FC910660

Overview
NameFC910660
Unique NameFC910660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length905
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC910660 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.958e-57
Identity = 100/121 (82.64%), Postives = 112/121 (92.56%), Query Frame = 1 
Query:  541 RFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEATGFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDAFRPVL 903
            RFKTLP  E+LPRNE +GGYIFVCNNDTMQE+LKRQLFGLPPRYRDSVRAITPGLPLFLYNY+THQLHG+FEA  FGG+NIDPTAWEDKK +GESRFPAQVR+  RK+C+ LEED+FRP+L
Sbjct:   58 RFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPIL 178
The following BLAST results are available for this feature:
BLAST of FC910660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA6.958e-5782.64B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10AG09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA10AG09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910660 ID=FC910660; Name=FC910660; organism=Citrus clementina; type=EST; length=905bp
GTCTCGTGCGAATAGCAATAGCAGGGAGGTATCATCACAGACTTGACAGT
ATTGGCTGGCAAAGAAAAAAGGATTTGCAAGATGGACAACATGCATAGCT
TTTGGCAATTAGGTGATGAACTTCGAGGGCAATCAAGAACCTCTGAAGAT
CAATCATGGCTACGGGCTGCCTCAAGGTTGGCTGAGCAGACAAGGTTTAA
GGGCGAACGCATGAACAATCTTGATCTTTCAAAGGGTATGACAGAAATAA
GGCCGAGGGATAAAATCATGTATCATGAAGATAATAATTTTGAGAGCTTT
AACTTCAACTTCAACATGATGAATCTGGACAACAAAGTTGTTGAAAATGT
TACAAAAAGCTCCTTGAGGAATGGTATTTACAATATGAATTCAGTGTACC
AGAAAAACAGTGGGCACAATATGGGAAACCTGATGGTTAATAAGTATGGG
GGTAATAATCTCAGTGTTAAGGAGGCTGAAAACAACAACAATAACAACAA
CAACAACAATGATAGCAACGCAAACAGTGCGCTTGACAAAAGGTTCAAGA
CTTTGCCTGCAACAGAGACACTTCCGAGAAATGAGGTGCTAGGAGGGTAC
ATCTTTGTCTGCAACAACGACACAATGCAGGAAGATTTAAAACGCCAGCT
TTTTGGTTTACCTCCAAGATATAGGGATTCCGTCCGTGCTATAACACCAG
GCTTACCTCTTTTTCTCTACAACTATACTACTCACCAACTGCATGGAATA
TTTGAGGCAACTGGTTTTGGAGGCTCCAACATTGACCCAACAGCCTGGGA
GGACAAAAAGTGTAAAGGGGAATCAAGGTTTCCTGCTCAGGTAAGGATCC
GGGTAAGAAAACTGTGCAAGGCATTGGAAGAAGATGCTTTTAGGCCTGTC
TTGCA
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