FC917024

Overview
NameFC917024
Unique NameFC917024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length871
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917024 vs. ExPASy Swiss-Prot
Match: KPK1_PHAVU (Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.975e-45
Identity = 97/172 (56.40%), Postives = 117/172 (68.02%), Query Frame = 2
Query:  356 QPETSFYPSPSNSMYTTTMYTEAKQSFTNTEVSECRSSIGKSAESGEVSQSCDLVESTKTSMYRXXXXXXXXXXXXXXXXXXAVHKPHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 871
            QP+ +F  SP NS Y+ T+Y+EAK+SFTNTEVSEC +S+ KS ES EV+ S D  ES KTS+ R                   ++KPHKAND+RWEAIQAVR+  G L + HF+LLK+LGCGDIGSVYL+EL GT+T FAMKVM+             QTEREILQSLDHPF
Sbjct:  119 QPDATFCASPQNSFYSATVYSEAKESFTNTEVSEC-ASVDKSCES-EVANSSDFNESRKTSICRASTGSDASDESSTSSLSSVLYKPHKANDIRWEAIQAVRTRDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKVMNKTELANRKKLLRAQTEREILQSLDHPF 288          
BLAST of FC917024 vs. ExPASy Swiss-Prot
Match: KPK7_ARATH (Putative serine/threonine-protein kinase PK7 OS=Arabidopsis thaliana GN=PK7 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.742e-28
Identity = 83/174 (47.70%), Postives = 97/174 (55.75%), Query Frame = 2
Query:  356 QPETSFYPSPSNSMYTTTMYTEAKQSFTNTEVSECRSSIGKSAESGEVSQSCDLVESTKTSMYRXXXXXXXXXXXXXXXXXXAVHKPHKAN-DVRWEAIQAVRSHMGS-LGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 871
            Q E  FY SP+N     T YTEAKQSFTNTE SEC +SI      G      DL E     +YR                  A +KPH+ N D RW AIQ VRS +GS L    FKL+K+LG GDIG+VYL+EL+GT   FA+KVM+             QTE+EILQSLDHPF
Sbjct:   80 QSEPRFYSSPTN-----TFYTEAKQSFTNTEFSEC-ASISTIGIGG-----IDL-EKNGVMIYRGSIGSDVSDESSSSGLSNAAYKPHRDNNDKRWVAIQEVRSRVGSSLEAKDFKLIKKLGGGDIGNVYLAELIGTGVSFAVKVMEKAAIAARKKLVRAQTEKEILQSLDHPF 241          
BLAST of FC917024 vs. ExPASy Swiss-Prot
Match: G11A_ORYSJ (Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.383e-28
Identity = 61/90 (67.78%), Postives = 69/90 (76.67%), Query Frame = 2
Query:  602 AVHKPHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 871
            +V KPHKAND RWEAIQ +R+  G LGL+HFKLLK+LGCGDIGSVYLSEL GTK++FAMKVMD             QTE+EILQ LDHPF
Sbjct:  165 SVTKPHKANDSRWEAIQMIRTRDGILGLSHFKLLKKLGCGDIGSVYLSELSGTKSYFAMKVMDKASLASRKKLLRAQTEKEILQCLDHPF 254          
BLAST of FC917024 vs. ExPASy Swiss-Prot
Match: G11A_ORYSI (Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.336e-28
Identity = 61/90 (67.78%), Postives = 69/90 (76.67%), Query Frame = 2
Query:  602 AVHKPHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 871
            +V KPHKAND RWEAIQ +R+  G LGL+HFKLLK+LGCGDIGSVYLSEL GTK++FAMKVMD             QTE+EILQ LDHPF
Sbjct:  165 SVTKPHKANDSRWEAIQMIRTRDGILGLSHFKLLKKLGCGDIGSVYLSELNGTKSYFAMKVMDKASLASRKKLLRAQTEKEILQCLDHPF 254          
BLAST of FC917024 vs. ExPASy Swiss-Prot
