FC917079

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: RPB3A_ARATH (DNA-directed RNA polymerase II subunit RPB3-A OS=Arabidopsis thaliana GN=RPB36A PE=2 SV=1)

HSP 1 Score: 479.945 bits (1234), Expect = 8.131e-135
Identity = 240/297 (80.81%), Postives = 269/297 (90.57%), Query Frame = 2

Query:    2 ASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTGKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKLDAVRLSE 892
            A+YQRFPK+KIRELKDDYAKFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEF L +KC +DQTLDVT +DLYS+D +V PVDF   +    + + +GIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP+I INED+M++LS EEK   +ESSPTKVF +DP T QV VVD EAYTYD+EVIKKAEAMGKPGL+EI  K+DSFIFTVESTGA+KASQLVLNAI++L+QKLDAVRLS+
Sbjct:    4 ATYQRFPKIKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDVTSRDLYSADPTVTPVDFTIDSSVSDSSEHKGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAATVTFMYEPDIIINEDMMDTLSDEEKIDLIESSPTKVFGMDPVTRQVVVVDPEAYTYDEEVIKKAEAMGKPGLIEISPKDDSFIFTVESTGAVKASQLVLNAIDLLKQKLDAVRLSD 300          

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: RPB3B_ARATH (DNA-directed RNA polymerase II subunit RPB3-B OS=Arabidopsis thaliana GN=RPB36B PE=1 SV=2)

HSP 1 Score: 449.129 bits (1154), Expect = 1.537e-125
Identity = 223/296 (75.34%), Postives = 259/296 (87.50%), Query Frame = 2

Query:    5 SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTGKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKLDAVRLSE 892
            +YQRFP VKIRELKDDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD  CEFCSVEF L AKC +DQTLDVT +DLYS+D +V PVDF   +    + + +GIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP+I INE++M +L+ EEK   +ESSPTKVF IDP TGQV VVD EAYTYD+EVIKKAEAMGKPGL+EI+ K DSF+FTVESTGA+KASQLVLNAI++L+QKLDA+RLS+
Sbjct:    5 TYQRFPTVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTMAIHLVKIEVNSSVLNDEFIAQRLSLIPLTSERAMSMRFCQDCEDCNGDEHCEFCSVEFPLSAKCVTDQTLDVTSRDLYSADPTVTPVDFTSNSSTSDSSEHKGIIIAKLRRGQELKLKALARKGIGKDHAKWSPAATVTYMYEPDIIINEEMMNTLTDEEKIDLIESSPTKVFGIDPVTGQVVVVDPEAYTYDEEVIKKAEAMGKPGLIEIHPKHDSFVFTVESTGALKASQLVLNAIDILKQKLDAIRLSD 300          

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: RPB3_DICDI (DNA-directed RNA polymerase II subunit rpb3 OS=Dictyostelium discoideum GN=polr2c PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 9.784e-72
Identity = 143/292 (48.97%), Postives = 201/292 (68.84%), Query Frame = 2

Query:   14 RFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTGKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDP--NTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKLDAVR 883
            R P+++I E+K+D   F L +TD S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL S+      ++RDC   D   +C+ CSVE  L  KC  ++  DVT  DL S + +V+PV     +   S++ ++ I IVKLRRGQE++LRAIA+KG+GK+HAKWSP+   T+ ++P I +N++ ++ L+ ++K+ WV S PTKV+   P  +T QV + D     Y  E  KKAE+ GKP LV +  K+D FIFTVES+GA+K   +VL AI+++++KL  ++
Sbjct:   10 RQPELEILEIKNDSIIFILSNTDISVANALRRVMIAEVPTMCIDLVEFESNNSVLCDEFIAHRLGLIPLVSDNIDKFCYTRDCSCSD---RCDQCSVELRLNVKCTENRPRDVTSSDLLSQNSAVIPVS----SQVTSSNSEQEIPIVKLRRGQEIKLRAIAKKGVGKEHAKWSPSCVATYQFQPIIVLNQNRIDELTDQQKEEWVGSCPTKVYSYSPHQSTQQVTIEDPLRCVYCLECKKKAESFGKPDLVHLEQKQDKFIFTVESSGALKPEDIVLYAIQIIKRKLTDIQ 294          

