FC917617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917617 vs. ExPASy Swiss-Prot
Match: GL8D1_MOUSE (Glycosyltransferase 8 domain-containing protein 1 OS=Mus musculus GN=Glt8d1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.409e-12 Identity = 72/310 (23.23%), Postives = 124/310 (40.00%), Query Frame = 3 Query: 42 MPLRQCLFILWLIALVLGLXXXXXXXXXISQRFKEAPQFYNSPDCPSISSIEFELDEGEEHIFCSDEAVHVAMTLDSAYIRGSMAAILSVLQHSSCPQNIAFHFVTSAKANASLLRATIST-SFPYLKFRVHPFDDSSVSGLISTSIRSALDC-PLNYARSYLANLLPLCVRRXXXXXXXXXXXXXIAKLAATDLGNSSVLAAPEYCNANFT-----------SYFTPTFWSNHALSLTFANRKACYFNTGVMVIDLDRWRAGDYTTKIEEWMELQKRMRIYE---LGSL--PPFLLVFAGNIAAVDHRW 917 M R+ I+W++A+VL L +S K + + I+F + + E + V + + G++AAI SV H + N+ F+ VT + A LR+ +++ S +++++ FD + G + PL +AR YL L+P ++ I L T L A E C++ T +Y + + C FN GV V +L W+ + T ++E+WM+L +Y GS+ PP L+VF + +D W Sbjct: 1 MSFRKVNIIIWVLAVVLFLLVLHHNFLSLSSLLKND---ISDSGIVGLQPIDFVASAHQHPVSERQEEIPVVIAASEDRLGGTIAAINSV--HQNTRSNVMFYIVTF-NSTADHLRSWLNSGSLKSIRYKIVNFDTKLLEGKVKQDPDQGESMKPLTFARFYLPILVP-SAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVIIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNVTNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMW 303
BLAST of FC917617 vs. ExPASy Swiss-Prot
Match: GL8D1_RAT (Glycosyltransferase 8 domain-containing protein 1 OS=Rattus norvegicus GN=Glt8d1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.154e-12 Identity = 68/309 (22.01%), Postives = 119/309 (38.51%), Query Frame = 3 Query: 42 MPLRQCLFILWLIALVLGLXXXXXXXXXISQRFKEAPQFYNSPDCPSISSIEFELDEGEEHIFCSDEAVHVAMTLDSAYIRGSMAAILSVLQHSSCPQNIAFHFVTSAKANASLLRATISTSFPYLKFRVHPFDDSSVSGLISTSIRSALDC-PLNYARSYLANLLPLCVRRXXXXXXXXXXXXXIAKLAATDLGNSSVLAAPEYCNANFT-----------SYFTPTFWSNHALSLTFANRKACYFNTGVMVIDLDRWRAGDYTTKIEEWMELQKRMRIYE---LGSL--PPFLLVFAGNIAAVDHRW 917 M R+ I+W +A++L L +S + + + I+F + + + E + V + + G++AAI S+ H + N+ F+ VT + L S S +++++ FD + G + PL +AR YL L+P ++ I L T L A E C++ T +Y + + C FN GV V +L W+ + T ++E+WM+L +Y GS+ PP L+VF + +D W Sbjct: 1 MSFRKVTIIIWALAVILFLLALHHNFLSLSSLLRND---VSDSGIVGLQPIDFTANFHQHPVNERQEEIPVVIAASEDRLGGTIAAINSI--HQNTRSNVIFYIVTFNRTADHLRSWLNSGSLKSIRYKIVNFDTKLLEGKVKEDPDQGESMKPLTFARFYLPILVP-SAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVMIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNVTNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMW 303
BLAST of FC917617 vs. ExPASy Swiss-Prot
Match: GL8D1_DANRE (Glycosyltransferase 8 domain-containing protein 1 OS=Danio rerio GN=glt8d1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11 Identity = 62/245 (25.31%), Postives = 103/245 (42.04%), Query Frame = 3 Query: 234 SDEAVHVAMTLDSAYIRGSMAAILSVLQHSSCPQNIAFHFVTSAKANASLLRATISTSFPYLKFRVHPFDDSSVSGLISTSIRSALDC-PLNYARSYLANLLPLCVRRXXXXXXXXXXXXXIAKLAATDLGNSSVLAAPEYCNA-----------NFTSYFTPTFWSNHALSLTFANRKACYFNTGVMVIDLDRWRAGDYTTKIEEWMELQKRMRIY-----ELGSLPPFLLVFAGNIAAVDHRW 917 S E + V +T + ++ A+ S+ ++S N+ F+ VT N S++ + S LK ++ FD S + G I T + PL +AR Y+ LP + I +L T L + V A E C++ N SY + A+ C FN GV V +L W+ + T+++E WME + +Y + + PP L+VF + + +D W Sbjct: 61 SGEEIPVLITAPEERLGAAVTAMNSIYRNSKA--NVVFNIVT---LNESVVHLSTWLSKTDLKHKIIVFDPSILLGKIPTDAQKMETVRPLTFARFYMPAFLP-DAEKAIYLDDDVIVQGDIRELFNTSLKSGHVAAFSEDCDSASSKGIVRGAGNQNSYIGYLDFKKEAIKKLGMRANTCSFNPGVFVANLTEWKQQNVTSQLEFWMERNAKEDLYSKTLADCMTTPPMLIVFYKHHSNIDPMW 299 The following BLAST results are available for this feature:
BLAST of FC917617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917617 ID=FC917617; Name=FC917617; organism=Citrus clementina; type=EST; length=926bpback to top |