FC917080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_CRYNE (ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans GN=HAS1 PE=3 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.635e-69 Identity = 130/166 (78.31%), Postives = 153/166 (92.17%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 +LNLS T +AI+ +GF +MTEVQARTIPPLL+G+DVLGAARTGSGKT+AFLIPS+E+LSTL+FKP NGTG+II++PTRELALQIF + ++LM G HSQT GV+MGGANRK+EAD+L KGVNLIVATPGRLLDHL+NTK FVF+NLKALVIDEADRILE+GFEEEM Sbjct: 133 TLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVELLSTLRFKPVNGTGVIIISPTRELALQIFGVAKELMQG-HSQTFGVLMGGANRKAEADKLVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEEM 297
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_ASHGO (ATP-dependent RNA helicase HAS1 OS=Ashbya gossypii GN=HAS1 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 4.970e-68 Identity = 126/165 (76.36%), Postives = 151/165 (91.52%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 LNLSSQT AI +GFT MT+VQARTIPPL++GRDVLGAA+TGSGKTLAFL+P+IE+L +LKFKP NGTG+I++TPTRELALQIF + R+LM FHSQT G+V+GGANR+ EA++LAKGVNL++ATPGRLLDHL+NTK FVF+NLKALVIDEADRILE+GFE+EM Sbjct: 44 LNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKFKPRNGTGVIVITPTRELALQIFGVARELM-EFHSQTFGIVIGGANRRQEAEKLAKGVNLLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEM 207
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_CANGA (ATP-dependent RNA helicase HAS1 OS=Candida glabrata GN=HAS1 PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 4.207e-67 Identity = 125/166 (75.30%), Postives = 150/166 (90.36%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 SLNLS T AI+ +GF+ MT VQARTIPPL++GRDVLGAA+TGSGKTLAFL+P+IE+L +LKFKP NGTG+II+TPTRELALQIF +VR+LM FHSQT G+V+GGANR+ EA++L KGVNL+VATPGRLLDHL+NTK F+F+NLKALVIDEADRILE+GFE+EM Sbjct: 33 SLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTIELLHSLKFKPRNGTGVIIITPTRELALQIFGVVRELM-EFHSQTFGIVIGGANRRQEAEKLMKGVNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEM 197
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_YEAST (ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae GN=HAS1 PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.561e-66 Identity = 123/165 (74.55%), Postives = 148/165 (89.70%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L LS T AI+ +GFT+MT VQARTIPPLL+GRDVLGAA+TGSGKTLAFLIP+IE+L +LKFKP NGTGII++TPTRELALQIF + R+LM FHSQT G+V+GGANR+ EA++L KGVN+++ATPGRLLDHL+NTK FVF+NLKAL+IDEADRILE+GFE+EM Sbjct: 47 LKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELM-EFHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEM 210
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_KLULA (ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis GN=HAS1 PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.938e-65 Identity = 121/165 (73.33%), Postives = 145/165 (87.88%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L LS T AI +GFT MT VQ RTIPPLL+G+DVLGAA+TGSGKTLAFLIP+IE+L +LKFKP NGTG+I++TPTRELALQIF + R+LM FHSQT G+V+GGANR+ EAD+L KGVN+++ATPGRLLDHL+NTK F+F+NLKALVIDEADRILE+GFE+EM Sbjct: 39 LKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSLKFKPRNGTGVIVITPTRELALQIFGVARELM-EFHSQTFGIVIGGANRRQEADKLMKGVNILIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEM 202
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_PHANO (ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum GN=HAS1 PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 4.354e-64 Identity = 118/165 (71.52%), Postives = 148/165 (89.70%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 LNLS +T AI +GF SMTE+Q + IPPLLSG+DVLGAA+TGSGKTLAFLIP+IE+LS+++FKP NGTG+I+++PTRELALQIF + R+LM HSQT G+V+GGANR++EA++LAKGVNL++ATPGRLLDHL NT+ FVF+NLK+L+IDEADRILEVGFE+EM Sbjct: 136 LNLSERTMEAIKTMGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSSMRFKPRNGTGVIVVSPTRELALQIFGVARELMEK-HSQTFGIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEM 299
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_USTMA (ATP-dependent RNA helicase HAS1 OS=Ustilago maydis GN=HAS1 PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.686e-64 Identity = 121/165 (73.33%), Postives = 145/165 (87.88%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L+LS T+ AIDA+GF +MTEVQAR IPPL++G+DVLGAA+TGSGKTL+FLIP+IE+L LKFKP NGTG II++PTRELALQIF + ++LM H QT G++MGGANR++EAD+L KGVNLIVATPGRLLDHL+NTK FVF NLKAL IDEADRILE+GFE+EM Sbjct: 55 LDLSEPTRKAIDAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRLKFKPRNGTGAIIISPTRELALQIFGVAKELM-AHHHQTFGIIMGGANRRAEADKLQKGVNLIVATPGRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEM 218
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_PICGU (ATP-dependent RNA helicase HAS1 OS=Pichia guilliermondii GN=HAS1 PE=3 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 7.426e-64 Identity = 120/165 (72.73%), Postives = 144/165 (87.27%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L LS T AI +GF MT+VQ +TIPPLL+GRDVLGAA+TGSGKTLAFLIP+IE+L +LKFKP NGTG+I+++PTRELALQIF + RDLM HSQT G+V+GGANR+ EAD+L KGVNL++ATPGRLLDHL+NTK F+F+NLKALVIDEADRILE+GFE+EM Sbjct: 110 LGLSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSLKFKPRNGTGVIVVSPTRELALQIFGVARDLM-AHHSQTLGIVIGGANRRQEADKLMKGVNLLIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEM 273
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_PICST (ATP-dependent RNA helicase HAS1 OS=Pichia stipitis GN=HAS1 PE=3 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 2.822e-63 Identity = 118/163 (72.39%), Postives = 146/163 (89.57%), Query Frame = 1 Query: 397 LSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 LS T AI +GF +MT+VQA+TIPPLL+G+DVLGAA+TGSGKTLAFLIP+IE+L +LKFKP NGTG+I+++PTRELALQIF + R+LM H+QT G+V+GGANR+ EA++LAKGVNL++ATPGRLLDHL+NT+ FVF+NLKALVIDEADRILE+GFEEEM Sbjct: 110 LSEPTMRAISDMGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLYSLKFKPRNGTGVIVVSPTRELALQIFGVARELM-AHHTQTFGIVIGGANRRQEAEKLAKGVNLLIATPGRLLDHLQNTQGFVFKNLKALVIDEADRILEIGFEEEM 271
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_COCIM (ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis GN=HAS1 PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.822e-63 Identity = 117/165 (70.91%), Postives = 146/165 (88.48%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 LNLS +T AI +GF +MTE+Q R IPPL++GRDVLGAA+TGSGKTL+FLIP++E+LS L+FKP NGTG+I+++PTRELALQIF + R+LM HSQT G+V+GGANR++EA++L KGVNL++ATPGRLLDHL+NT FVF+NLKALVIDEADRILEVGFE+EM Sbjct: 129 LNLSEKTLKAIQEMGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELM-AHHSQTYGIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTDGFVFKNLKALVIDEADRILEVGFEDEM 292 The following BLAST results are available for this feature:
BLAST of FC917080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917080 ID=FC917080; Name=FC917080; organism=Citrus clementina; type=EST; length=886bpback to top |