FC910039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_NEUCR (NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-49 PE=1 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 4.337e-80 Identity = 159/237 (67.09%), Postives = 175/237 (73.84%), Query Frame = 1 Query: 58 GGSPQRLCLRQRPSPVPS--SIRCLSTTPARRLAAPVPEPSQAFNNTPAMPQQGTRLIPVDPSFGHPVDQSEPQHMNLARDKGDSPEE----RKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 G + +R C+RQ + + S R S + RR A P E QGTRL+P F D + + P++ RK+RHYTVNFGPQHPAAHGVLRLILEL GEEIVRADPHVGLLHRGTEKL EY+TYLQALPYFDRLDYVSMMTNEQCF+LAVEKLLN+EIPERAKWIRT+F EITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG Sbjct: 10 GRNAKRHCMRQSTTIAHNLNSTRAFSASALRRYAEPSYEG------------QGTRLVPTGDDFAPNNDLYGLEALKADGAPRVPPQDHILARKVRHYTVNFGPQHPAAHGVLRLILELKGEEIVRADPHVGLLHRGTEKLCEYRTYLQALPYFDRLDYVSMMTNEQCFALAVEKLLNVEIPERAKWIRTMFAEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 234
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_RECAM (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana GN=NAD7 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 8.778e-65 Identity = 115/145 (79.31%), Postives = 133/145 (91.72%), Query Frame = 1 Query: 316 RKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 +K++++T+NFGPQHPAAHGVLRL+LELNGE + RADPH+GLLHRGTEKLIEYK YLQALPYFDRLDYVSMM E +SLAVEKLL E+P+RA++IR LF EITRILNHLM+V +HA+DVGA+TPFLWGFEEREKLMEFYERVSG Sbjct: 8 KKLKNFTMNFGPQHPAAHGVLRLVLELNGEVVNRADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEKLLGCEVPKRAQYIRVLFCEITRILNHLMAVTTHALDVGAMTPFLWGFEEREKLMEFYERVSG 152
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_NEPOL (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Nephroselmis olivacea GN=NAD7 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 8.778e-65 Identity = 114/145 (78.62%), Postives = 133/145 (91.72%), Query Frame = 1 Query: 316 RKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 +K++++T+NFGPQHPAAHGVLRL+LELNGE + RADPH+GLLHRGTEKLIEYKTY QALPYFDRLDYVSMM E +SLAVEKLL+ E+PERA++IR LF EITRILNHL+++ +HAMDVGALTPFLW FEEREKL+EFYERVSG Sbjct: 10 KKVKNFTLNFGPQHPAAHGVLRLVLELNGEVVARADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCQEHAYSLAVEKLLHCEVPERAQYIRVLFSEITRILNHLLALTTHAMDVGALTPFLWAFEEREKLIEFYERVSG 154
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_MOUSE (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Mus musculus GN=Ndufs2 PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.147e-64 Identity = 127/220 (57.73%), Postives = 155/220 (70.45%), Query Frame = 1 Query: 112 SIRCLSTTPARRLAAPVPEPSQAFNNTPAMPQQGTRLIPVDPSFGHPVD------QSEPQHMNLAR-DKGDSPEERKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 ++RCL R + APV P P+ P +G R D + E H + D +E+ + + T+NFGPQHPAAHGVLRL+LEL+GE + + DPH+GLLHRGTEKLIEYKTYLQALPYFDRLDYVSMM NEQ +S+AVEKLLNI+ P RA+WIR LFGEITRILNH+M+V +HA+D+GA+TPF W FEEREK+ EFYERVSG Sbjct: 6 ALRCL-----RGVGAPVLRPGSGIR-LPSQPSRGARQWQPDIEWAEQFSGAVMYPSKETAHWKPPPWNDVDILKEKAVTNMTLNFGPQHPAAHGVLRLVLELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSIAVEKLLNIQPPPRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSG 219
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_BOVIN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Bos taurus GN=NDUFS2 PE=1 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 5.690e-64 Identity = 111/150 (74.00%), Postives = 133/150 (88.67%), Query Frame = 1 Query: 301 DSPEERKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 D P++ + + T+NFGPQHPAAHGVLRL++EL+GE + + DPH+GLLHRGTEKLIEYKTYLQALPYFDRLDYVSMM NEQ +SLAVEKLLNI+ P RA+WIR LFGEITR+LNH+M+V +HA+D+GA+TPF W FEEREK+ EFYERVSG Sbjct: 70 DPPKDTLVSNLTLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQPPPRAQWIRVLFGEITRLLNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSG 219
