FC910038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 8.000e-81 Identity = 166/259 (64.09%), Postives = 190/259 (73.36%), Query Frame = 3 Query: 81 MDGSCMDEXXXXXXXXXXPPITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRN---YGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS--TSKGLLLNFEDVTGKVWRFR 842 MD SC+DE S PP + L R+GSG SSV+LD E G+E ESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNE+EEAAR+YDIAA RFRGRDAV NFK + ++GD +AFL +HSK+EIVDMLRKHTY DELEQ+ + +DANGKR +G +T +D+VLK R+ LFEKAVTPSDVGKLNRLVIPKQHAEKHFPL S S +KG+L+NFEDV GKVWRFR Sbjct: 1 MDSSCIDEISSSTSESFSATTAKKLSPPPAAALR-LYRMGSGGSSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNV------LEDGD--LAFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKR-------NGSSTT-QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFR 242
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.970e-80 Identity = 161/238 (67.65%), Postives = 183/238 (76.89%), Query Frame = 3 Query: 156 SIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATA-FGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGST--------SKGLLLNFEDVTGKVWRFR 842 S PP S L R+GSG SSV+LDSE GVE ESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAA +YDIA +RFRGRDAVTNFK + D D E AFL +HSK+EIVDMLRKHTY DE EQS+R + ++ +GKR G+ TA +G+D VL+AR+ LFEK VTPSDVGKLNRLVIPKQHAEKHFPL + +T +KG+L+N ED TGKVWRFR Sbjct: 33 SSPPATSMR-LYRMGSGGSSVVLDSENGVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFK------SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKF-VNGDGKR-------SGLETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFR 255
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.179e-78 Identity = 164/257 (63.81%), Postives = 185/257 (71.98%), Query Frame = 3 Query: 81 MDGSCMDEXXXXXXXXXXPPITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHG--EGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS-KGLLLNFEDVTGKVWRFR 842 M+ S +DE P PA S +L R+GSG SSV+LDSE GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAARAYD+A RFR RDAVTNFK + DE +++ FL+SHSKSEIVDMLRKHTYN+ELEQSKR + N R + DGV+T ++ + LFEKAVTPSDVGKLNRLVIPK HAEKHFPL S + S KG+LLNFEDV GKVWRFR Sbjct: 1 MESSSVDESTTSTGSICETPAITPAK---KSSVGNLYRMGSG-SSVVLDSENGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDV-----KMDEDEVD--FLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTT-----GFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFR 241
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 1.047e-72 Identity = 159/240 (66.25%), Postives = 177/240 (73.75%), Query Frame = 3 Query: 156 SIPPTKS--PESLC-RVGSGASSVILDSEAGVE----AESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVA-TAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKVWRFR 842 SIP KS P SL R+GSG +SV+LDSE GVE AESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAARAYD+AA RFRGRDAVTNFK T+ +E E+ FL++HSKSEIVDMLRKHTY +EL+Q KRN D NGK V T F K + LFEK VTPSDVGKLNRLVIPK AEKHFPL G+ + KG+LLNFEDV GKVWRFR Sbjct: 16 SIPARKSSSPASLLYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKD-----TTFEE---EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRN--RDGNGKETTAFALASMVVMTGF------KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFR 238
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica GN=Os01g0693400 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.855e-67 Identity = 137/239 (57.32%), Postives = 165/239 (69.04%), Query Frame = 3 Query: 192 RVGSGASSVILDSEAGVEAESR------------------KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDG-VATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ---SGSTSKGLLLNFEDVTGKVWRFR 842 R+GSGAS+V+ +E G EA+S KLPSSK+KGVVPQPNGRWGAQIYE+HQRVWLGTF E++AARAYD+AAQRFRGRDAVTNF+ ++ + + E+ FL++ SK+E+VDMLRKHTY DEL QSKR + +G +++ ARD LF+K VTPSDVGKLNRLVIPKQHAEKHFPLQ +G SKG+LLNFED GKVWRFR Sbjct: 36 RMGSGASAVVDAAEPGAEADSGSGGRVCGGGGGGAGGAGGKLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNFRPLA---EADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLSNGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFR 271
