FC917637

Overview
NameFC917637
Unique NameFC917637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length940
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 2.116e-88
Identity = 156/235 (66.38%), Postives = 190/235 (80.85%), Query Frame = 1
Query:  235 SRLLILFISGLLSHVKIGTSIGINYGQIANNLPTPENVIPLVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGNEYLAKMRDPDCAKTWIKSNVQAYLPATKITCINVGNEVLTFNDTSLSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLGSSYPPSAGAFRKDLVDCITPILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLFSANQGIVDPASNLHYDNMLFA 939
            S LL L    L+      TSIG+NYGQI +NLP+P +VIPL+KSIGAT+VKLYDA+P++LKAF+NTG+EF + LGNEYL+KM+DP  A TWIK NV  +LPAT ITCI +GNE+L  ND+SL+  LLPAM+ VH+AL+  GL  Q+SVTTAHSL +L SS+PPSAG F+ DL+D +TPIL+FH KT SPFLINAYP+FAYKG+PK+V LDFVLF  NQGIVDPA+  HYDNMLFA
Sbjct:    9 SSLLFLISLTLIILPTTTTSIGVNYGQIGDNLPSPTDVIPLIKSIGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYLSKMKDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTTAHSLSILKSSFPPSAGEFQPDLLDSLTPILEFHRKTDSPFLINAYPFFAYKGNPKEVPLDFVLFQPNQGIVDPATGFHYDNMLFA 243          
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 4.412e-86
Identity = 157/236 (66.53%), Postives = 186/236 (78.81%), Query Frame = 1
Query:  232 LSRLLILFISGLLSHVKIGTSIGINYGQIANNLPTPENVIPLVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGNEYLAKMRDPDCAKTWIKSNVQAYLPATKITCINVGNEVLTFNDTSLSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLGSSYPPSAGAFRKDLVDCITPILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLFSANQGIVDPASNLHYDNMLFA 939
            L  L  LF   L S   I +SIGINYGQ+ANNLP P+NVIPL+KS+GAT+VKLYDADP+ L+AFA +G E TV+LGNEYLA+M DP  A+ W+K NVQAYLP TKI  I VGNEVLT N ++L+  L PAM+S+H ALV+ GL+KQ+ VTTAHSL +L  SYPPSA +FR+DL+  +TPILDFHVKT SP LINAYP+FAY+ +PK VSLDFVLF  NQG  DP SN HYDNMLFA
Sbjct:    6 LQSLFSLFCLALFSLPLIVSSIGINYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQALRAFAGSGFELTVALGNEYLAQMSDPIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTTAHSLAILDVSYPPSATSFRRDLLGSLTPILDFHVKTGSPILINAYPFFAYEENPKHVSLDFVLFQPNQGFTDPGSNFHYDNMLFA 241          
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 1.378e-71
Identity = 132/235 (56.17%), Postives = 176/235 (74.89%), Query Frame = 1
Query:  238 RLLILFISGLLSHVKIGTSIGINYGQIANNLPTPENVIPLVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGNEYLAKMR-DPDCAKTWIKSNVQAYLPATKITCINVGNEVLTFNDTSLSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLGSSYPPSAGAFRKDLVDCITPILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLFSANQGIVDPASNLHYDNMLFA 939
            R+L+L    L   +K G  +GINYGQIANNLP+P  V  L++S+  TRVKLYDADP VL +F+N+ V+F + LGNEYL  M  DP  A+ W++  ++ ++  T+IT I VGNE+   ND  L   LLPAM+SV+ AL NLGL+KQV+VT+AHSL +L +SYPPS+G+F+++ +  + P+LDFH +  SPFLINAYP+FAYK SPK+V L++VLF  NQG+VDP +NLHYDNMLFA
Sbjct:   11 RVLLLLFLTLSERIK-GQGVGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQVTVTSAHSLDILSTSYPPSSGSFKEEFIQYLQPLLDFHSQIESPFLINAYPFFAYKDSPKEVPLEYVLFQPNQGMVDPNTNLHYDNMLFA 244          
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.091e-47
