T+GIL AN++NY   KI GGWGWRLSLG A +PAL++TVG++++ +TPNS++ERGR +E +  LR++RG ++V
Sbjct:    4 GGFATSANGVEFEAKITPIVIISCIMAATGGLMFGYDVGVSGGVTSMPDFLEKFFPVVYRKVVAGADKDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRTLGRRLTMLIAGVFFIIGVALNAGAQDLAMLIAGRILLGCGVGFANQAVPLFLSEIAPTRIRGGLNILFQLNVTIGILFANLVNYGTAKIKGGWGWRLSLGLAGIPALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIRGTDNV 252          
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.117e-66
Identity = 128/241 (53.11%), Postives = 164/241 (68.05%), Query Frame = 2
Query:   95 GKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGR-HEEAREELRKVRGVNDV 814
            G +Y G +T +V ++C++AAMGG+IFGYDIG+SGGVTSM  FLKKFFP VYRK + +   + YCK+DS+ LT FT                VTR FGRK S+    X    X         ++MLI GR+LLG G+GFANQ+VPLYLSEMAP R+RGA+N GFQ S+ +G L AN++NY   KI GGWGWR+SL  A VPA I+T G++ LP+TPNS+I+R   HE A+  L++VRG  DV
Sbjct:   11 GGQYNGRMTSFVALSCMMAAMGGVIFGYDIGVSGGVTSMDPFLKKFFPDVYRKMKEDTEISNYCKFDSQLLTSFTSSLYVAGLVASFFASSVTRAFGRKPSILLGGXVFLAXAALGGAAVNVYMLIFGRVLLGVGVGFANQAVPLYLSEMAPPRYRGAINNGFQFSVGIGALSANLINYGTEKIEGGWGWRISLAMAAVPAAILTFGALFLPETPNSLIQRSNDHERAKLMLQRVRGTTDV 251          
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.710e-64
Identity = 124/239 (51.88%), Postives = 161/239 (67.36%), Query Frame = 2
Query:   98 KEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGRHEEAREELRKVRGVNDV 814
            + Y   LTP V VTC + A GGLIFGYD+GISGGVTSM  FL++FFP VY+K ++    N YC++DS+ LT+FT                +TR FGRK SM                   I ML++GR+LLGFG+GFANQSVP+YLSEMAP   RGA N GFQ++I  GI++A ++NYF  ++ G  GWR+SLG A VPA++I +G++ILPDTPNS+IERG  EEA+E L+ +RG N+V
Sbjct:   13 RNYNYKLTPKVFVTCFIGAFGGLIFGYDLGISGGVTSMEPFLEEFFPYVYKKMKSAHE-NEYCRFDSQLLTLFTSSLYVAALVSSLFASTITRVFGRKWSMFLGGFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQSVPVYLSEMAPPNLRGAFNNGFQVAIIFGIVVATIINYFTAQMKGNIGWRISLGLACVPAVMIMIGALILPDTPNSLIERGYTEEAKEMLQSIRGTNEV 250          
BLAST of FC888369 vs. ExPASy Swiss-Prot
Match: STP8_ARATH (Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 5.502e-63
Identity = 123/243 (50.62%), Postives = 165/243 (67.90%), Query Frame = 2
Query:   89 GNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVLNYFFNKIHGGWGWRLSLGGAMVPALIITVGSMILPDTPNSIIERGRHEEAREELRKVRGVNDV 814
            GN K +   +T YV +  I+AA+GGLIFGYDIGISGGVT+M  FLK+FFPSVY RK+ A+E  N YCKYD++ L +FT                   + GR+ +M                   I+MLI+GR+LLGFG+GF NQ+VPL+LSE+AP R RG LNI FQL +T+GILIAN++NYF + IH  +GWR++LGGA +PALI+  GS+++ +TP S+IER + +E +E L+K+RGV DV
Sbjct:    9 GNSKSFDAKMTVYVFICVIIAAVGGLIFGYDIGISGGVTAMDDFLKEFFPSVYERKKHAHE--NNYCKYDNQFLQLFTSSLYLAALVASFFASATCSKLGRRPTMQLASIFFLIGVGLAAGAVNIYMLIIGRILLGFGVGFGNQAVPLFLSEIAPARLRGGLNIVFQLMVTIGILIANIVNYFTSSIH-PYGWRIALGGAGIPALILLFGSLLICETPTSLIERNKTKEGKETLKKIRGVEDV 248          
The following BLAST results are available for this feature:
BLAST of FC888369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
STC_RICCO1.386e-9871.15Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
STP1_ARATH1.297e-9669.84Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
STP12_ARATH1.217e-8664.94Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
STP11_ARATH3.934e-6954.69Sugar transport protein 11 OS=Arabidopsis thaliana... [more]
STP9_ARATH2.819e-6752.48Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
STP10_ARATH1.827e-6651.24Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
STP13_ARATH2.387e-6650.60Sugar transport protein 13 OS=Arabidopsis thaliana... [more]
HEX6_RICCO3.117e-6653.11Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
STP4_ARATH1.710e-6451.88Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
STP8_ARATH5.502e-6350.62Sugar transport protein 8 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA21CG08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA21CG08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC888369 ID=FC888369; Name=FC888369; organism=Citrus clementina; type=EST; length=815bp
CTCCGTGTCATCGTTTCTTTATCTTCTTAGAATCAAGAAAAAAAAGGAAA
AGGCTGAAAAAATGCCTGCTGTTGGAGGATTTGATAAGGGTAACGGGAAA
GAGTACCCCGGAAACCTCACCCCATACGTGTTAGTAACATGTATTGTTGC
TGCCATGGGTGGCCTCATCTTTGGTTATGATATTGGGATTTCAGGTGGTG
TGACCTCAATGCCTTCATTTTTGAAGAAGTTTTTCCCGTCGGTGTACAGG
AAGCAACAGGCGAACGAGTCAACGAATCTGTACTGTAAGTATGACAGTGA
GACGTTGACTATGTTCACGTCGTCGCTTTACTTGGCTGCTCTATTATCAT
CACTGGTGGCGTCAAGGGTGACGAGACAATTCGGAAGAAAACTGTCTATG
TTTTTCGGCGGTATCCTGTTTCTTGCCGGTGCCTTGCTCAATGGCTTCGC
CCAAGCCATTTGGATGCTTATTGTTGGCCGACTTTTGCTCGGTTTCGGCA
TCGGTTTCGCTAACCAGTCCGTGCCACTCTACCTCTCTGAGATGGCTCCA
TACAGATTCAGAGGTGCTTTGAACATTGGGTTTCAGTTATCAATCACAGT
TGGAATTCTTATAGCAAATGTGTTGAACTACTTCTTTAATAAGATTCATG
GTGGCTGGGGATGGCGTTTGAGCTTAGGTGGTGCCATGGTCCCTGCTCTT
ATCATCACCGTCGGTTCAATGATCCTTCCGGACACACCAAATTCTATAAT
TGAACGTGGTCGGCACGAAGAAGCCAGGGAGGAACTTAGAAAAGTTCGCG
GTGTTAATGATGTTG
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