FC888655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC888655 vs. ExPASy Swiss-Prot
Match: STLP2_ARATH (SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4) HSP 1 Score: 199.904 bits (507), Expect = 1.316e-50 Identity = 111/240 (46.25%), Postives = 151/240 (62.92%), Query Frame = 2 Query: 50 GVPLYGAGWVPYDQVIRSTHXXXXXXXXXXXXXXXHGSKDEAVADKSDDIRRNYYVVLXXXXXXXNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGP-GRVWDLASSAVATPLAKENDETF 766 GVP+Y A W+P + +RS S+D+ + S R+ +VL SGI N +L+ D +NSLS+QP+ L SDLPYRMA+HP G+ICAL NSC+LF W+++ + E + G SE+V+ +L +VGQQLAL F+ EG++ AAG+E+G LRVFKWPS+ +LNES+AH+SVK L+FS G+FLVSLG GP RVWD+ +SA L+KE DE F Sbjct: 18 GVPIYAADWIP-EVDVRSK-----------IIMDPEKSEDDDESSSSSSSSRSC-IVLSGGGGEGRSGISNVILICRVDLNTNSLSEQPLGRLVVGSDLPYRMAVHPREGGLICALPNSCKLFHWEDIMSREDNQAGE--SEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLVSLG--GPVCRVWDVNASAAVASLSKEKDEMF 240
BLAST of FC888655 vs. ExPASy Swiss-Prot
Match: PHF1_ARATH (SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.391e-20 Identity = 58/188 (30.85%), Postives = 94/188 (50.00%), Query Frame = 2 Query: 212 YVVLXXXXXXXNSGIRNAVLLSHFDF--ASNSLSDQPVAE--LRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDE 760 +V++ S + + LL+ F F + SLS P+A L+ P +++HP GD +C+ + C+LFE G+ I K L L+N G Q + F +G+ A G +G LR+ +WP+L +IL+E +AH S++D+ FS D +FL + G R+W + L + DE Sbjct: 27 WVLIAKASKRRGSSVSSPALLNIFSFDPITASLSSSPLATHTLKDSDGDPVAVSVHPGGDYFVCSTSKGGCKLFELVGGAT------GITILAKELLPLQNAGLQKCMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGSARIWKAEDGFPLSTLERSGDE 208 The following BLAST results are available for this feature:
BLAST of FC888655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC888655 ID=FC888655; Name=FC888655; organism=Citrus clementina; type=EST; length=786bpback to top |