FC899031
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_SYNY3 (Riboflavin biosynthesis protein ribD OS=Synechocystis sp. (strain PCC 6803) GN=ribD PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.850e-36 Identity = 73/183 (39.89%), Postives = 109/183 (59.56%), Query Frame = 2 Query: 311 AGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTARHGGGHTPMRIVLTQTLNLPEEANLWDVSDASIIVVTQRGARRKFQKYLASRGVEVV 859 AGI +VVVG+ +P + G+ + LR G++V V E+ ++C +N R + PF +FKYAMTLDGKIA + H++W++S ++R V LR + AV++GGNTVRRDNP LT G P+R+VL+++L+LP EA LWD A +V+T++ R +L VE + Sbjct: 92 AGIAKVVVGMVDPNPLVAGKGISRLRQAGIEVKVGVEE----------EACQRLNEAFCFRIKHQRPFGIFKYAMTLDGKIATAQAHSSWVTSSSARHWVHQLRSQCQAVIIGGNTVRRDNPLLTNHGVGEVNPLRVVLSRSLDLPIEAQLWDQDVAKTLVITEKTCDRNTLSHLEKLEVETL 264 HSP 2 Score: 37.3502 bits (85), Expect = 1.850e-36 Identity = 20/62 (32.26%), Postives = 33/62 (53.23%), Query Frame = 3 Query: 90 GFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHG 275 G T+P+P G +I ++ G+G+ G E+ A+ G +GAT Y+N+EP + G Sbjct: 20 GKTAPNPLVGSVIVQGD-EIVGQGFHPQAGQPHGEIFALWEAGDRAKGATLYVNLEPCNHQG 80
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_AQUAE (Riboflavin biosynthesis protein ribD OS=Aquifex aeolicus GN=ribD PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.348e-26 Identity = 67/184 (36.41%), Postives = 99/184 (53.80%), Query Frame = 2 Query: 311 AGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTARH-GGGHTPMRIVLTQTLNLPEEANLWDVSDASIIVVTQRGARRKFQKYLASRGVEVV 859 +GI RVVV +P + G+ V LR+ G++V V EEAR+ +N T P+ K+A TLDGK+A +G + WI+SK SR LR + AV+VG NTV +D+P LT R P+RI+L L +P A + + +A IV+T++ K +K L +GV+V+ Sbjct: 94 SGIKRVVVATLDPNPLMSGKGVEKLRNAGIEVDV------GVCEEEARE----LNEDFFTYITQERPYITLKWAQTLDGKLATLTGSSKWITSKESRKVAHILRREATAVLVGVNTVIKDDPHLTVRFVPTEKQPVRIILDPELEVPLSAKVLNTEEAPTIVITKK-ENEKAEK-LKEKGVQVL 265 HSP 2 Score: 46.2098 bits (108), Expect = 1.348e-26 Identity = 23/60 (38.33%), Postives = 32/60 (53.33%), Query Frame = 3 Query: 81 KSAGFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEP 260 K G+T P+P G ++ GK+ G GY G AEV A+ G +GAT Y+ +EP Sbjct: 19 KRKGYTHPNPTVGAVVVKE-GKIVGLGYHEKAGKPHAEVMALGQAGEKAKGATLYVTLEP 77
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_CHLMU (Riboflavin biosynthesis protein ribD OS=Chlamydia muridarum GN=ribD PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 4.163e-21 Identity = 57/185 (30.81%), Postives = 97/185 (52.43%), Query Frame = 2 Query: 317 ITRVVVGIRNPLQHLRGQAVRALRSQGLQVHV-LGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTARHGGG----HTPMRIVLTQTLNLPEEANLWDVSDASIIVVTQRGARRKFQKYLASRGVEV 856 ++ V + + +P + + V L+ G+ V+V +G EEA+ S P +H+ + +P+ V K A +LDG+ + G + WIS + +R V LR S AV+VG TV DNPRL+AR G P+R+V+ ++P +A +W+ ++++ T ++ + L RGVEV Sbjct: 98 VSSVYIALLDPDPRVCKRGVARLKEAGISVYVGIGH-------EEAKASL----QPYLHQRETGLPWVVMKTAASLDGQTSDRRGISQWISGEQARLDVGRLRAESQAVIVGSRTVCLDNPRLSARMPSGDLYERQPLRVVVDSRGSVPLDARVWNPDSGNVLLATTEQCSKEHIQKLEDRGVEV 271 HSP 2 Score: 35.4242 bits (80), Expect = 4.163e-21 Identity = 25/75 (33.33%), Postives = 38/75 (50.67%), Query Frame = 3 Query: 93 FTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHGDHT--AVSALVQTR 311 F P+P GC+I + G + G G+ G+ AEV A + S GA Y+ +EP CH T V L++++ Sbjct: 25 FAPPNPWVGCVIVKN-GCIIGRGWHKGIGSPHAEVCAFQDQTSSLVGADVYVTLEP-CCHFGRTPPCVDLLIKSK 97
