FC899917

Overview
NameFC899917
Unique NameFC899917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length829
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_DANRE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Danio rerio GN=ddost PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 9.403e-50
Identity = 109/267 (40.82%), Postives = 161/267 (60.30%), Query Frame = 1
Query:   76 DRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN---------------RHEKSGNEQFLTEISKWVFHERGHLK 825
            D + LVL+D+  I+ +HS++F SL  RGF L FK ADDP + L +YGQ+LYD L+LF PSVE FGG+I+V +I  F+D G +++VAA S+  D +RE+ +ECG++FDE+  A VIDH NY +S+  G+HTLI +D  + +KA  I+G K  + PVLF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GSL  FS+               R+E++GN+     +S+WVF E G L+
Sbjct:   29 DGKTLVLLDNPNIRDTHSIFFRSLADRGFDLTFKTADDPGLSLIKYGQFLYDHLILFSPSVEDFGGNINVETITAFIDGGGNVLVAASSDIGDPLRELGSECGIEFDEEKTA-VIDHHNYDISD-PGEHTLIVADPENLLKAPTIVG-KPTDKPVLFKGVGMVADPDNPLVLDILTGSSTSYSYFPDRPITQYPHAVGKNTLLIAGLQARNNARVVFSGSLHFFSDAFFNSAVQKAATGSKRYEQTGNQDLAEALSRWVFKEAGVLR 292          
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_XENLA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus laevis GN=ddost PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.040e-48
Identity = 104/265 (39.25%), Postives = 158/265 (59.62%), Query Frame = 1
Query:   82 RVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMF---------------SNRHEKSGNEQFLTEISKWVFHERGHLK 825
            R LVL+++  ++ +HSL+F SL+ RGF L FK ADDP++ L +YG++LYD L++F PSVE FGG+I++ +I  F+D G  ++VAA S+  D +RE+ +ECG++FDE+  A VIDH NY +S+  G HTLI +D  + +KA  I+G   +  P+LF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GSL  F               SNR+ K+GN +    +S+WVF E G L+
Sbjct:   28 RTLVLMENINLRETHSLFFRSLSDRGFDLSFKTADDPSLSLIKYGEFLYDNLIIFSPSVEDFGGNINIETISSFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTA-VIDHHNYDISD-PGQHTLIVADSENLLKAPTIVGKTPLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGKNTLLIAGLQARNNARVVFSGSLDFFSDSFFNSAVQKAASGSNRYAKTGNYELAMALSRWVFKEEGVLR 289          
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_RAT (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus GN=Ddost PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.040e-48
Identity = 105/265 (39.62%), Postives = 158/265 (59.62%), Query Frame = 1
Query:   82 RVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN---------------RHEKSGNEQFLTEISKWVFHERGHLK 825
            R LVL+D+  ++ +HSL+F SL  RGF+L FK ADDP++ L +YG++LYD L++F PSVE FGG+I+V +I  F+D G  ++VAA S+  D +RE+ +ECG++FDE+  A VIDH NY VS+  G HTLI +D  + +KA  I+G   +  P+LF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GSL  FS+               R+ ++GN +    +S+WVF E G L+
Sbjct:   31 RTLVLLDNLNVRDTHSLFFRSLKDRGFELTFKTADDPSLSLIKYGEFLYDNLIIFSPSVEDFGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTA-VIDHHNYDVSDL-GQHTLIVADTENLLKAPTIVGKSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGRNTLLIAGLQARNNARVIFSGSLDFFSDAFFNSAVQKAAPGAQRYSQTGNYELAVALSRWVFKEEGVLR 292          
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_PONAB (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Pongo abelii GN=DDOST PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 1.040e-48
Identity = 104/265 (39.25%), Postives = 158/265 (59.62%), Query Frame = 1
Query:   82 RVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN---------------RHEKSGNEQFLTEISKWVFHERGHLK 825
            R LVL+D+  ++ +HSL+F SL  RGF+L FK ADDP++ L +YG++LYD L++F PSVE FGG+I+V +I  F+D G  ++VAA S+  D +RE+ +ECG++FDE+  A VIDH NY +S+  G HTLI +D  + +KA  I+G   +  P+LF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GSL  FS+               R+ ++GN +    +S+WVF E G L+
Sbjct:   29 RTLVLLDNLNVRETHSLFFRSLKDRGFELTFKTADDPSLSLIKYGEFLYDNLIIFSPSVEDFGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTA-VIDHHNYDISDL-GQHTLIVADTENLLKAPTIVGKSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGKNTLLIAGLQARNNARVIFSGSLDFFSDSFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLR 290          
