FC899095

Overview
NameFC899095
Unique NameFC899095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT8_YEAST (Hexose transporter HXT8 OS=Saccharomyces cerevisiae GN=HXT8 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 56/190 (29.47%), Postives = 81/190 (42.63%), Query Frame = 2
Query:  374 QPFSLYFTVAVCSMSACVQGWDQTGSNGANLGFPEALGISTSTSNPSHIRNEW---------IVGVVNAAPYLACLFFSCWISDPLNNWLGR-RGTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            +P S Y TV++  +     G+      G   GF           N SH +N +         IV + N    + CLF S      L +  GR  G I    ++    VI  A    W Q F+ R++ G+G G  +   P+  +E  P +IRG ++  WQL   F IFLG+C N G     ++  WR  LG
Sbjct:   58 KPASAYATVSIMCLCMAFGGFMSGWDTGTISGFVNQTDFLRRFGNYSHSKNTYYLSNVRTGLIVSIFNVGSAIGCLFLS-----KLGDIYGRCMGLIIVIVVYMVGIVIQIASIDKWYQYFIGRIIAGIGAGSISVLAPMLISETAPKHIRGTLLACWQLMVTFAIFLGYCTNYGTKTYSNSVQWRVPLG 242          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: RAG1_KLULA (Low-affinity glucose transporter OS=Kluyveromyces lactis GN=RAG1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 61/230 (26.52%), Postives = 101/230 (43.91%), Query Frame = 2
Query:  239 GMEEERDLFEKAAILAQHPEQFEEHRELDEDDRYHLRRETTNKWSQPFSLYFTVAVCSMSAC----VQGWDQTGSNGANLGFPEALG-ISTSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            G   E  +    A+ A  P   +   E D +D      ET  +  +P   Y  V++C +       V GWD TG+    +   + L       ++ SH  +    G++ +   + C      +S+  + W  R G I    I+    +I  A    W Q F+ R++ G+G+G     +P+  +E  P ++RG +V  +QL   FGIFLG+C N G  +  ++  WR  LG
Sbjct:   12 GSGTEHSVDTNTALKAGSPNDLKVSHEEDLNDLEKTAEETLQQ--KPAKEYIFVSLCCVMVAFGGFVFGWD-TGTISGFVNQTDFLRRFGQEKADGSHYLSNVRTGLIVSIFNIGCAVGGIVLSNIGDRWGRRIGLITVIIIYVIGIIIQIASVDKWYQYFIGRIISGLGVGGITVLSPMLISETAPKHLRGTLVSCYQLMITFGIFLGYCTNYGTKNYSNSVQWRVPLG 238          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: GHT1_SCHPO (High-affinity glucose transporter ght1 OS=Schizosaccharomyces pombe GN=ght1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 2
Query:  494 TSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIF-FCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            T T + S  R   I G+VN        FF C IS P  + +G+R +I  FC I+    +I      +W Q+ V ++  G+G+G  +   P Y +E  P +IRG +V+++QL    GIF+  C NMG   +   A WR  +G
Sbjct:   48 TDTYSYSSARQGLITGMVNVGS-----FFGCLISSPTTDRIGKRNSIIGFCVIYLIGVIIQVTAVPSWVQIMVAKIWTGLGIGALSVLAPGYQSEVAPPHIRGTIVVTYQLCVTAGIFIAACINMGTHKLYKTAQWRVSIG 183          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT2_YEAST (High-affinity glucose transporter HXT2 OS=Saccharomyces cerevisiae GN=HXT2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 62/190 (32.63%), Postives = 89/190 (46.84%), Query Frame = 2
Query:  371 SQPFSLYFTV-AVCSMSAC---VQGWDQTGSNGA--NLGFPEALGI--STSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            ++P + Y+TV  +C M A    V GWD    +G      F    G   S  T   S +R   IVG+ N    + C F    +   L +  GRR G +    ++    VI  A +  W Q F+ R++ G+G+G  A  +P   +E  P +IRG  V  +QL    GIFLG+C N G  D  ++  WR  LG
Sbjct:   47 AKPIAAYWTVICLCLMIAFGGFVFGWDTGTISGFVNQTDFKRRFGQMKSDGTYYLSDVRTGLIVGIFN----IGCAFGGLTLGR-LGDMYGRRIGLMCVVLVYIVGIVIQIASSDKWYQYFIGRIISGMGVGGIAVLSPTLISETAPKHIRGTCVSFYQLMITLGIFLGYCTNYGTKDYSNSVQWRVPLG 231          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: HXT4_YEAST (Low-affinity glucose transporter HXT4 OS=Saccharomyces cerevisiae GN=HXT4 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 63/220 (28.64%), Postives = 97/220 (44.09%), Query Frame = 2
