FC897286

Overview
NameFC897286
Unique NameFC897286
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length930
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERLN2_RAT (Erlin-2 OS=Rattus norvegicus GN=Erlin2 PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 9.033e-76
Identity = 137/232 (59.05%), Postives = 181/232 (78.02%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I   QK+MEK++ +K  EI++  +LAR++
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREK 255
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERLN2_PONAB (Erlin-2 OS=Pongo abelii GN=ERLIN2 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 9.033e-76
Identity = 137/232 (59.05%), Postives = 181/232 (78.02%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I   QK+MEK++ +K  EI++  +LAR++
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREK 255
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERLN2_MOUSE (Erlin-2 OS=Mus musculus GN=Erlin2 PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 9.033e-76
Identity = 137/232 (59.05%), Postives = 181/232 (78.02%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I   QK+MEK++ +K  EI++  +LAR++
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREK 255
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERLN2_HUMAN (Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 9.033e-76
Identity = 137/232 (59.05%), Postives = 181/232 (78.02%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I   QK+MEK++ +K  EI++  +LAR++
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREK 255
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERLN2_BOVIN (Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.541e-75
Identity = 136/232 (58.62%), Postives = 181/232 (78.02%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I   QK+MEK++ ++  EI++  +LAR++
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITFGQKVMEKETEKRISEIEDAAFLAREK 255
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERL2B_XENLA (Erlin-2-B OS=Xenopus laevis GN=erlin2-B PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.483e-75
Identity = 139/232 (59.91%), Postives = 180/232 (77.59%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGHVGVY+RGGALL T + PGFHL LP IT ++ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D    APGI I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K AI EAEK A V++I   QK+MEK++ +K  EI++  +LAR++
Sbjct:   24 HKIEEGHVGVYYRGGALLTTTSGPGFHLMLPFITSFKSVQSTLQTDEVKNVPCGTSGGVMIYFDRIEVVNYLISSAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHNLQEVYIELFDQIDEDLKLALQKDLNLMAPGIIIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKAIIEAEKVAQVAQIKYGQKVMEKETEKKISEIEDFAFLAREK 255
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERLN2_XENTR (Erlin-2 OS=Xenopus tropicalis GN=erlin2 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.855e-75
Identity = 136/232 (58.62%), Postives = 181/232 (78.02%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGHVGVY+RGGALL + + PGFHL LP IT ++ VQ T+QTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDKT I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K AI EAEK A V++I   QK+MEK++ +K  EI++  ++AR++
Sbjct:   24 HKIEEGHVGVYYRGGALLTSTSGPGFHLMLPFITSFKSVQSTMQTDEVKNVPCGTSGGVMIYFDRIEVVNYLIPSAVYDIVKNYTADYDKTLIFNKIHHELNQFCSVHNLQEVYIELFDQIDENLKLALQKDLNSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKAIIEAEKVAQVAEIKYGQKVMEKETEKKISEIEDSAFVAREK 255
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERLN1_MOUSE (Erlin-1 OS=Mus musculus GN=Erlin1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.704e-74