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: RPB3_BOVIN (DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus GN=POLR2C PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.053e-49
Identity = 122/293 (41.64%), Postives = 170/293 (58.02%), Query Frame = 2

Query:    8 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTGKDLYSSDHSVVPVDF----VDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKL 871
            Y   P V+I EL D+  KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+  +  +++SRDC     +  C  CSVEF L  +C+ DQT  VT +DL S+   V+PV       DP  Y   D    I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P     ++ +      + + W +S  +++ +           D     YD          GKP         + F + VES G+++   +VL+A+  L++KL
Sbjct:    3 YANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTC---EEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDD---ILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDP-----DNALRHTVYPKPEEWPKSEYSELDE-----------DESQAPYDPN--------GKP---------ERFYYNVESCGSLRPETIVLSALSGLKKKL 256          

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: RPB3_HUMAN (DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens GN=POLR2C PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 5.224e-49
Identity = 121/293 (41.30%), Postives = 169/293 (57.68%), Query Frame = 2

Query:    8 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTGKDLYSSDHSVVPVDF----VDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKL 871
            Y   P V+I EL D+  KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPL S+  +  +++SRDC     +  C  CSVEF L  +C+ DQT  VT +DL S+   V+PV       DP  Y   D    I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P     ++ +      + + W +S  +++ +           D     YD          GKP         + F + VES G+++   +VL+A+  L++KL
Sbjct:    3 YANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLISDDIVDKLQYSRDCTC---EEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDD---ILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDP-----DNALRHTVYPKPEEWPKSEYSELDE-----------DESQAPYDPN--------GKP---------ERFYYNVESCGSLRPETIVLSALSGLKKKL 256          

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: CNJC_TETTH (Conjugation stage-specific protein OS=Tetrahymena thermophila GN=CNJC PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.224e-49
Identity = 111/294 (37.76%), Postives = 178/294 (60.54%), Query Frame = 2

Query:   23 KVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTGKDL-----YSSDHSVVPVDFVDPAGYD-STDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDE-VIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKLDAVR 883
            K+ +  L++   +F L + D S+AN+LRR+++AE+ TIAI  V++  N+S L DE+IAHRLGLIPL S +     +  +C+     G+C+ C++ F LR    +++ L+VT  DL     ++ + +V P+        +    ++ GI I+KL +GQ++     A+KGIGK H+KW+P    TF  EPEI  ++++ ++L +E+K++ V + PTKVF I+P+T  + V D     Y +E V K AE   KP L++I  K+D F F VE+TG +K  +++      LRQKLD +R
Sbjct:    5 KLTLTNLEEFKCEFTLENCDISLANSLRRILLAEIETIAIHNVKVYENTSSLPDEYIAHRLGLIPLNSAKVDDYNYIWNCNC---QGECDRCTIHFDLRVSNFTNEVLEVTSLDLKQRQDHTDEDAVRPIKVYSILRDEYGNKREVGIPIIKLSKGQQIHFECEAQKGIGKMHSKWNPVCISTFSVEPEIIFDQEI-QNLDIEQKKALVNACPTKVFGINPHTNTLEVQDHMKCMYCEECVYKCAEDFQKPKLIKIDHKKDKFFFKVETTGVMKPVEVLRRGFSTLRQKLDFMR 294          

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: RPB3_MOUSE (DNA-directed RNA polymerase II subunit RPB3 OS=Mus musculus GN=Polr2c PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.061e-46
Identity = 117/293 (39.93%), Postives = 162/293 (55.29%), Query Frame = 2

Query:    8 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTGKDLYSSDHSVVPVDF----VDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKL 871
            Y   P V+I EL ++  KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+  +  +++SRDC     +  C  CSVEF L  +C+ DQT  VT +DL S+   V+PV       DP  Y   D    I+IVKLR+GQELRLRA  +K  GK+HAKW+P A V F Y+P+  +   +        K  + E                          +DE     +  GKP         + F + VES G+++   + L+A+  L++KL
Sbjct:    3 YANQPTVRITELTEENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDGNSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTC---EEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDD---ILIVKLRKGQELRLRAYVKKRSGKEHAKWNPTAGVAFEYDPDNGLRHTVYPKPEEGPKSEYSELD------------------------EDESQAPYDPNGKP---------ERFYYNVESCGSLRPETIGLSALSGLKKKL 256          