Query:  293 PEQFEEHRELDEDDRYHLRRETTNKW----SQPFSLYFTVAVCSMSAC----VQGWDQTGSNG--ANLGFPEALGIS--TSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            P    E  ++ + D  H   E +N +     +P S Y TV++C +       V GWD    +G  A   F    G+     T   S +R   IV + N    +  +  +      L +  GR+ G I    I+    +I  A    W Q F+ R++ G+G+G  A  +P+  +E  P +IRG +V  +QL    GIFLG+C N G     ++  WR  LG
Sbjct:   35 PSNKAERDDMKDFDENH---EESNNYVEIPKKPASAYVTVSICCLMVAFGGFVFGWDTGTISGFVAQTDFIRRFGMKHHDGTYYLSKVRTGLIVSIFNIGCAIGGIILA-----KLGDMYGRKMGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLSPMLISEVSPKHIRGTLVSCYQLMITLGIFLGYCTNYGTKTYTNSVQWRVPLG 246          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: GHT2_SCHPO (High-affinity glucose transporter ght2 OS=Schizosaccharomyces pombe GN=ght2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  512 SHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIF-FCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            S  R   + G+VN         F C IS P+ +  G+R +I  FC ++    ++      +W Q+ V ++  G+G+G  +   P Y +E  P +IRG +V+++QL+   GIF+  C NMG   +   A WR  +G
Sbjct:   58 SSARQGLLTGMVNVGS-----LFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSWVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVTGGIFIAACINMGTHKLHKTAQWRVSIG 187          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.228e-13
Identity = 68/238 (28.57%), Postives = 102/238 (42.86%), Query Frame = 2
Query:  227 TSQHGMEEERDLFEKAAILAQHPEQFEEHRELDEDDRYHLRRETTNKWSQPFSLYFTVAV-CSMSAC---VQGWDQTGSNGA--NLGFPEALGISTSTSNP--SHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRR-GTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            T+ HG   E      +   A  P       +L  DD  H   +      +P S Y TV++ C M A    V GWD    +G      F    G   +  +   S++R   IV + N    +  +  S      L +  GRR G +    I+    +I  A    W Q F+ R++ G+G+G  +  +P+  +E  P +IRG +V  +QL   FGIFLG+C N G     ++  WR  LG
Sbjct:    8 TAAHGTPVENKSVSSSQ--ASTPTNVGSRDDLKVDDDNH-SVDAIELPKKPRSAYITVSILCLMVAFGGFVFGWDTGTISGFVNQTDFIRRFGQEKADGSHYLSNVRTGLIVSIFNIGCAIGGIILS-----KLGDMYGRRIGLMIVVLIYVVGIIIQIASIDKWYQYFIGRIISGLGVGGISVLSPMLISETAPKHIRGTLVSFYQLMITFGIFLGYCTNYGTKTYSNSVQWRVPLG 237          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12
Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  560 YLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNAWRYQLGSA 916
            YLA L  S +++  +    GR+ ++F  G+   +  + +AFA     L V RLLLGVG+G    +TP+Y +E  PA IRG + + +Q+    GI +    N G + +  N WR  LG A
Sbjct:   92 YLAALA-SSFVASAVTRKYGRKISMFVGGVAFLIGSLFNAFATNVAMLIVGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILIANLINYGTSQMAKNGWRVSLGLA 209          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: GHT5_SCHPO (High-affinity glucose transporter ght5 OS=Schizosaccharomyces pombe GN=ght5 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 45/141 (31.91%), Postives = 73/141 (51.77%), Query Frame = 2
Query:  494 TSTSNPSHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTIFFCGIFCTLSVIGSAFA-QTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            T + + S  R   I G+VN        FF C++S PL + +G+R +I F  I   + +I    A  +W Q+ V ++  G+ +G  +   P + +E  PA++RG +V ++QL    GIF+  C NMG   +   A WR  +G
