FC896012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.503e-19 Identity = 52/146 (35.62%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 260 RRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV-SSSQKKEAEELGVSCFSWEEFLQLG 694 R ++DGK G Y W++Y++ A GSA+ G+N GDR GI+ N PEW+++ A + ++ V LY TLGANA+E+++NH+E+S+ + + ILS +P +KTIVS+ + ++ K + V + +F +LG Sbjct: 74 RELLADGKRGDYKWISYKQACIRANNIGSALVQLGLNKGDRIGIFSINRPEWVLSDMAAMNHSLVPVALYATLGANAIEYVVNHSEISVLLCEGKNVEKILS-MPGTT--IKTIVSYDPLPQATLDKFKDNENVKLYLLSDFEKLG 216
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.051e-17 Identity = 58/175 (33.14%), Postives = 92/175 (52.57%), Query Frame = 2 Query: 242 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRG--VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 N LG RK PY WL+Y++V D + GSA+ +G +P GI+ N PEW+I +AC + ++ VPLYDTLGA+A+ +I+N AE+S+ F + + IL S + LK IV + S ++ ++ GV S + LG + P P + +++ I + Sbjct: 105 NGPCLGSRKPDQ----PYEWLSYKQVEDLSECIGSALLQKGFQASPDQFIGIFAQNRPEWVIIEQACFAYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKARILLESVENKLTPGLKIIVVMDSYGSELVEQGKKCGVEVISLKAMEGLGRANRRKPKPPEPDDLAVICF 275
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.518e-16 Identity = 56/178 (31.46%), Postives = 91/178 (51.12%), Query Frame = 2 Query: 242 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-----SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 N LG RK + PY W++Y+EV + A GS + +G P G++ N PEW+I + C S ++ VPLYDTLGA+A+ +I+N AE+S+ F + + +L + L C LK IV + S + ++ GV S + LG ++ P P + +++ I + Sbjct: 106 NGPCLGSRKPNQ----PYEWISYKEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPC---LKIIVIMDSYGSDLVERGKKCGVEIISLKALEDLGRVNRVKPKPPEPEDLAIICF 276
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: FCSB_DICDI (Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.590e-16 Identity = 51/181 (28.18%), Postives = 88/181 (48.62%), Query Frame = 2 Query: 224 SAKRIPNNQMLG-RRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT----LDCELPPKKKTNISTIMY 751 S K+ + G R+K S+G +G + W++Y + + G+ P + GI+ N EW+I A Q+ V Y+TLG ++ ++ HAE+ +AF + L + + LKTI+ F ++ A+ELGV+ ++++E ++ G PP T +STIMY Sbjct: 72 SCKKYGERKCFGERKKDSNGNLGKFEWISYNTYLERCEYIQQGLCELGLKPKSKVGIFSKNRLEWLIVHSASFIQSYCVVSFYETLGVESLSYVTEHAEIGLAFCSAETLQKTLD-IAKGVKVLKTIICFDSIDKEHYNIAKELGVTLYTYDEIMKKGKEANGKHKHTPPTPDT-LSTIMY 250
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.842e-16 Identity = 53/175 (30.29%), Postives = 86/175 (49.14%), Query Frame = 2 Query: 242 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 N LG RK + PY W++Y++V D A GS + +G P GI+ N PEW+I+ AC + ++ VPLYDTLGA A+ ++IN A++S+ + ++L + LKT++ K E+ G+ S + LG + + P P ++S I + Sbjct: 90 NGPCLGYRKPNQ----PYKWISYKQVSDRAEYLGSCLLHKGYKPSQDQFIGIFAQNRPEWVISELACYTYSMVAVPLYDTLGAEAIIYVINRADISVVICDTPQKATMLIENVEKDLTPGLKTVILMDPFDDDLMKRGEKCGIEMLSLHDAENLGKENFKKPMPPNPEDLSVICF 260
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.332e-15 Identity = 54/175 (30.86%), Postives = 84/175 (48.00%), Query Frame = 2 Query: 242 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN--PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 N LG RK PY WL+Y++V + + GSA+ +G P GI+ N PEW+I + C + ++ VPLYDTLG A+ +I+N AE+S+ FV + + +L + LK IV S + + GV S + LG + P P +++ I + Sbjct: 105 NGPCLGSRKPDQ----PYEWLSYKQVAELSECIGSALIQKGFKTAPDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEKAKLLLEGVENKLIPGLKIIVVMDAYGSELVERGQRCGVEVTSMKAMEDLGRANRRKPKPPAPEDLAVICF 275