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_MOUSE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus GN=Ddost PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.040e-48
Identity = 105/265 (39.62%), Postives = 158/265 (59.62%), Query Frame = 1
Query:   82 RVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN---------------RHEKSGNEQFLTEISKWVFHERGHLK 825
            R LVL+D+  ++ +HSL+F SL  RGF+L FK ADDP++ L +YG++LYD L++F PSVE FGG+I+V +I  F+D G  ++VAA S+  D +RE+ +ECG++FDE+  A VIDH NY VS+  G HTLI +D  + +KA  I+G   +  P+LF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GSL  FS+               R+ ++GN +    +S+WVF E G L+
Sbjct:   31 RTLVLLDNLNVRDTHSLFFRSLKDRGFELTFKTADDPSLSLIKYGEFLYDNLIIFSPSVEDFGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTA-VIDHHNYDVSDL-GQHTLIVADTENLLKAPTIVGKSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGRNTLLIAGLQARNNARVIFSGSLDFFSDAFFNSAVQKATPGAQRYSQTGNYELAVALSRWVFKEEGVLR 292          
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_HUMAN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Homo sapiens GN=DDOST PE=1 SV=4)

HSP 1 Score: 193.741 bits (491), Expect = 1.040e-48
Identity = 104/265 (39.25%), Postives = 158/265 (59.62%), Query Frame = 1
Query:   82 RVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN---------------RHEKSGNEQFLTEISKWVFHERGHLK 825
            R LVL+D+  ++ +HSL+F SL  RGF+L FK ADDP++ L +YG++LYD L++F PSVE FGG+I+V +I  F+D G  ++VAA S+  D +RE+ +ECG++FDE+  A VIDH NY +S+  G HTLI +D  + +KA  I+G   +  P+LF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GSL  FS+               R+ ++GN +    +S+WVF E G L+
Sbjct:   46 RTLVLLDNLNVRETHSLFFRSLKDRGFELTFKTADDPSLSLIKYGEFLYDNLIIFSPSVEDFGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTA-VIDHHNYDISDL-GQHTLIVADTENLLKAPTIVGKSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGKNTLLIAGLQARNNARVIFSGSLDFFSDSFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLR 307          
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_BOVIN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Bos taurus GN=DDOST PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 3.025e-48
Identity = 105/265 (39.62%), Postives = 157/265 (59.25%), Query Frame = 1
Query:   82 RVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN---------------RHEKSGNEQFLTEISKWVFHERGHLK 825
            R LVL+D+  ++ +HSL+F SL  RGF L FK ADDP++ L +YG++LYD L++F PSVE FGG+I+V +I  F+D G  ++VAA S+  D +RE+ +ECG++FDE+  A VIDH NY VS+  G HTLI +D  + +KA  I+G   +  P+LF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GSL  FS+               R+ ++GN +    +S+WVF E G L+
Sbjct:   29 RTLVLLDNLNLRETHSLFFRSLKDRGFVLTFKTADDPSLSLIKYGEFLYDNLIIFSPSVEDFGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTA-VIDHHNYDVSDL-GQHTLIVADTENLLKAPTIVGKSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGKNTLLIAGLQARNNARVIFSGSLDFFSDAFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLR 290          
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_XENTR (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus tropicalis GN=ddost PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.951e-48
Identity = 102/265 (38.49%), Postives = 157/265 (59.25%), Query Frame = 1
Query:   82 RVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMF---------------SNRHEKSGNEQFLTEISKWVFHERGHLK 825
            R LVL+++  ++ +HSL+F SL+ RGF L F+ ADDP++ L +YG++LYD L++F PSVE FGG+I++ +I  F+D G  ++VAA S+  D +RE+ +ECG++FDED  A VIDH NY +S+  G H+LI +D    +KA  I+G   +  P+LF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GS+  F               SNR+ K+GN +    +S+WVF E G L+
Sbjct:   27 RTLVLLENINLRETHSLFFRSLSDRGFDLSFRTADDPSLSLIKYGEFLYDNLIIFSPSVEDFGGNINIETISSFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEDKTA-VIDHHNYDISD-PGQHSLIVADSESLLKAPTIVGKAPLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGKNTLLIAGLQARNNARVVFSGSMDFFSDAFFNSAVQKAAGGSNRYAKTGNYELAVALSRWVFKEEGVLR 288          
