FC900542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_ARTSA (Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3) HSP 1 Score: 288.886 bits (738), Expect = 1.696e-77 Identity = 128/161 (79.50%), Postives = 144/161 (89.44%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDEEKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQDKKGRKFNQGKIFK 656 +SKDPFD MPKGTFNMDDFKR YSN +E KSIPYFWEKFD ENYSIWY EYKY +EL+KV+MSCNLITGMFQR++KMRKQAFASVC+FG DNDSSISG+WVWRG+DLAF LSPDW IDYESYDW KLDP + +TK +V YF+W+G DK+GRKFNQGKIFK Sbjct: 270 KSKDPFDEMPKGTFNMDDFKRFYSNNEETKSIPYFWEKFDKENYSIWYSEYKYQDELAKVYMSCNLITGMFQRIEKMRKQAFASVCVFGEDNDSSISGIWVWRGQDLAFKLSPDWQIDYESYDWKKLDPDAQETKDLVTQYFTWTGTDKQGRKFNQGKIFK 430
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 3.198e-76 Identity = 130/161 (80.75%), Postives = 142/161 (88.20%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDEEKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQDKKGRKFNQGKIFK 656 +SKDPFD++PKGTFN DDFKR YSNEDE KSIPYF++KFD ENYSIW+GEYKY EELSKVFMSCNLITGMFQRLDKMRK AFASVCLFG D +S+ISG+WVWRG+DLAF LSPDW IDYE YDW KLD S +TKK+V YFSWSG DK GRKFNQGKIFK Sbjct: 271 KSKDPFDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFDAENYSIWFGEYKYNEELSKVFMSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_CAEEL (Probable elongation factor 1-gamma OS=Caenorhabditis elegans GN=F17C11.9 PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.704e-61 Identity = 111/169 (65.68%), Postives = 133/169 (78.70%), Query Frame = 3 Query: 159 DEKPKE--SKDPFDSMPKGTFNMDDFKRCYSNEDEE-KSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQDKKGRKFNQGKIFK 656 D++PKE SKDPF MPKGTF +D+FKR YSNED K+IP+FWE FD +N+SIW EYKYPE+L+ FMSCNLI GM+QRL+K++K AFAS+ LFG DN+S+ISG+WVW+G LAF LSPDW +DYESY WTKLD S TKK V +Y W G D G+KFNQGKIFK Sbjct: 231 DDEPKEEKSKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 398
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_PIG (Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 4.957e-61 Identity = 106/163 (65.03%), Postives = 132/163 (80.98%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSG-QDKKGRKFNQGKIFK 656 ++KDPF +PK TF +D+FKR YSNED ++PYFWE FD + +S+WY EY++PEEL++ FMSCNLITGMFQRLDK+RK AFASV LFG +N SSISGVWV+RG++LAFPLSPDW +DYESY W KLDP S +T+ +V++YFSW G G+ FNQGKIFK Sbjct: 270 KAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAYQHVGKAFNQGKIFK 432
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.957e-61 Identity = 106/163 (65.03%), Postives = 132/163 (80.98%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQ-DKKGRKFNQGKIFK 656 ++KDPF +PK TF +D+FKR YSNED ++PYFWE FD + +S+WY EY++PEEL++ FMSCNLITGMFQRLDK+RK AFASV LFG +N SSISGVWV+RG++LAFPLSPDW +DYESY W KLDP S +T+ +V++YFSW G G+ FNQGKIFK Sbjct: 275 KAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_HUMAN (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3) HSP 1 Score: 234.187 bits (596), Expect = 4.957e-61 Identity = 106/163 (65.03%), Postives = 132/163 (80.98%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQ-DKKGRKFNQGKIFK 656 ++KDPF +PK TF +D+FKR YSNED ++PYFWE FD + +S+WY EY++PEEL++ FMSCNLITGMFQRLDK+RK AFASV LFG +N SSISGVWV+RG++LAFPLSPDW +DYESY W KLDP S +T+ +V++YFSW G G+ FNQGKIFK Sbjct: 275 KAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_RAT (Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3) HSP 1 Score: 233.032 bits (593), Expect = 1.104e-60 Identity = 106/163 (65.03%), Postives = 131/163 (80.37%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQ-DKKGRKFNQGKIFK 656 ++KDPF +PK TF +D+FKR YSNED ++PYFWE FD + +S+WY EY++PEEL++ FMSCNLITGMFQRLDK+RK AFASV LFG +N SSISGVWV+RG+DLAFPLSPDW +DYESY W KLDP S +T+ +V++YFSW G G+ NQGKIFK Sbjct: 275 KAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQDLAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAVNQGKIFK 437
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3) HSP 1 Score: 232.646 bits (592), Expect = 1.442e-60 Identity = 103/163 (63.19%), Postives = 133/163 (81.60%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQ-DKKGRKFNQGKIFK 656 ++KDPF +PK TF +D+FKR YSNED ++PYFWE FD + +S+WY EY++PEEL++ FMSCNLITGMFQRLDK+RK AFASV LFG +N SSISG+WV+RG++LAFPLSPDW +DYESY W KLDP+S +T+ +V++YF+W G G+ FNQGK+FK Sbjct: 275 KAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGIWVFRGQELAFPLSPDWQVDYESYTWRKLDPSSEETQTLVREYFAWEGAFQHVGKAFNQGKVFK 437
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.883e-60 Identity = 105/163 (64.42%), Postives = 131/163 (80.37%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDE-EKSIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQ-DKKGRKFNQGKIFK 656 ++KDPF +PK TF +D+FKR YSNED ++PYFWE FD + +S+WY EY++PEEL++ FMSCNLITGMFQRLDK+RK AFASV LFG +N SSISGVWV+RG++LAFPLSPDW +DYESY W KLDP S + + +V++YFSW G G+ FNQGKIFK Sbjct: 275 KAKDPFAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEEAQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
BLAST of FC900542 vs. ExPASy Swiss-Prot
Match: EF1G_DANRE (Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.460e-60 Identity = 108/163 (66.26%), Postives = 130/163 (79.75%), Query Frame = 3 Query: 174 ESKDPFDSMPKGTFNMDDFKRCYSNEDEEK-SIPYFWEKFDPENYSIWYGEYKYPEELSKVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSSISGVWVWRGKDLAFPLSPDWTIDYESYDWTKLDPASPDTKKMVKDYFSWSGQDKK-GRKFNQGKIFK 656 ++KDPF +PK +F MD+FKR YSNED ++PYFW+ FD E +SIWY EY++PEEL+ FMSCNLITGMFQRLDK+RK AFASV LFG +NDS ISG+WV+RG+DLAFPLS DW IDYESY W KLD S + K MVK+YF+W G+ K G+ FNQGKIFK Sbjct: 280 KAKDPFAHLPKSSFVMDEFKRKYSNEDTMTVALPYFWDHFDREGFSIWYAEYRFPEELTMAFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQDLAFPLSDDWQIDYESYTWRKLDVDSEECKTMVKEYFAWEGEFKHVGKPFNQGKIFK 442 The following BLAST results are available for this feature:
BLAST of FC900542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC900542 ID=FC900542; Name=FC900542; organism=Citrus clementina; type=EST; length=683bpback to top |