FC909980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC909980 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.194e-16 Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 212 TDVLIRVQGTCFLLHRDPLTSRSTYLKRQLTDHKELTLAPP--LNIT--AETFSLVAEFCYGTRIAITPFNVAALRTAAELLQMTEANCDGDENLKQLTETFFRRIVTVNKEYALIVFRSSLALLPEAETTAFLVSRCIEALS 628 +D+ I V G F LH+ PL SRS ++R + +H++ ++ LN+ AETF L A+FCYG IT NVA L ++ L+MTE +NL TE + IV N E + V + S LLP A+ ++ RCI+A++ Sbjct: 43 SDITIEVNGGNFALHKFPLVSRSGRIRRIVAEHRDSDISKVELLNLPGGAETFELAAKFCYGINFEITSSNVAQLFCVSDYLEMTEEY--SKDNLASRTEEYLESIVCKNLEMCVQVLKQSEILLPLADELN-IIGRCIDAIA 182
BLAST of FC909980 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.603e-15 Identity = 61/210 (29.05%), Postives = 97/210 (46.19%), Query Frame = 2 Query: 188 WTLANGCKTDVLIRVQGTCFLLHRDPLTSRSTYLKRQLTDHKELTLAPPLNIT-----AETFSLVAEFCYGTRIAITPFNVAALRTAAELLQMTEANCDGDENLKQLTETFFRRIVTVNKEYALIVFRSSLALLPEAETTAFLVSRCIEALSLTDEGYGVVEL-------FEEVVRLGAEDFKLVAESMNQRFTSHDVLYEIVDLYLQKN 781 W + TDV++ V F LH+ L ++S Y+++ + + K+ + +N++ E F A+FCYG IT NVAAL AAE LQMT+ C D NL T+ F ++ + A++V +S LLP + +V RC++ + + EE+ L + F V SM QR L + Y +K+ Sbjct: 24 WVFSQDIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIMESKDSDVTR-INLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYC--DNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLG-IVRRCVDVVGAKACNEAMFPCRTPPNWWTEELCILDVDFFSDVVSSMKQRGVKPSSLASAIITYTEKS 229
BLAST of FC909980 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.734e-15 Identity = 60/169 (35.50%), Postives = 91/169 (53.85%), Query Frame = 2 Query: 188 WTLANGCKTDVLIRVQGTCFLLHRDPLTSRSTYLKRQLT------DHKELTLAPPLNITAETFSLVAEFCYGTRIAITPFNVAALRTAAELLQMTEANCDGDENLKQLTETFFRRIVTVNKEYALIVFRSSLALLPEAETTAFLVSRCIEALSL---TDE---GYGVVE 658 W G +D+++ V F LH+ PL SRS ++R++ D K L L +TF LVA+FCYG ++ +T NV LR AAE L+MTE + G+ NL TETFF ++V + + ++ S +L A+ + +CIE+L++ TD G+ VVE Sbjct: 20 WFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVMERRIAEASKEGDDKCLIEISDLPGGDKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEH--GEGNLISQTETFFNQVVLKSWKDSIKALHSCDEVLEYADELN-ITKKCIESLAMRASTDPNLFGWPVVE 185
BLAST of FC909980 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.342e-13 Identity = 49/153 (32.03%), Postives = 83/153 (54.25%), Query Frame = 2 Query: 182 KNWTLANGCKTDVLIRVQGTCFLLHRDPLTSRSTYLKRQLTDHKE----LTLAPPLNITAETFSLVAEFCYGTRIAITPFNVAALRTAAELLQMTEANCDGDENLKQLTETFFRRIVTVNKEYALIVFRSSLALLPEAETTAFLVSRCIEALS 628 ++W +A +D+L+++ F LH+ PL SRS + R + + ++ + + L E F L ++FCYG + +T N++ LR AAE L+MTE +G NL TE F +V + +++V +S L P AE +V RC E+++ Sbjct: 43 QSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYESRDPDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEG--NLIFKTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQ-IVRRCSESIA 192
BLAST of FC909980 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.834e-11 Identity = 51/162 (31.48%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 182 KNWTLANGCKTDVLIRVQGTCFLLHRDPLTSRSTYLKRQL-----TDHKELTLAPPLNIT--------AETFSLVAEFCYGTRIAITPFNVAALRTAAELLQMTEANCDGDENLKQLTETFFRRIVTVNKEYALIVFRSSLALLPEAETTAFLVSRCIEALS 628 ++W + + +D+L++V F LH+ P+ SRS + R + D E A + + A +F L A F YG + +T N++ LR AAE L+MTE +G NL TE F +V + ++ V +S AL P AE +V RC E+++ Sbjct: 41 RSWYVNSDIPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAAAVAVVEMGDLPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEG--NLIFKTEAFLSYVVLSSWRDSIAVLKSCEALSPWAENLQ-IVRRCSESIA 199 The following BLAST results are available for this feature:
BLAST of FC909980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC909980 ID=FC909980; Name=FC909980; organism=Citrus clementina; type=EST; length=864bpback to top |