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_CANFA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Canis familiaris GN=DDOST PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.739e-48
Identity = 104/265 (39.25%), Postives = 157/265 (59.25%), Query Frame = 1
Query:   82 RVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN---------------RHEKSGNEQFLTEISKWVFHERGHLK 825
            R LVL+D+  ++ +HSL+F SL  R F+L FK ADDP++ L +YG++LYD L++F PSVE FGG+I+V +I  F+D G  ++VAA S+  D +RE+ +ECG++FDE+  A VIDH NY VS+  G HTLI +D  + +KA  I+G   +  P+LF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GSL  FS+               R+ ++GN +    +S+WVF E G L+
Sbjct:   35 RTLVLLDNLNLRETHSLFFRSLKDRAFELTFKTADDPSLSLIKYGEFLYDNLIIFSPSVEDFGGNINVETISTFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTA-VIDHHNYDVSDL-GQHTLIVADPENLLKAPTIVGRSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGKNTLLIAGLQARNNARVVFSGSLDFFSDAFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLR 296          
BLAST of FC899917 vs. ExPASy Swiss-Prot
Match: OST48_PIG (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Sus scrofa GN=DDOST PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.961e-47
Identity = 104/265 (39.25%), Postives = 156/265 (58.87%), Query Frame = 1
Query:   82 RVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASD--DFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXXXXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN---------------RHEKSGNEQFLTEISKWVFHERGHLK 825
            R LVL+D+  ++ +HSL+F SL  RGF L FK ADDP++ L +YG++LYD L++F PSVE FGG+I+V +I  F+D G  ++VAA S+  D +RE+ +ECG++FDE+  A VIDH NY VS+    HTLI +D  + +KA  I+G   +  P+LF+G+G   +P                       ++  P   G    L++ +QARNNAR++ +GSL  FS+               R+ ++GN +    +S+WVF E G L+
Sbjct:   29 RTLVLLDNLNLRETHSLFFRSLKDRGFVLTFKTADDPSLSLIKYGEFLYDNLIVFSPSVEDFGGNINVETISTFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTA-VIDHHNYDVSDL-AQHTLIVADTENLLKAPTIVGKSSLN-PILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGKNTLLIAGLQARNNARVIFSGSLDFFSDAFFNSAVQKATPGSQRYPQTGNYELAVALSRWVFKEEGVLR 290          
The following BLAST results are available for this feature:
BLAST of FC899917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
OST48_DANRE9.403e-5040.82Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_XENLA1.040e-4839.25Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_RAT1.040e-4839.62Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_PONAB1.040e-4839.25Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_MOUSE1.040e-4839.62Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_HUMAN1.040e-4839.25Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_BOVIN3.025e-4839.62Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_XENTR3.951e-4838.49Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_CANFA6.739e-4839.25Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_PIG1.961e-4739.25Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA59BC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA59BC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC899917 ID=FC899917; Name=FC899917; organism=Citrus clementina; type=EST; length=829bp
CTCTTACTGTATTTAACGCTAGCGACTTCGCTGATTCCACTCTTCTCCGT
CGCATTCTCCCCGGAGAACCCGACGGATCGGCGCGTGCTTGTTTTGGTCG
ACGACTTCGCCATCAAGTCCTCCCATTCCCTCTACTTCGGCTCCCTCACA
TCACGCGGCTTCCAGCTCGAGTTCAAGCTAGCCGATGACCCCAACATCGG
CTTGCAACGTTACGGCCAGTACTTGTACGACGCGTTGGTCCTCTTTTGCC
CCTCCGTCGAACGATTTGGAGGGTCTATTGATGTTGCTTCGATTGTGGAT
TTTGTTGACTCGGGCCATGATTTGATTGTTGCCGCGGATAGTAATGCGTC
TGATTTGATTAGGGAAGTTGCCACCGAGTGCGGTGTTGATTTTGATGAGG
ACCCAGCTGCTATGGTTATTGATCACATCAATTATGCAGTTTCAAACTTT
GATGGGGATCATACATTGATTGCTAGTGATGATTTTATCAAGGCTGATGT
GATTTTGGGAAGCAAGAAAATTGAGGCTCCTGTACTCTTCCAGGGGATTG
GGCATTCACTGAATCCTGCCAATAGCCTGGTCTTGAAAGTACTCTCAGCT
TCTTCTTCAGCCTATTCTGCAAATCCGAAGTCTAAGTTGTCAAATCCTCC
ATCGCTCACTGGATCTGCAATCTCTTTAGTTTCAGTTGTGCAGGCAAGAA
ATAATGCTCGGATTTTGATCACTGGCTCATTGAGCATGTTCAGCAATCGA
CATGAGAAATCAGGTAATGAGCAGTTTTTGACAGAAATTAGCAAATGGGT
TTTCCATGAAAGAGGTCATCTTAAGGCTG
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