FC902027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC902027 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.027e-57 Identity = 109/126 (86.51%), Postives = 111/126 (88.10%), Query Frame = -1 Query: 265 LAPALGDAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREFFSFGMGTLLKLDLKGTRGFFDAFFDLNPPYWHGFLSSRLFFAELAGLSLFFFGHASNFSRFDIVTKGPFPLVKKMGNFAPETL 642 LAPAL DAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREF+SFGM TLLKLDLKGTR FFDAFFDLNP YWHGFLSSRL AELAGLSL FGHASN SR DIVTK P PLVK MGN A ET+ Sbjct: 378 LAPALADAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFLSSRLSLAELAGLSLSLFGHASNSSRLDIVTKCPVPLVKMMGNLALETI 503
BLAST of FC902027 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.218e-42 Identity = 86/126 (68.25%), Postives = 97/126 (76.98%), Query Frame = -1 Query: 265 LAPALGDAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREFFSFGMGTLLKLDLKGTRGFFDAFFDLNPPYWHGFLSSRLFFAELAGLSLFFFGHASNFSRFDIVTKGPFPLVKKMGNFAPETL 642 LAP L +AI + LGSTRMIRG L+ +VWNGLWP+DRRC E +SFGM TLLKLDLKGTR FDAFFDL+P YW GFLSSRL ELA LSL FGH SN +R DIVTK P PLV+ +GN A E+L Sbjct: 373 LAPVLAEAIVKGLGSTRMIRGSQLYHRVWNGLWPLDRRCIGECYSFGMETLLKLDLKGTRRLFDAFFDLDPKYWQGFLSSRLSVKELAILSLCLFGHGSNLTRLDIVTKCPVPLVRLIGNLAIESL 498
BLAST of FC902027 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.591e-42 Identity = 86/126 (68.25%), Postives = 97/126 (76.98%), Query Frame = -1 Query: 265 LAPALGDAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREFFSFGMGTLLKLDLKGTRGFFDAFFDLNPPYWHGFLSSRLFFAELAGLSLFFFGHASNFSRFDIVTKGPFPLVKKMGNFAPETL 642 LAP L +AI E LGSTRMIRG L+ +VWNGLWP DRR RE + FGM TLLKLDL+GTR FDAFFD++P YWHGFLSSRL ELA LSL+ FGHASN +R DIVTK PLVK +GN A E+L Sbjct: 373 LAPVLAEAIVESLGSTRMIRGSQLYHRVWNGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDPKYWHGFLSSRLSVKELAVLSLYLFGHASNLARLDIVTKCTVPLVKLLGNLAIESL 498
BLAST of FC902027 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.916e-34 Identity = 72/119 (60.50%), Postives = 79/119 (66.39%), Query Frame = -1 Query: 283 APALGDAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREFFSFGMGTLLKLDLKGTRGFFDAFFDLNPPYWHGFLSSRLFFAELAGLSLFFFGHASNFSRFDIVTKGPFPLVKKMGN 639 AP + +AI + LGS R G L VW LWPI+RR REFF FGM LLKLDL TR FFDAFFDL P YWHGFLSSRLF EL L F HASN SRF+I+TKG PLV + N Sbjct: 376 APVVANAIIQYLGSERSHSGNELSTAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTSRFEIMTKGTVPLVNMINN 494
BLAST of FC902027 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.493e-32 Identity = 71/125 (56.80%), Postives = 81/125 (64.80%), Query Frame = -1 Query: 271 APALGDAIAECLGS--TRMIRGRPLHQKVWNGLWPIDRRCNREFFSFGMGTLLKLDLKGTRGFFDAFFDLNPPYWHGFLSSRLFFAELAGLSLFFFGHASNFSRFDIVTKGPFPLVKKMGNFAPE 639 AP + +AI LGS + +RG L +VW LWPI+RR REFF FGM LLKLDL TR FFDAFFDL P YWHGFLSSRLF EL L F HASN SR +I+TKG PL K + N + Sbjct: 375 APIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQREFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASNTSRLEIMTKGTVPLAKMINNLVQD 499
BLAST of FC902027 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.326e-32 Identity = 69/124 (55.65%), Postives = 79/124 (63.71%), Query Frame = -1 Query: 268 APALGDAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREFFSFGMGTLLKLDLKGTRGFFDAFFDLNPPYWHGFLSSRLFFAELAGLSLFFFGHASNFSRFDIVTKGPFPLVKKMGNFAPET 639 AP + +AI LGS + + G L VW LWPI+RR REFF FGM LLKLDL TR FFDAFFDL P YWHGFLSSRL+ EL L F ASN SR +I+TKG PLV + N +T Sbjct: 376 APVVANAIIHYLGSEKDLLGNELSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLYLPELIFFGLSLFSRASNTSRIEIMTKGTLPLVNMINNLLQDT 499
BLAST of FC902027 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.326e-32 Identity = 70/119 (58.82%), Postives = 77/119 (64.71%), Query Frame = -1 Query: 283 APALGDAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREFFSFGMGTLLKLDLKGTRGFFDAFFDLNPPYWHGFLSSRLFFAELAGLSLFFFGHASNFSRFDIVTKGPFPLVKKMGN 639 AP + +AI + L S R G L VW LWPI+RR REFF FGM LLKLDL TR FFDAFFDL P YWHGFLSSRLF EL L F HASN SR +I+TKG PLV + N Sbjct: 374 APVVANAIIQYLSSERSHSGDELSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTSRLEIMTKGTLPLVHMINN 492
BLAST of FC902027 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.815e-31 Identity = 66/123 (53.66%), Postives = 78/123 (63.41%), Query Frame = -1 Query: 271 APALGDAIAECLGSTRMIRGRPLHQKVWNGLWPIDRRCNREFFSFGMGTLLKLDLKGTRGFFDAFFDLNPPYWHGFLSSRLFFAELAGLSLFFFGHASNFSRFDIVTKGPFPLVKKMGNFAPE 639 AP + ++I + L S + G L VW LWPI+RR REFF FGM LLKLDL+GTR FFDAFFDL P YWHGFLSSRLF EL L F HASN + +I+ KG PLV + N + Sbjct: 379 APIVANSIVQYLVSDSGLSGNDLSADVWKDLWPIERRRQREFFCFGMDILLKLDLEGTRRFFDAFFDLEPRYWHGFLSSRLFLPELVPFGLSLFSHASNTCKLEIMAKGTLPLVNMINNLVQD 501
BLAST of FC902027 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11 Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = -1 Query: 322 KVWNGLWPIDRRCNREFFSFGMGTLLKLDLKGTRGFFDAFFDLNPPYWHGFLSSRLFFAELAGLSLFFFGHASNFSRFDIV 564 + WN LWP +R+ R FF FG+ +L+LD++G R FF AFF + W GFL S L A+L + + F A N R ++ Sbjct: 427 QAWNTLWPQERKRQRSFFLFGLALILQLDIEGIRSFFRAFFRVPKWMWQGFLGSSLSSADLMLFAFYMFIIAPNDMRKGLI 507 The following BLAST results are available for this feature:
BLAST of FC902027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC902027 ID=FC902027; Name=FC902027; organism=Citrus clementina; type=EST; length=642bpback to top |