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_BUCBP (Riboflavin biosynthesis protein ribD OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ribD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.550e-20 Identity = 42/139 (30.22%), Postives = 68/139 (48.92%), Query Frame = 2 Query: 278 PHCCFCSCSD*AGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTARH 694 P CC GI+RVV+ +P + G V+ L+ G+ V I K + +N R T+ +P+ K A ++DG+ A ++G + WI+S +R V +R +SDA++ T+ DNP LT R+ Sbjct: 82 PPCCVALTK--YGISRVVIATLDPNPKVSGNGVKWLKKHGILV----------TIGTLSKESIKINKGFFQRMTTGIPWIKLKLASSIDGRTALNNGKSKWITSDKARHDVQHVREKSDAIISSSETILFDNPLLTVRN 208 HSP 2 Score: 50.0618 bits (118), Expect = 1.550e-20 Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 3 Query: 96 TSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEP 260 TSP+PN GC+I + + G G+ G K AE+ A++ G +GATAY+ +EP Sbjct: 21 TSPNPNVGCIIVNNN-IIVGSGWHKKTGMKHAEIYALKTSGEKAKGATAYITLEP 74
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_BACSU (Riboflavin biosynthesis protein ribD OS=Bacillus subtilis GN=ribD PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.018e-20 Identity = 53/183 (28.96%), Postives = 96/183 (52.46%), Query Frame = 2 Query: 311 AGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTAR-HGGGHTPMRIVLTQTLNLPEEANLWDVSDASIIVVTQRGARRKFQKYLASRGVEV 856 +GI RV V +R+P + G+ + ++ G++V + + ++A + +N +H + +P+ K A +LDGKIA S+G + WI+S+ +R R +++VG TV+ DNP LT R P+R++L L++PE+A + A + T A + +K L++ GV + Sbjct: 90 SGIKRVFVAMRDPNPLVAGRGISMMKEAGIEVR------EGILADQAER----LNEKFLHFMRTGLPYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNVTKQPVRVILDTVLSIPEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNI 262 HSP 2 Score: 35.4242 bits (80), Expect = 2.018e-20 Identity = 20/71 (28.17%), Postives = 32/71 (45.07%), Query Frame = 3 Query: 90 GFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHGDHTAVSALV 302 G T +P G ++ G++ G G G AEV A+ G+ GA Y+ +EP +G + L+ Sbjct: 18 GQTESNPLVGAVVVKD-GQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELI 87
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_CHLPN (Riboflavin biosynthesis protein ribD OS=Chlamydia pneumoniae GN=ribD PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.436e-20 Identity = 60/186 (32.26%), Postives = 99/186 (53.23%), Query Frame = 2 Query: 317 ITRVVVGIRNPLQHLRGQAVRALRSQGLQVHV-LGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTARHGGG----HTPMRIVLTQTLNLPEEANLWDVSDASIIVVTQRGARRKFQKYLASRGVEVV 859 ++RV V + +P + GQ + LR G+QV+V +GE EA+ S P +++ T P+++ K A ++DG++A S G + WI+ +R V LR S A++VG TV D+P LTAR G P+R+VL ++P + ++D + ++ V T+R + K L S V V+ Sbjct: 98 VSRVFVALVDPDPKVAGQGIAMLRQAGIQVYVGIGES-------EAQASL----QPYLYQRTHNFPWTILKSAASVDGQVADSQGKSQWITCPEARHDVGKLRAESQAILVGSRTVLSDDPWLTARQPQGMLYPKQPLRVVLDSRGSVPPTSKVFDKTSPTLYVTTER-CPENYIKVLDSLDVPVL 271 HSP 2 Score: 30.4166 bits (67), Expect = 4.436e-20 Identity = 15/53 (28.30%), Postives = 27/53 (50.94%), Query Frame = 3 Query: 102 PHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEP 260 P+P GC++ ++ GEG+ G AE A++ G+ Y+++EP Sbjct: 28 PNPWVGCVVVQEN-RIIGEGFHAYAGGPHAEELAIQNASMPISGSDVYVSLEP 79
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_BACAM (Riboflavin biosynthesis protein ribD OS=Bacillus amyloliquefaciens GN=ribD PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.793e-19 Identity = 52/183 (28.42%), Postives = 88/183 (48.09%), Query Frame = 2 Query: 311 AGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTAR-HGGGHTPMRIVLTQTLNLPEEANLWDVSDASIIVVTQRGARRKFQKYLASRGVEV 856 +GI RV + + +P + G+ + L G++V L + EE +N +H + +P+ K A +LDGK A +G + WI+S+ +R R ++VG TV+ DNP LT R P+R++L L +PE AN+ A + T G+ + + L + G++V Sbjct: 90 SGIKRVFIAVEDPNPLVAGKGITMLEEAGIEVKT---GLLRQQAEE-------LNKMFLHFMRTGLPYVTLKAAASLDGKTATETGDSKWITSEAARLDAQQYRKSHQRILVGAGTVKADNPSLTCRLPDAVKQPVRVILDTKLTVPETANVLTDGAAPTWIFTAAGSDVRKKDRLTALGIKV 262 HSP 2 Score: 38.5058 bits (88), Expect = 2.793e-19 Identity = 21/74 (28.38%), Postives = 34/74 (45.95%), Query Frame = 3 Query: 81 KSAGFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHGDHTAVSALV 302 + G T P+P G ++ ++ G G G AEV A+ GS +GA Y+ +EP +G + L+ Sbjct: 15 RGEGQTQPNPLVGAVVVKKR-QIVGMGAHLQYGEAHAEVHAINMAGSLAKGADLYVTLEPCSHYGKTPPCAELI 87