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: Y5498_ORYSJ (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica GN=Os05g0549800 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.913e-66 Identity = 141/248 (56.85%), Postives = 167/248 (67.34%), Query Frame = 3 Query: 180 ESLCRVGSGASSVILDSEAGVEAESR---------KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ------------------SGSTSKGLLLNFEDVTGKVWRFR 842 ++L RVGSGAS+V+ +E G EA+S KLPSSKYKGVVPQPNGRWGAQIYE+HQRVWLGTF E EAARAYD+AAQRFRGRDAVTNF+ ++ S E +E+ FL+S SK+E+VDMLRKHTY +EL Q+KR + A KH +++ AR+ LF+K VTPSDVGKLNRLVIPKQHAEKHFPLQ G KG+LLNFED GKVW+FR Sbjct: 28 KALQRVGSGASAVMDAAEPGAEADSGGERRGGGGGKLPSSKYKGVVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLA---ESDPEAAVELRFLASRSKAEVVDMLRKHTYLEELTQNKRAFA--AISPPPPKHPASSPTSSS-------AAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGKVWKFR 263
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: Y1410_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0141000 OS=Oryza sativa subsp. japonica GN=Os01g0141000 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 9.516e-58 Identity = 124/221 (56.11%), Postives = 145/221 (65.61%), Query Frame = 3 Query: 207 ASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ---------SGSTSKGLLLNFEDVTGKVWRFR 842 A V+ A A+ SS+YKGVVPQPNGRWGAQIYE+H RVWLGTF +EE AARAYD+AA R+RGRDA TNF + + E+AFL++HSK+EIVDMLRKHTY DEL Q ++ G G G A AR+ LFEKAVTPSDVGKLNRLV+PKQHAEKHFPL+ + +T KG+LLNFED GKVWRFR Sbjct: 50 ADEVVTSRPAAAAAQQ----SSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRYRGRDAATNFPGAAASAA-------ELAFLAAHSKAEIVDMLRKHTYADELRQG-------------LRRGRGMG---ARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWRFR 243
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: Y1407_ORYSJ (Putative AP2/ERF and B3 domain-containing protein Os01g0140700 OS=Oryza sativa subsp. japonica GN=Os01g0140700 PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.795e-56 Identity = 129/249 (51.81%), Postives = 149/249 (59.84%), Query Frame = 3 Query: 189 CRVGSGASSVILDSEAGVEAESRKL--------------------------PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPL-----QSGSTSKGLLLNFEDVTGKVWRFR 842 C GSG SS DS+ E E PSS+YKGVVPQPNGRWGAQIYE+H RVWLGTF +EE AARAYD+AA RFRGRDAVTN + + G S+ E +AFL++HSK+E+VDMLRKHTY+DEL+Q R G R AR+ LFEKAVTPSDVGKLNRLV+PKQ AE+HFP S + KG+LLNFED GKVWRFR Sbjct: 12 CNSGSGGSSSTTDSKQEEEEEEELAAMEEDELIHVVQAAELRLPSSTTATRPSSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRFRGRDAVTN-RAPAAEGASAGE----LAFLAAHSKAEVVDMLRKHTYDDELQQGLRR------GSRA--------------QPTPRWAREPLFEKAVTPSDVGKLNRLVVPKQQAERHFPFPLRRHSSDAAGKGVLLNFEDGDGKVWRFR 235
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: RAVL3_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis thaliana GN=At1g51120 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.811e-24 Identity = 77/203 (37.93%), Postives = 108/203 (53.20%), Query Frame = 3 Query: 267 SSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDEL---EQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSG-----STSKG---LLLNFEDVTGKVWRFR 842 ++K+KGVV Q NG WGAQIY H+R+WLGTF EAA AYD A+ + R DA + + + + E D + + + + I D +H + D L Q N + K+V+ GEG + S QLF+K +TPSDVGKLNRLVIPK++A K+ P S TS+G + + F D + W+FR Sbjct: 44 TTKFKGVVQQQNGHWGAQIYADHRRIWLGTFKSAHEAAAAYDSASIKLRSFDA-NSHRNFPWSDFTLHEPDFQECYTTEAVLNMIRDGSYQHKFRDFLRIRSQIVANINI-VGSKQVLGGGEGGQESNKCFS------CTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWKFR 238
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: RAVL2_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g50680 OS=Arabidopsis thaliana GN=At1g50680 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.533e-23 Identity = 74/202 (36.63%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 273 KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELE-QSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS-----------KGLLLNFEDVTGKVWRFR 842 KYKGVV Q NG WGAQIY H+R+WLGTF +EAA AYD A+ + R DA + + + + +E D + + + + I D +H + D L +S+ ++ G K G+ SD+ QLF+K +TPSDVGKLNRLVIPK++A K+ P S S + + + F D + W+FR Sbjct: 27 KYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDA-NSHRNFPWSTITLNEPDFQNCYTTETVLNMIRDGSYQHKFRDFLRIRSQIVASINIGGP---KQARGE---VNQESDKCFSC-TQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAMRQWKFR 220 The following BLAST results are available for this feature:
BLAST of FC910038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC910038 ID=FC910038; Name=FC910038; organism=Citrus clementina; type=EST; length=844bpback to top |