FC904699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: NSUN5_MOUSE (Putative methyltransferase NSUN5 OS=Mus musculus GN=Nsun5 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 6.688e-41 Identity = 92/208 (44.23%), Postives = 127/208 (61.06%), Query Frame = 1 Query: 163 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATSFPQWNCRGLPVFEGSEHLLRTDPVED-KEGFFIALFVKGNII 783 V+DAC+APGNKT ++AAL+K +GKI A + + +R+ + + +G + E+ DFL + P D YS+V+ ILLDPSCSGSG + +L+ H ERL L+ FQ++AL HAL FP ++R+VYSTCS+ Q ENEDV++ L S F+LA P W RGL F GSEH LR P GFFIA+F + ++ Sbjct: 230 VIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLVARAGVSCCELAEKDFLTVSPSDQRYSQVQYILLDPSCSGSGMLSRQLEE--------HGEGTPSKERLQALAGFQQRALCHALRFPSLQRLVYSTCSLCQEENEDVVQEALQ-HNSGTFRLAPVLPTWPHRGLSTFPGSEHCLRASPETTLTGGFFIAVFERAEVV 428
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: NSUN5_HUMAN (Putative methyltransferase NSUN5 OS=Homo sapiens GN=NSUN5 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 8.735e-41 Identity = 92/201 (45.77%), Postives = 125/201 (62.19%), Query Frame = 1 Query: 163 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATSFPQWNCRGLPVFEGSEHLLRTDPVED-KEGFFIAL 762 V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L F+LA + P W RGL F G+EH LR P GFF+A+ Sbjct: 230 VIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPV---RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDALQ-QNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAV 421
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: YEY6_SCHPO (Putative methyltransferase C2C4.06c OS=Schizosaccharomyces pombe GN=SPAC2C4.06c PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 1.351e-33 Identity = 88/206 (42.72%), Postives = 116/206 (56.31%), Query Frame = 1 Query: 163 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE-MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-QLATSFPQWNCRGLPVF----EGSEHLLRTDP-VEDKEGFFIA 759 ++D C+APGNKT HLAA K I A E + +RV+ L+ + +SGA N+ + H DF DPK Y V ILLDPSCSGSG + R D+LL G+ D TE ERL L +FQ L+HAL FP V YSTCS+H++ENE V+ VL + L + P W RG+P + +E ++R P GFF+A Sbjct: 214 IIDGCAAPGNKTTHLAACFP-KSHIFAFERDAKRVQTLRKMVGISGANNVTIEHQDFTLTDPKSDLYRNVTHILLDPSCSGSGIVS-RQDYLL-----GNEQDVTEDTERLENLCSFQSTILKHALQFPNCRHVTYSTCSVHRLENEQVVCEVLSQEPDWKCNSLTKTLPNWKTRGIPEYCAQPSMAEGMIRCKPGAGGTIGFFVA 412
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: NSN5C_HUMAN (Putative methyltransferase NSUN5C OS=Homo sapiens GN=NSUN5C PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.950e-32 Identity = 85/208 (40.87%), Postives = 119/208 (57.21%), Query Frame = 1 Query: 193 KTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATSFPQWNCRGLPVFEGSEHLLRTDPVED-KEGFFIALFVKGNIIDRSKNPTMPS 813 KT HLAAL+K +GKI A +L+ R+ + + +G + E+ DFL + P DP Y EV +LLDPSCSGSG + +L+ T P RL+ L+ FQ++AL HAL+FP ++R+VYS CS+ Q ENED+++ L F+LA + P RGL F G+EH LR P GFF+A +I+R + PT S Sbjct: 56 KTSHLAALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLLDPSCSGSGMPSRQLE-----EPGAGTPSPV---RLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVQDALQ-QNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVA------VIERVEMPTSAS 248
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: NSN5B_HUMAN (NOL1/NOP2/Sun domain family member 5B OS=Homo sapiens GN=NSUN5B PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.553e-24 Identity = 70/170 (41.18%), Postives = 95/170 (55.88%), Query Frame = 1 Query: 298 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATSFPQWNCRGLPVFEGSEHLLRTDPVED-KEGFFIALFVKGNIIDRSKNPT 804 G + E+ DFL + P DP Y EV +LLDPSCSGSG + +L+ T P RL+ L+ FQ++AL HAL+FP ++R+VYS CS+ Q ENED++ L F+LA + P RGL F G+EH LR P GFF+A +I+R + PT Sbjct: 9 GVSCCELAEEDFLAVSPLDPRYREVHYVLLDPSCSGSGMPSRQLED-----PGAGTPSPV---RLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVPDALQ-QNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVA------VIERVEMPT 163
