FC899918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC899918 vs. ExPASy Swiss-Prot
Match: MTG1_MOUSE (Mitochondrial GTPase 1 OS=Mus musculus GN=Mtg1 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.087e-30 Identity = 58/168 (34.52%), Postives = 79/168 (47.02%), Query Frame = 2 Query: 152 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRH----------FDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXXISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDI 625 WFPGHMA + ++ LK D VIEV D+RIP S +P Q L K ++ LNK DLA+ K V+ F +C +D + + + P +MVVGVPNVGKS+LINS+ + L K A VG PG+T+ + Sbjct: 29 WFPGHMAKGLKKMQSSLKSVDCVIEVHDARIPFSGRNPLFQELLGLKPHLLVLNKMDLADLTEQQKIVQRLEEKGLSNVLFTNCVKD-----ENIKQIVPKVMELIRCSYRYHRAETPEYCIMVVGVPNVGKSSLINSLRRQHL------RTGKAARVGGEPGITRAV 185 HSP 2 Score: 70.0922 bits (170), Expect = 5.087e-30 Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 667 IAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLNTRG 837 + RP +++LDTPGVL P I +ETGLKLAL G++ D +VGEE +A YLL LN G Sbjct: 191 VCERPLVFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLNRHG 247
BLAST of FC899918 vs. ExPASy Swiss-Prot
Match: MTG1_HUMAN (Mitochondrial GTPase 1 OS=Homo sapiens GN=MTG1 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.621e-30 Identity = 58/170 (34.12%), Postives = 81/170 (47.65%), Query Frame = 2 Query: 152 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRH----------FDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXXISREPTL--LVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDI 625 WFPGHMA + ++ LK+ D +IEV D+RIPLS +P Q L K ++ LNK DLA+ K ++H F +C +D R+ L +MV+GVPNVGKS+LINS+ + L K K VG PG+T+ + Sbjct: 30 WFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLADLTEQQKIMQHLEGEGLKNVIFTNCVKD-------ENVKQIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHL------RKGKATRVGGEPGITRAV 186 HSP 2 Score: 67.781 bits (164), Expect = 8.621e-30 Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 1 Query: 667 IAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 828 ++ RP +++LDTPGVL P I +ETGLKLAL G++ D +VGEE +A YLL LN Sbjct: 192 VSERPLMFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLN 245
BLAST of FC899918 vs. ExPASy Swiss-Prot
Match: MTG1_BOVIN (Mitochondrial GTPase 1 OS=Bos taurus GN=MTG1 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 8.621e-30 Identity = 54/168 (32.14%), Postives = 80/168 (47.62%), Query Frame = 2 Query: 152 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRH----------FDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXXISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDI 625 WFPGHMA + ++ L++ D +IEV D++IPLS +P Q L K ++ LNK DLA+ K ++H F +C +D + + +MV+GVPNVGKS+LINS+ + L K K VG PG+T+ + Sbjct: 30 WFPGHMAKGLKKMQSSLRLVDCIIEVHDAQIPLSGRNPLFQETLGLKPHLLVLNKMDLADLKEQQKIIQHLEREGIKHVVFTNCVKD-----ENVKQVIPTVTELVGSSYRYHRGEHVEYCIMVIGVPNVGKSSLINSLRRQHL------RKGKATRVGGEPGITRAV 186 HSP 2 Score: 69.3218 bits (168), Expect = 8.621e-30 Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 1 Query: 667 IAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 828 + RP +++LDTPGVL P IP +ETGLKLAL G++ D +VGEE +A +LL LN Sbjct: 192 VCERPLMFLLDTPGVLAPRIPSVETGLKLALCGTVLDHLVGEETLADFLLYTLN 245
BLAST of FC899918 vs. ExPASy Swiss-Prot
Match: RBGA_BACSU (Ribosome biogenesis GTPase A OS=Bacillus subtilis GN=rbgA PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.990e-24 Identity = 52/164 (31.71%), Postives = 80/164 (48.78%), Query Frame = 2 Query: 146 INWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRHFDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXXISR-------EPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVT 616 I WFPGHMA A R + +LK+ D+V E+ D+RIP+SS +P ++ L K R++ LNK D A+ + +W HF++ ++IN+ + R + +++G+PNVGKS LIN + K A G PG+T Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRL-----------AKKNIAKTGDRPGIT 155 HSP 2 Score: 43.1282 bits (100), Expect = 5.990e-24 Identity = 20/45 (44.44%), Postives = 31/45 (68.89%), Query Frame = 1 Query: 691 VLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVL 825 +LDTPG+L P D GL+LA++G+IKDS++ + +A + L L Sbjct: 169 LLDTPGILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
BLAST of FC899918 vs. ExPASy Swiss-Prot
Match: MTG1_SCHPO (Mitochondrial GTPase 1 OS=Schizosaccharomyces pombe GN=mtg1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.527e-20 Identity = 51/179 (28.49%), Postives = 84/179 (46.93%), Query Frame = 2 Query: 152 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANP-------------NILNK------WVRHFDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXX-ISREPTLLVMVVGVPNVGKSALINSIHQIALSRFPVQEKTKRATVGPLPGVTQDIA 628 W+PGHM + +K+ +D+ +EVRD+RIPL+S + ++ L+ K R+I NK DLA+ N+ + W + + ++ S++ S + V VG+PN GKS+++NS+ +AL K+K A VG PGVT+ I+ Sbjct: 17 WYPGHMNKTLKRLKNLTSSNDIFVEVRDARIPLTSRNYVMEDFLNKKNRIIVYNKCDLADTFHTKAKVSKHRIQNLAQQFQNVECWFKETSTPEKSAFITPYVSKAPYFAKELLRLIRTLVDQASANGRVYVYFVGMPNTGKSSILNSLRNVAL------RKSKSAIVGNYPGVTKRIS 189 HSP 2 Score: 46.9802 bits (110), Expect = 3.527e-20 Identity = 22/48 (45.83%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 685 IYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 828 +Y+LDTPG++ PSI E LKL+L G +K+ +V + YLL LN Sbjct: 200 VYMLDTPGIMTPSITKPEDMLKLSLVGCVKEGIVHPVTVVDYLLFHLN 247 The following BLAST results are available for this feature:
BLAST of FC899918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC899918 ID=FC899918; Name=FC899918; organism=Citrus clementina; type=EST; length=894bpback to top |