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_ACTPL (Riboflavin biosynthesis protein ribD OS=Actinobacillus pleuropneumoniae GN=ribD PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.722e-17 Identity = 68/216 (31.48%), Postives = 100/216 (46.30%), Query Frame = 2 Query: 146 GC---RRGLLVRAGYQTRGGAGSGSRRLFLQRRHRVSEHGAR*LPR*PHCCFCS----CSD*A---GITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTARHGGGHTPMRIVLTQTLNLPEEANL 763 GC + G +V GY + G R L + +S GA CC CSD GI +V +G +P + G+ LR G++V ++ + EE C +N H ++ P+ + KYAMT DGKIA SG + WI+ +++R RV R + A++VG +TV DNP L +R P+RIV L P + L Sbjct: 40 GCVIVKNGEIVAEGYHEKIGGWHAERNAVLHCKEDLS--GATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGANQLRQAGVEV------VEGLLKEE----CDALNPIFFHYIQTKRPYVLMKYAMTADGKIATGSGESKWITGESARARVQQTRHQYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPLDCQL 243
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_HAEIN (Riboflavin biosynthesis protein ribD OS=Haemophilus influenzae GN=ribD PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.425e-17 Identity = 36/127 (28.35%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 311 AGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTAR 691 AG+ +V+ +++P + G+ ++ L G++ V + + ++A K +N + R +PF K AM+LDG+ A +SG + WI+ +R V +R +S A++ TV D+P L R Sbjct: 96 AGVVKVIAAMQDPNPQVAGKGLKMLSDAGIESTV------NLLNDQAEK----INKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQKMRAKSSALLSTSTTVIADDPSLNVR 212 HSP 2 Score: 46.9802 bits (110), Expect = 2.425e-17 Identity = 21/55 (38.18%), Postives = 35/55 (63.64%), Query Frame = 3 Query: 96 TSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEP 260 T+P+P+ GC++ + G++ GEG+ + G AE A+ G +GATAY+ +EP Sbjct: 26 TTPNPSVGCVLVKN-GEIVGEGFHFKAGQPHAERVALAQAGENAKGATAYVTLEP 79
BLAST of FC899031 vs. ExPASy Swiss-Prot
Match: RIBD_MYCTU (Riboflavin biosynthesis protein ribD OS=Mycobacterium tuberculosis GN=ribD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.160e-17 Identity = 50/169 (29.59%), Postives = 87/169 (51.48%), Query Frame = 2 Query: 311 AGITRVVVGIRNPLQHLRGQAVRALRSQGLQVH--VLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLTARHGGG----HTPMRIVLTQTLNLPEEANLWDVSDASIIVVT 799 A + VV + +P + G L + GLQV VL E + + + E +H+ + +P +KYA ++DG+ AA+ G + WISS+ +R + R +DA++VG TV D+P LTAR G P+R+V+ + ++P EA + + ++++ T Sbjct: 98 ARVGTVVYAVADP-NGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLRE-----------WLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKR-DIPPEARVLNDEARTMMIRT 253 HSP 2 Score: 41.9726 bits (97), Expect = 3.160e-17 Identity = 25/75 (33.33%), Postives = 35/75 (46.67%), Query Frame = 3 Query: 90 GFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHG-DHTAVSALVQTR 311 G T P P G +I G++ G G G AEV A+ G GA + MEP + +G V+AL++ R Sbjct: 25 GTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEAR 99 The following BLAST results are available for this feature:
BLAST of FC899031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC899031 ID=FC899031; Name=FC899031; organism=Citrus clementina; type=EST; length=866bpback to top |