FC910041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC910041 vs. ExPASy Swiss-Prot
Match: TBC5B_DICDI (TBC1 domain family member 5 homolog B OS=Dictyostelium discoideum GN=tbc1d5B PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.692e-17 Identity = 51/170 (30.00%), Postives = 88/170 (51.76%), Query Frame = 2 Query: 332 LRGVQWRINLGILPSSYSSIEDLRRVTADSRRRYAEIRRHLLVDPHWHKDGSNSPDLVMDNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHEND 841 LRG+ W++ LG L + ++ R R+RY +++ DP SNS +PLSQN DS W +FF++ + +K++ DL R +P++ +F P + M+ IL ++ + YRQGMHELLAP++Y+ + + ++ D + + E+D Sbjct: 285 LRGIAWKLFLGGL--DINRVDKWERDITQQRKRYEKLKEEHCFDPR----NSNSTY----DPLSQNDDSPWNKFFKNLDTQKIIKIDLERTHPDN-DFFSNPVIREMMATILFVYSKTNGIISYRQGMHELLAPIIYLYNQEYSSYKKLDENSSSTLVDFIYNIKYLEHD 443
BLAST of FC910041 vs. ExPASy Swiss-Prot
Match: TBCD5_MOUSE (TBC1 domain family member 5 OS=Mus musculus GN=Tbc1d5 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.210e-17 Identity = 47/145 (32.41%), Postives = 82/145 (56.55%), Query Frame = 2 Query: 326 ANLRGVQWRINLGILPSSYSS-IEDLRRVTADSRRRYAEIRRHLLVDPHWHKDGSNSPDLVMDNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVD 757 + R + W++ L +LP S I ++ + R Y+ I+ + +P + + DL+++NPLSQ+ S W +FF+ EL M++QD+ R +PE +FQ + +L +L + + + Y+QGMHELLAP+++ LH D Sbjct: 84 SRFRSICWKLFLCVLPQDKSQWISKIKEL----RAWYSSIKEIHITNP---RKAAGQQDLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEM-QFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAPIIFTLHCD 220
BLAST of FC910041 vs. ExPASy Swiss-Prot
Match: TBCD5_HUMAN (TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.770e-17 Identity = 50/148 (33.78%), Postives = 82/148 (55.41%), Query Frame = 2 Query: 326 ANLRGVQWRINLGILPSSYSS----IEDLRRVTADSRRRYAEIRRHLLVDPHWHKDGSNSPDLVMDNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVD 757 + R + W++ L +LP S IE+LR Y+ I+ + +P + DL+++NPLSQ+ S W +FF+ EL M++QD+ R +PE +FQ + +L +L + + + Y+QGMHELLAP+++VLH D Sbjct: 84 SRFRSICWKLFLCVLPQDKSQWISRIEELRAW-------YSNIKEIHITNP---RKVVGQQDLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEM-QFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAPIVFVLHCD 220
BLAST of FC910041 vs. ExPASy Swiss-Prot
Match: TBC5A_DICDI (TBC1 domain family member 5 homolog A OS=Dictyostelium discoideum GN=tbc1d5A PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.444e-16 Identity = 53/186 (28.49%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 332 LRGVQWRINLGILPSSYSSIEDLRRVTADSRRRYAEIRRHLLVDPHWHKDGS--------------NSPDLVMDNPLSQNPDSTWGRFFRSAELEKMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPEFGYRQGMHELLAPLLYVLHVD----------VERLSQVRNEHEDHFTDKFD 817 +R + WRI LG L ++ + T SR++Y +++ +++P KD P ++D+PLSQ+ DS W +FF + ++ + D+SR YP G +F+ Q ++ RIL ++ ++P+ Y QGM+E+LAP+LY ++ D ++ +N+ +HF FD Sbjct: 379 VRSIFWRIALGTLSKDPTTWVER---TNSSRKKYETFKKNYIINPRNSKDQDADLQQQQQQQQQQQRKPVSLIDDPLSQSEDSLWNQFFDNENAQREISHDISRTYPGLG-FFERLDIQDIMIRILFIFSKQYPKIKYLQGMNEILAPILYSVYNDSHWFNNRDVFSKKNYDKKNKQYEHFDFVFD 560 The following BLAST results are available for this feature:
BLAST of FC910041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC910041 ID=FC910041; Name=FC910041; organism=Citrus clementina; type=EST; length=856bpback to top |