Identity = 133/232 (57.33%), Postives = 180/232 (77.59%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGH+ VY+RGGALL + + PG+H+ LP IT +  VQ TLQTD+V ++PCGT GGVMI  ++IEVVN L    V++ +R+Y   YDKT I++KIHHE+NQFCS+H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V+KI  +QK+MEK++ ++  EI++  +LAR++
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNTMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKRAVIEAEKIAQVAKIRFQQKVMEKETEKRISEIEDAAFLAREK 255
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERLN1_PONAB (Erlin-1 OS=Pongo abelii GN=ERLIN1 PE=2 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 2.225e-74
Identity = 133/232 (57.33%), Postives = 180/232 (77.59%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGH+ VY+RGGALL + + PG+H+ LP IT +  VQ TLQTD+V ++PCGT GGVMI  ++IEVVN L    V++ +R+Y   YDKT I++KIHHE+NQFCS+H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V+KI  +QK+MEK++ ++  EI++  +LAR++
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEKETEKRISEIEDAAFLAREK 255
[Close]
BLAST of FC897286 vs. ExPASy Swiss-Prot
Match: ERLN1_HUMAN (Erlin-1 OS=Homo sapiens GN=ERLIN1 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.225e-74
Identity = 133/232 (57.33%), Postives = 180/232 (77.59%), Query Frame = 2 
Query:  230 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKQEEIDNQMYLARQR 925
            H+I EGH+ VY+RGGALL + + PG+H+ LP IT +  VQ TLQTD+V ++PCGT GGVMI  ++IEVVN L    V++ +R+Y   YDKT I++KIHHE+NQFCS+H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V+KI  +QK+MEK++ ++  EI++  +LAR++
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEKETEKRISEIEDAAFLAREK 255
The following BLAST results are available for this feature:
BLAST of FC897286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERLN2_RAT9.033e-7659.05Erlin-2 OS=Rattus norvegicus GN=Erlin2 PE=1 SV=1[more]
ERLN2_PONAB9.033e-7659.05Erlin-2 OS=Pongo abelii GN=ERLIN2 PE=2 SV=1[more]
ERLN2_MOUSE9.033e-7659.05Erlin-2 OS=Mus musculus GN=Erlin2 PE=1 SV=1[more]
ERLN2_HUMAN9.033e-7659.05Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1[more]
ERLN2_BOVIN1.541e-7558.62Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1[more]
ERL2B_XENLA4.483e-7559.91Erlin-2-B OS=Xenopus laevis GN=erlin2-B PE=2 SV=1[more]
ERLN2_XENTR5.855e-7558.62Erlin-2 OS=Xenopus tropicalis GN=erlin2 PE=2 SV=1[more]
ERLN1_MOUSE1.704e-7457.33Erlin-1 OS=Mus musculus GN=Erlin1 PE=2 SV=1[more]
ERLN1_PONAB2.225e-7457.33Erlin-1 OS=Pongo abelii GN=ERLIN1 PE=2 SV=2[more]
ERLN1_HUMAN2.225e-7457.33Erlin-1 OS=Homo sapiens GN=ERLIN1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA52CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA52CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC897286 ID=FC897286; Name=FC897286; organism=Citrus clementina; type=EST; length=930bp
TCTTTACTAAGTAACCAGCAAATTCTCTCGCGCACATTTTGGCAACAGTT
GAAACCCCGCCATGGATCCACAGCAACAAGGAGTAGGCGCTACACAGGCA
CAGCCTCGGCCTCAGCCTCAGCCTGGCGATTCGTCTGCTATACTCGCCGT
GTTCCTCACTTTCATCGCTATTGTCTCACTGATATTGATCCCATCATCGT
CATCCATCAAAAGTAGCCTGGCCATTTTGCACCAAATTCCAGAAGGCCAC
GTTGGAGTATATTGGAGAGGAGGTGCCCTTCTAGAGACAATTACACACCC
AGGCTTCCATCTGAAGTTGCCTTTGATAACACACTACGAGCCTGTTCAAG
TGACCCTTCAGACAGATCAGGTTACTGACATTCCATGTGGGACCAAAGGG
GGTGTAATGATCAACTTTGAGAAGATAGAGGTTGTTAACCGGCTTCGTAA
GGAATATGTGTACGAGACTCTGCGCGACTATGGCGTGCAATATGACAAGA
CATGGATATATGACAAGATTCATCATGAGATCAATCAGTTCTGTAGTTCT
CATAGTCTGCAACAAGTCTATATTGATGTGTTTGATCAGATTGACGAAAA
GATGAAGGATGCTCTTCAGGTTGACTGCACGCGTTATGCTCCAGGCATTG
AAATTATCAGTGTGCGTGTTACAAAGCCTACTATTCCAGATAGAATCAGA
AGAAATTTTGAACAAATGGAAGAGGAACGTACTAGGGTGTTAATTGCTAT
TGAGAAACAGAAAGTAGCTGAGAAAGAGGCAGAGACAAGCAAAAAGATGG
CTATCAGTGAAGCTGAGAAGAATGCCAATGTTAGCAAGATCCTTATGGAA
CAGAAGTTGATGGAGAAGGACAGTGCTCGAAAGCAGGAGGAAATTGACAA
TCAAATGTACTTGGCTCGTCAAAGGGGCCT
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