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: YNC2_YEAST (Uncharacterized protein YNL022C OS=Saccharomyces cerevisiae GN=YNL022C PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 80/231 (34.63%), Postives = 114/231 (49.35%), Query Frame = 1 Query: 163 VLDACSAPGNKTVHLAALM------KGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL---------------DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQLATS---FPQWNCRGLPVFEGSEHLLRT----DPVEDKEGFFIAL 762 V+D+CSAPGNKT H A+ + +I A E + ER + L+ IK++G + NI V GDF L + Y +V ++DPSCSGSG + ++P A RL KLS+FQ + ++HA+SFP +++VYSTCSIH ENE V+ +L +G+++A P W RG E E + R DP + EG AL Sbjct: 246 VIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPERAKVLQKMIKIAGCSPNISVNVGDFTKLATPEK-YKDVTCFIVDPSCSGSGIFGRKFFDSFNRRKIDDKDDDGGIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPAAKKIVYSTCSIHAEENERVVIDLLLDKSVREWGWKVAPKREVIPSWPRRG--KVEEFEEVFRDGVTYDPQQLAEGCIRAL 473
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: RSMF_SHEPA (Ribosomal RNA small subunit methyltransferase F OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rsmF PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16 Identity = 74/212 (34.91%), Postives = 105/212 (49.53%), Query Frame = 1 Query: 163 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDV---IKSVLPIAMSFGFQLATSFPQWNCRGLPVFEGSEHLLRTDPVEDKEGFFIALFVKGNIIDR 789 VLD SAPG+KT +AALMK +G ++A E + RV+ L + G AN + H D + + +ILLD CSG GT + D L + + E ++ SAF AL G +VYSTC++ + EN+DV +KS+ A+ FG LAT FPQ EG H+ + D EGFF+A K + ++R Sbjct: 131 VLDMASAPGSKTTQIAALMKNQGLLIANEYSASRVKVLHANVARMGVANCALTHFDARVFG--EYMFETFDSILLDAPCSGEGTIRKDPD-ALKNWDNNDDKGIVETQKALIESAFL------ALKVGG--SLVYSTCALSRQENQDVCHHLKSLYGDAVEFG-SLATLFPQ--ADKACTEEGFLHV--WPQIYDSEGFFVAKIYKTSAVER 326
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: RSMF_SHESH (Ribosomal RNA small subunit methyltransferase F OS=Shewanella sediminis (strain HAW-EB3) GN=rsmF PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.270e-15 Identity = 72/215 (33.49%), Postives = 104/215 (48.37%), Query Frame = 1 Query: 163 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL-LPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDV---IKSVLPIAMSFGFQLATSFPQWNCRGLPVFEGSEHLLRTDPVEDKEGFFIALFVKGNIIDRSK 795 +LD SAPG+KT +AA+M G ++A E + RV+ L + G +N + H D + Y + AILLD CSG GT R D L L + + E ++ SAF L+ +VYSTC++ ++EN+DV ++S P A+ F LAT FP + EG H+ + D EGFFIA K ++R K Sbjct: 117 ILDMASAPGSKTTQIAAMMDNSGLLIANEYSSSRVKVLHANVLRMGVSNTALTHFDARVFG--EYLYDQFDAILLDAPCSGEGTI--RKDPLALNNWGLAENSAIAETQKALLESAF--------LALKTGGSLVYSTCALSKLENQDVCEHLRSTFPEAVEFE-SLATLFP--DADKACTDEGFLHV--WPQIYDSEGFFIAKITKTCDVERQK 314
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: RSMF_AERS4 (Ribosomal RNA small subunit methyltransferase F OS=Aeromonas salmonicida (strain A449) GN=rsmF PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15 Identity = 72/207 (34.78%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 163 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR---HALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG-----FQLATSFPQWNCRGLPVFEGSEHLLRTDPVEDKEGFFIA 759 +LDA +APG+KT +AALM +G +VA E + R++ L I+ G N+ + H D P + AILLD CSG GT + D L +E +++++A Q+ L HAL GV +VYSTC++ Q EN+ V +S+L FG LA FP N EG H+ + D EGFF+A Sbjct: 121 LLDAAAAPGSKTTQIAALMNNQGMLVANEYSSSRLKVLSANIQRCGVTNVGMTHFDAKVFGQWLPETFD--AILLDAPCSGEGTVRKDEDAL----------RNWSIESIDEIAAVQQGLLESAFHALKPGGV--LVYSTCTLSQQENQAVCQSLLE---KFGDALTLDSLADLFP--NAEQACTPEGYLHV--WPQIFDSEGFFVA 306
BLAST of FC904699 vs. ExPASy Swiss-Prot
Match: RSMF_SHELP (Ribosomal RNA small subunit methyltransferase F OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rsmF PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.075e-14 Identity = 71/215 (33.02%), Postives = 105/215 (48.84%), Query Frame = 1 Query: 163 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA-LSFPGVERVVYSTCSIHQVENEDV---IKSVLPIAMSFGFQLATSFPQWNCRGLPVFEGSEHLLRTDP-VEDKEGFFIALFVKGNIIDRS 792 +LD SAPG+KT LAA+M +G +VA E + RV+ L ++ GA+N+ + H D + AILLD C G GT + D L D +E+E +++ Q+ + A L+ +VYSTC++++ EN+DV +K+ A+ F LA FP G SE L P + D EGFFIA K + R+ Sbjct: 118 LLDMASAPGSKTTQLAAMMNNQGLLVANEYSSSRVKVLHANVQRMGASNLALTHFDARVFGKY--LFESFDAILLDAPCGGEGTVRKDPDAL-------KHWDESEIE---AIASVQRDLIESAFLALKPGGSLVYSTCTLNRRENQDVCLHLKATYGDAVQFE-SLAGLFP-----GAEKASTSEGFLHVWPQIFDSEGFFIAKLTKIAAVPRN 314 The following BLAST results are available for this feature:
BLAST of FC904699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >FC904699 ID=FC904699; Name=FC904699; organism=Citrus clementina; type=EST; length=879bpback to top |