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_RAT (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Rattus norvegicus GN=Ndufs2 PE=1 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.431e-64 Identity = 113/150 (75.33%), Postives = 133/150 (88.67%), Query Frame = 1 Query: 301 DSPEERKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 D +E+ + + T+NFGPQHPAAHGVLRL+LEL+GE + + DPH+GLLHRGTEKLIEYKTYLQALPYFDRLDYVSMM NEQ +SLAVEKLLNI+ P RA+WIR LFGEITRILNH+M+V +HA+D+GA+TPF W FEEREK+ EFYERVSG Sbjct: 70 DVLKEKVVTNVTLNFGPQHPAAHGVLRLVLELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQPPPRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSG 219
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_PANTR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Pan troglodytes GN=NDUFS2 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.268e-63 Identity = 111/150 (74.00%), Postives = 133/150 (88.67%), Query Frame = 1 Query: 301 DSPEERKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 D P++ +++ T+NFGPQHPAAHGVLRL++EL+GE + + DPH+GLLHRGTEKLIEYKTYLQALPYFDRLDYVSMM NEQ +SLAVEKLLNI P RA+WIR LFGEITR+LNH+M+V +HA+D+GA+TPF W FEEREK+ EFYERVSG Sbjct: 70 DPPKDTIVKNMTLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYERVSG 219
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_HUMAN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Homo sapiens GN=NDUFS2 PE=1 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.268e-63 Identity = 111/150 (74.00%), Postives = 133/150 (88.67%), Query Frame = 1 Query: 301 DSPEERKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 D P++ +++ T+NFGPQHPAAHGVLRL++EL+GE + + DPH+GLLHRGTEKLIEYKTYLQALPYFDRLDYVSMM NEQ +SLAVEKLLNI P RA+WIR LFGEITR+LNH+M+V +HA+D+GA+TPF W FEEREK+ EFYERVSG Sbjct: 70 DPPKDTIVKNITLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYERVSG 219
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_GORGO (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS2 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.268e-63 Identity = 111/150 (74.00%), Postives = 133/150 (88.67%), Query Frame = 1 Query: 301 DSPEERKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 D P++ +++ T+NFGPQHPAAHGVLRL++EL+GE + + DPH+GLLHRGTEKLIEYKTYLQALPYFDRLDYVSMM NEQ +SLAVEKLLNI P RA+WIR LFGEITR+LNH+M+V +HA+D+GA+TPF W FEEREK+ EFYERVSG Sbjct: 70 DPPKDTIVKNMTLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYERVSG 219
BLAST of FC910039 vs. ExPASy Swiss-Prot
Match: NDUS2_ARATH (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Arabidopsis thaliana GN=NAD7 PE=1 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 2.162e-63 Identity = 113/146 (77.40%), Postives = 133/146 (91.10%), Query Frame = 1 Query: 313 ERKIRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTLFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSG 750 +R+I+++T+NFGPQHPAAHGVLRL+LE+NGE + RA+PH+GLLHRGTEKLIEYKTYLQALPYFDR DYVSMM E +SLAVEKLLN E+P RA++IR LF EITRILNHL+++ +HAMDVGALTPFLW FEEREKL+EFYERVSG Sbjct: 5 KRQIKNFTLNFGPQHPAAHGVLRLVLEMNGEVVERAEPHIGLLHRGTEKLIEYKTYLQALPYFDRSDYVSMMAQEHAYSLAVEKLLNCEVPLRAQYIRVLFCEITRILNHLLALTTHAMDVGALTPFLWAFEEREKLLEFYERVSG 150 The following BLAST results are available for this feature:
BLAST of FC910039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC910039 ID=FC910039; Name=FC910039; organism=Citrus clementina; type=EST; length=750bpback to top |