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL5_MOUSE (Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.088e-14 Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 2 Query: 242 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 N LG RK + PY W++Y++V D A GS + +G GI+ N PEW+I+ AC + ++ VPLYDTLG A+ F+IN A++ + + ++L + LKTI+ K E+ GV S + +G + + P P K ++S I + Sbjct: 90 NGPCLGYRKPNQ----PYKWISYKQVSDRAEYLGSCLLHKGYKSSQDQFVGIFAQNRPEWVISELACYTYSMVAVPLYDTLGTEAIIFVINRADIPVVICDTPQKATMLVENVEKGLTPGLKTIILMDPFDDDLMKRGEKCGVEMLSLHDAENIGKENFKKPVPPKPEDLSVICF 260
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.424e-14 Identity = 51/174 (29.31%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 254 LGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-----SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 LG RK + PY W++Y++V + A GSA+ +G P GI+ N PEW+ + C + ++ VPLYDTLG +A+ +I+N AE+S+ F + + +L + L C LK IV + + + ++ GV + LG ++ P P + +++ I + Sbjct: 110 LGSRKPNQ----PYEWISYKQVAEMAECIGSALIQKGFKPCSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPC---LKIIVIMDSYDNDLVERGQKCGVEIIGLKALEDLGRVNRTKPKPPEPEDLAIICF 276
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: LCF2_SCHPO (Long-chain-fatty-acid--CoA ligase 2 OS=Schizosaccharomyces pombe GN=SPBP4H10.11c PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 59/260 (22.69%), Postives = 112/260 (43.08%), Query Frame = 2 Query: 71 MSETYTVKVEEARPAADGKPSAGPVYRCIYAKDGLLESPV-GLESPWQFFCDSAKRIPNNQMLGRRKV-------------------------SDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL------GVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 + + Y V+ ++++ +P +YR I++ LL++P G+ + + C +AK Q +G RK+ + ++GPY ++++ +VY+ A+ GS + + G+ + + +W + C+SQAI V Y+TLG + + ++ + F N IP +L L + T V SS+ ++ EL V +++ L LG + P P K +I MY Sbjct: 3 IKDYYCVETKDSK-----QPGESYIYRSIHSAGKLLDTPEDGVSTVYDLLCTAAKNHGEKQAMGSRKLIKENREEREIIRKVDNEEVVEKKLWTTYELGPYEYISFNKVYEIALALGSGLVASGITSETTMLFFAATSAKWFTTAQGCSSQAIPIVTAYETLGEDGIYTSLDECKSRAIFTDPNLIPKLLGPLKQ-----STWVKLIVCSSTPSEDLVELVKSTAPDVEIITYDNLLSLGKEKPQPPHPPKADDICCYMY 252
BLAST of FC896012 vs. ExPASy Swiss-Prot
Match: ACSL5_HUMAN (Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapiens GN=ACSL5 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 54/175 (30.86%), Postives = 82/175 (46.86%), Query Frame = 2 Query: 242 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGV--NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVS--IAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMY 751 N LG RK + PY WL+Y++V D A GS + +G +P GI+ N PEWII+ AC + ++ VPLYDTLG A+ I+N A+++ I + + I + LK I+ K+ E+ G+ S + LG P P ++S I + Sbjct: 90 NGPCLGYRKPNQ----PYRWLSYKQVSDRAEYLGSCLLHKGYKSSPDQFVGIFAQNRPEWIISELACYTYSMVAVPLYDTLGPEAIVHIVNKADIAMVICDTPQKALVLIGNVEKGFTPSLKVIILMDPFDDDLKQRGEKSGIEILSLYDAENLGKEHFRKPVPPSPEDLSVICF 260 The following BLAST results are available for this feature:
BLAST of FC896012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC896012 ID=FC896012; Name=FC896012; organism=Citrus clementina; type=EST; length=751bpback to top |