FC910044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC910044 vs. ExPASy Swiss-Prot
Match: IF41_WHEAT (Eukaryotic initiation factor iso-4F subunit p82-34 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 8.518e-66 Identity = 138/237 (58.23%), Postives = 167/237 (70.46%), Query Frame = 3 Query: 264 LPPHGGVASAF-KMGDLRFEGHERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQA------RYLEADNRDWRTRSTTSG-----QEKSLEANQEKMEFGAHEGQLNSQFASAQISTNQGA--GPAPALIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKL 932 L PHGG AS ++GDL E ERVRY+R+QLL L+++ +TE IL+++QEIE+E +G+ QSW N LQ+Q Q R+ E DNRDWR R+ +EKS + +E E G+ QF S++Q A GP PALIKA+VPWSARRGNLSEKDRVLKTVKGILNKLTPEKFD+LKGQL+DSGITT DILK VI LIF+KAV EPTFCPMYA LCS+LN+ L Sbjct: 40 LRPHGGGASGVSRIGDLHSESRERVRYSRDQLLDLRKITDVTEQILRLQQEIEAELNGDDQSWVRNDSNVQLQTQAQPQVQAQNRFTETDNRDWRARTEKPPAPAVQEEKSWDNIREVKEQYNASGRQQEQFNRQDQSSSQKAQVGPPPALIKADVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLLDSGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSELNDNL 276
BLAST of FC910044 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.955e-34 Identity = 88/215 (40.93%), Postives = 127/215 (59.07%), Query Frame = 3 Query: 324 HERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQARYLEADNRDWRTRSTTSGQEKSLEAN----QEKMEFGAHEGQLNSQFASAQISTNQG-------AGPAPA-LIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKL 932 H+R+ YTR+QLLQL + ++ +DILK Q+I E +GE + G AE +++Q+ R+ D+RDW + S + E+ N +E G + + N S+ ++ P + LIKAEVP S +RG +S KD VLKT+K ILN +P+ FD+ KGQLI++ I++ DILK VI LIF+K V EP FC YA LC+ LN+ L Sbjct: 235 HQRISYTRDQLLQLCQNVEVPKDILKFCQDINVELNGEDKISGFGAEKDHVQTPSYKRFDATDSRDWHSWSAQTNWEQKFWDNFSEAKEPYSLGWKQEKFNKPDQSSFHFDSKDQWLKFIKCTPCKSTLIKAEVPLSIQRGIISGKDEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDVINLIFEKVVAEPAFCSTYAQLCTYLNQNL 449
BLAST of FC910044 vs. ExPASy Swiss-Prot
Match: IF4G_DICDI (Eukaryotic translation initiation factor 4 gamma OS=Dictyostelium discoideum GN=eif4g PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.423e-12 Identity = 65/242 (26.86%), Postives = 108/242 (44.63%), Query Frame = 3 Query: 327 ERVRYTREQLLQLK--EVAQLTEDILKIKQEIES-----EFDGEGQSWGGRAENNNL-----------QSQFQARYLEADNRDWRTRSTTS---GQEKSLEAN------------QEKMEFGAHEGQLNSQFASAQIST---NQGAGPAPALIKA----EVPWSARRGN-LSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPD-ILKGVIELIFDKAVLEPTFCPMYALLCSDLNE 926 E++ Y++E ++ LK + + T + +K +IE+ + + G GG +N N+ Q +Y N + ++ + GQ++ + N Q++++ G L Q +T P I + E W + N L + +VL+ ILNK+TPEKFDVL +L++ GI + + KG I+LIFDKA+ E FC MY LC + E Sbjct: 593 EKIVYSKELMMSLKPKSMEEPTGPLKDLKNQIETNTNQNQLNRSGNKIGGNQQNKNMGMGGMNMNPNYPPQMNMKYPPQMNMKYPPKNYNNQVQGQQQQQQGNPNFNKYAPGYQYQQQIQQGMPPPTLQPNPYQPQQATYGITFSRDPVQPSISSQPVNEKRWVPTKVNALDDSQKVLRKANFILNKITPEKFDVLTEELLELGIVDDEKVHKGTIDLIFDKALNESKFCTMYTNLCKKIFE 834
BLAST of FC910044 vs. ExPASy Swiss-Prot
Match: IF4G2_RABIT (Eukaryotic translation initiation factor 4 gamma 2 OS=Oryctolagus cuniculus GN=EIF4G2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 696 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNE 926 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAE 141
BLAST of FC910044 vs. ExPASy Swiss-Prot
Match: IF4G2_PONAB (Eukaryotic translation initiation factor 4 gamma 2 OS=Pongo abelii GN=EIF4G2 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 696 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNE 926 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAE 141
BLAST of FC910044 vs. ExPASy Swiss-Prot
Match: IF4G2_MOUSE (Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus GN=Eif4g2 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 696 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNE 926 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAE 141
BLAST of FC910044 vs. ExPASy Swiss-Prot
Match: IF4G2_HUMAN (Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens GN=EIF4G2 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 696 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNE 926 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAE 141
BLAST of FC910044 vs. ExPASy Swiss-Prot
Match: IF4G2_BOVIN (Eukaryotic translation initiation factor 4 gamma 2 OS=Bos taurus GN=EIF4G2 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 696 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNE 926 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAE 141 The following BLAST results are available for this feature:
BLAST of FC910044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC910044 ID=FC910044; Name=FC910044; organism=Citrus clementina; type=EST; length=932bpback to top |