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: RPB3_YEAST (DNA-directed RNA polymerase II subunit RPB3 OS=Saccharomyces cerevisiae GN=RPB3 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 2.511e-43
Identity = 113/292 (38.70%), Postives = 163/292 (55.82%), Query Frame = 2

Query:   20 PKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTGKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP--EIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKLDAVRLS 889
            P+VKIRE   D   F L + D +MAN+LRRVMIAE+PT+AID VE+E N++VL DEFIAHRLGLIPL S     + +SRDC   D    C+ CSV   L+A   S+ T +V  KDL     +++  +   P   D   +  G++I KLR+GQEL+L  +A+KGI K+HAKW PAA + F Y+P  ++   +   E  S +E   W +S   + ++  PN G  +   A+A                          D+F   VES G+I   Q+V+  I+ L++K+ ++ L+
Sbjct:    6 PQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCED---HCDKCSVVLTLQAFGESESTTNVYSKDLVIVS-NLMGRNIGHPIIQDK--EGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKE---WPQSKNCE-YEDPPNEGDPFDYKAQA--------------------------DTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLA 261          

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: RPB3_SCHPO (DNA-directed RNA polymerase II subunit RPB3 OS=Schizosaccharomyces pombe GN=rpb3 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 8.360e-39
Identity = 102/288 (35.42%), Postives = 154/288 (53.47%), Query Frame = 2

Query:   26 VKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSER-----AMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTGKDL-YSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKL 871
            + IR +  +   F L +T  ++AN+LRRV++AE+PT+AIDLVEI VN+SV+ DEF+AHRLG+IPL S        + + ++R+CD    D  C  CSVE  L AKC  + T+++  +DL  SS+ S+      DP       + RG +I KLR+ QE+ LR IA+KGI K+HAKWSP + V F Y+P             L+    W E+                  DAE     +   ++    G+P       +   F   VES G+I  +++++  + +L++KL
Sbjct:    7 ITIRNISKNSVDFVLTNTSLAVANSLRRVVLAEIPTVAIDLVEINVNTSVMPDEFLAHRLGMIPLDSSNIDEPPPVGLEYTRNCDC---DQYCPKCSVELFLNAKCTGEGTMEIYARDLVVSSNSSLGHPILADP-------KSRGPLICKLRKEQEISLRCIAKKGIAKEHAKWSPTSAVAFEYDP----------WNKLQHTDYWFEND----------------ADAEWPKSKNADWEEPPREGEP--FNFQEEPRRFYMDVESVGSIPPNEIMVQGLRILQEKL 256          

BLAST of FC917079 vs. ExPASy Swiss-Prot
Match: RPOD_METST (DNA-directed RNA polymerase subunit D OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpoD PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.443e-32
Identity = 89/286 (31.12%), Postives = 149/286 (52.10%), Query Frame = 2

Query:   26 VKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC-HSDQTLDVTGKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLRQKLDAV 880
            ++IRE  D+ A F +   D +  N +RR+ + E+PT+AI+ V I  N + + DE +AHRLGLIP+ ++    +  S     CD +  C+ C V F L+ KC   + +  V  KDL S D +V PV       YD+      I IV+LR G+E+ L AIA  G+G +HAKW    T  + Y P+I I+ + +  L     + +VE  P  V  I+ +T  V  ++  +     + + + +       + +  +E  +IF +E+ G++K   ++  A ++L +K D +
Sbjct:    3 IEIREKDDERAVFVVEGVDDTFINTIRRICLVEIPTLAIEDVNIYKNDAKMFDEVLAHRLGLIPIVTDLDSYVMPSE----CDCESGCQHCRVSFLLKEKCEEGNDSKIVYSKDLKSDDPAVKPV-------YDT------IPIVRLREGEEVELEAIAELGLGSEHAKWQATTTCGYKYYPKIEIDTEKVNDL-----EEYVEECPRNVLQIEDDTLVVGNIENCSTCRTCQRLSEKD----DNAIVVDFEESKYIFKIETDGSLKPFDVLTIACDILSEKADNI 262