Sbjct:   48 TDSYSYSSARQGLITGMVNVGS-----FFGCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWTGLSIGALSVLAPGFQSEVAPADLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMG 183          
BLAST of FC899095 vs. ExPASy Swiss-Prot
Match: GHT3_SCHPO (High-affinity gluconate transporter ght3 OS=Schizosaccharomyces pombe GN=ght3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = 2
Query:  398 VAVCSMSACVQGWDQTGSNGANLGFPEALGISTSTSNP---SHIRNEWIVGVVNAAPYLACLFFSCWISDPLNNWLGRRGTI-FFCGIFCTLSVIGSAFAQTWEQLFVTRLLLGVGMGPKASTTPIYAAENVPANIRGGMVMSWQLWTAFGIFLGFCANMGMADVGDNA-WRYQLG 910
            V   SMS  +QG D TGS    LG  +         NP   S+  + W   ++       CLF    +S P    +G++ +I FF G++    ++      +W Q+ V ++L GVG+G  +  +P Y +E  P  IRG +V ++Q+++     +  C NMG   +   A WR   G
Sbjct:   10 VVFISMSGWLQGAD-TGSISGILGMRDFQSRFADRYNPISNSYSYSAWRQALLTGTINAGCLF-GAMLSSPFTERIGKKYSICFFSGVYIIAELLLVTAVPSWIQVLVGKILAGVGIGALSVLSPGYQSEVAPPQIRGAVVATYQIFSTGAALVAACINMGTHKLRKTASWRTSFG 183          
The following BLAST results are available for this feature:
BLAST of FC899095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
HXT8_YEAST1.356e-1529.47Hexose transporter HXT8 OS=Saccharomyces cerevisia... [more]
RAG1_KLULA2.558e-1426.52Low-affinity glucose transporter OS=Kluyveromyces ... [more]
GHT1_SCHPO2.558e-1434.04High-affinity glucose transporter ght1 OS=Schizosa... [more]
HXT2_YEAST2.828e-1332.63High-affinity glucose transporter HXT2 OS=Saccharo... [more]
HXT4_YEAST4.824e-1328.64Low-affinity glucose transporter HXT4 OS=Saccharom... [more]
GHT2_SCHPO4.824e-1331.11High-affinity glucose transporter ght2 OS=Schizosa... [more]
KHT2_KLULA8.228e-1328.57Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]
STP9_ARATH1.075e-1235.29Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
GHT5_SCHPO1.403e-1231.91High-affinity glucose transporter ght5 OS=Schizosa... [more]
GHT3_SCHPO4.083e-1228.98High-affinity gluconate transporter ght3 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA77BF06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA77BF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC899095 ID=FC899095; Name=FC899095; organism=Citrus clementina; type=EST; length=917bp
CTTTTCTGCACCTCCTCAAGCACACCCACGAACTCGATCACTCGCCATGT
CGACTAGCATCGAGAAGCCCTCCGTCGCAAAGCGACACCAGAACTACGGG
AGTGATGAACACCTAGAAATCGCCGATGAACGAGGAGAGGACTTCGCCCA
GAACACCAACGCTCGACTCCAGAACCCTCTGCACGGTCTCTCGCGAGAGA
GCCTCAGCAAGAAGGTCGCACTGTTCACATCCCAGCACGGCATGGAGGAG
GAGCGAGACCTCTTTGAGAAGGCGGCGATCCTTGCTCAGCATCCCGAGCA
GTTTGAGGAACACCGAGAACTGGACGAGGACGACCGGTACCACCTTCGAC
GGGAGACGACCAACAAGTGGTCTCAGCCGTTCTCTCTCTACTTCACCGTC
GCCGTTTGCTCAATGAGTGCTTGCGTCCAGGGTTGGGATCAGACTGGATC
GAACGGCGCCAACCTCGGTTTCCCTGAGGCCCTCGGCATCTCCACTTCCA
CCTCGAACCCCAGCCACATCCGTAACGAATGGATCGTAGGAGTCGTCAAC
GCCGCTCCCTATCTCGCCTGCTTGTTCTTCTCGTGCTGGATCTCCGATCC
TCTCAACAACTGGCTCGGTCGACGAGGAACCATCTTCTTCTGCGGAATCT
TCTGCACCCTCTCGGTCATCGGTAGCGCCTTCGCCCAGACCTGGGAGCAG
CTTTTCGTCACTCGTCTCCTCCTCGGTGTTGGCATGGGCCCCAAGGCCTC
CACCACCCCCATCTACGCCGCCGAGAACGTTCCCGCCAACATCCGAGGAG
GCATGGTCATGAGCTGGCAGCTGTGGACTGCGTTCGGTATTTTTCTCGGG
TTCTGCGCCAACATGGGCATGGCGGACGTCGGTGACAACGCCTGGCGATA
CCAGCTCGGCTCTGCTT
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