Match: PHOT1_ARATH (Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14
Identity = 42/87 (48.28%), Postives = 49/87 (56.32%), Query Frame = 2
Query:  611 KPHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 871
            KPH+ +   W AIQ V      +GL HFK +K LG GD GSV+L EL+GT   FAMK MD             + EREIL  LDHPF
Sbjct:  636 KPHRKDSPPWIAIQKVLESGEPIGLKHFKPVKPLGSGDTGSVHLVELVGTDQLFAMKAMDKAVMLNRNKVHRARAEREILDLLDHPF 722          
BLAST of FC917024 vs. ExPASy Swiss-Prot
Match: PHOT2_ARATH (Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12
Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 2
Query:  614 PHKANDVRWEAIQAVRSHMGSLGLNHFKLLKRLGCGDIGSVYLSELMGTKTHFAMKVMDXXXXXXXXXXXXXQTEREILQSLDHPF 871
            PH      W+AI+ +++   ++GL+HFK +K LG GD GSV+L EL GT   +AMK M+               EREI+  LDHPF
Sbjct:  551 PHNKESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGSVHLVELKGTGELYAMKAMEKTMMLNRNKAHRACIEREIISLLDHPF 636          
The following BLAST results are available for this feature:
BLAST of FC917024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
KPK1_PHAVU1.975e-4556.40Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 S... [more]
KPK7_ARATH3.742e-2847.70Putative serine/threonine-protein kinase PK7 OS=Ar... [more]
G11A_ORYSJ6.383e-2867.78Protein kinase G11A OS=Oryza sativa subsp. japonic... [more]
G11A_ORYSI8.336e-2867.78Protein kinase G11A OS=Oryza sativa subsp. indica ... [more]
PHOT1_ARATH8.948e-1448.28Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=... [more]
PHOT2_ARATH6.413e-1241.86Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ12YB19RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ12YB19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917024 ID=FC917024; Name=FC917024; organism=Citrus clementina; type=EST; length=871bp
CTCGTATGCAAGTGCCGAAAATCGTGGTATGAAGTCGATCTGCAATGTAA
ATGGCTCTGTAATCAATCAAAAGAACATCCAGAGAATAGCCCAAGATCAT
AAGCAGCATGAGGAGTTAGCAACTACTGCAAAAACCTTCTATGATTTGAA
TAAGGGGAAACTCGAATATGTGGGCACAGTTAATGCTCTTGATAAAACTG
TGGAAACTTCTTTCCAGAAAATGGTGTTGACGGTGGAAAGTGAATCCTGT
GATAAGCATCCGGTTTATGTTCCTGAGAATTGCAACTCAAGCAGCTCATT
AGAATCTGAAAATATTGTCTCAGGTCTTGGGCAATTGGGGCACAACTTAG
TGCCTCAACCAGAAACAAGCTTTTATCCAAGTCCTTCAAATAGTATGTAT
ACTACTACTATGTATACAGAAGCCAAACAAAGTTTCACCAACACAGAAGT
TAGTGAGTGTAGAAGTAGCATAGGGAAGTCTGCTGAAAGTGGTGAAGTGA
GTCAGTCGTGTGATCTTGTTGAGAGCACAAAGACAAGTATGTATAGGGGC
AGCACTGGAAGTGATGTTAGCGATGAAAGCAGCTCCAGTAGTTTCGGCAG
TGCTGTTCACAAACCCCATAAGGCAAATGATGTAAGATGGGAAGCAATTC
AAGCCGTCCGATCTCATATGGGGTCATTAGGTTTGAATCACTTCAAATTG
TTGAAGAGGCTAGGGTGTGGAGATATAGGCAGTGTATATCTATCAGAGTT
GATGGGCACTAAAACTCATTTTGCCATGAAAGTTATGGATAAAGCTGCTT
TGGCAAGTAGGAAGAAGCTTCTGAGAGCTCAGACAGAGAGAGAAATACTG
CAATCTCTGGATCATCCGTTT
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