Identity = 100/243 (41.15%), Postives = 158/243 (65.02%), Query Frame = 1
Query:  220 MVMELSRLLILFISGLLSHVKIG--TSIGINYGQIANNLPTPENVIPLVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGN-EYLAKMRDPDCAKTWIKSNVQAYLPATKITCINVGNEVLTFNDTSLSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLGSSYPPSAGAFRKDLVDCITPILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLFSANQGIVDPASNLHYDNMLFA 939
            M   L+ +  +F+S +L+ +  G  + IGI YG+ A+NLP+P  V  L++ +    V++YDA+  VLKAFANTG+E  + + N + LA  +      TW+ +N+  Y P+TKIT I+VG EV    D + +G +LPAM ++HTAL   GLDK++ ++++HSL +L  S+PPS+ +F K     + P+L+F V+  SPF+I+ YPY+AY+ S ++V L++ LF ++  +VDPA+ L Y NM  A
Sbjct:    1 MGQRLNLVFWIFVS-ILAFLNFGMASKIGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPDNA-TGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESPFMIDLYPYYAYRDSTEKVPLEYALFESSSQVVDPATGLLYSNMFDA 241          
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 9.944e-46
Identity = 101/235 (42.98%), Postives = 138/235 (58.72%), Query Frame = 1
Query:  247 ILFISGLLSHVKIGTS---IGINYGQIANNLPTPENVIPLVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGNEYLAKMR-DPDCAKTWIKSNVQAYLPATKITCINVGNEVLTFNDTSLSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLGSSYPPSAGAFRKDLVDCITPILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLFSANQGIVDPASNLHYDNMLFA 939
            I F+   LSH     +   IG+NYGQ+A+NLP P   + L++S    +V+LY ADP ++KA A TGV   +   N  +  +  DP+ A  WI SNV  + PA+KI  I VGNE+L  ND +L   LLPAM++V  AL  + L  ++ V+T +S+ VLGSS PPS+G+F       +  IL F   T SPF IN YP+FAY+  P+  +L F LF  N G VD  + + Y NM  A
Sbjct:    7 IYFLLIFLSHFPSSHAEPFIGVNYGQVADNLPPPSETVKLLQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPASKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQTGLKGILQFLSDTGSPFAINPYPFFAYQSDPRPETLAFCLFEPNAGRVDSKTGIKYTNMFDA 241          
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.436e-44
Identity = 95/241 (39.42%), Postives = 143/241 (59.34%), Query Frame = 1
Query:  220 MVMELSRLLILFISGLLSHVKIGTSIGINYGQIANNLPTPENVIPLVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGNEYL-AKMRDPDCAKTWIKSNVQAYLPATKITCINVGNEVLTFNDTSLSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLGSSYPPSAGAFRKDLVDCITPILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLFSANQGIVDPASNLHYDNMLFA 939
            M  +   +  + I  LL     G  +G+ YG+ A++LPTP  V+ L++      V++YD + +VLKAF NT +E  + + N  L A  +      TW+K++V  Y P TKIT I VG E       + S  ++PAM++V TAL  +GL +++ V+T  SLG+L  S+PPSAGAF       + P+L+F  +  SPF+I+ YPY+AY+ SP  VSLD+VLF ++  ++DP + L Y NM  A
Sbjct:    1 MARDFKLIFSISILLLLLDCCYGGKVGVCYGRSADDLPTPSKVVQLIQQHNIKYVRIYDYNSQVLKAFGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAESTDDPHINASSFVVPAMQNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPMLEFLAENKSPFMIDLYPYYAYRDSPNNVSLDYVLFESSSEVIDPNTGLLYKNMFDA 241          
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 5.646e-41
Identity = 101/244 (41.39%), Postives = 138/244 (56.56%), Query Frame = 1
Query:  220 MVMELSRLLILFISGLLSHVKIGTSIGINYGQIANNLPTPENVIPLVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGNEYLAKMRDPDC-AKTWIKSNVQAYLPATKITCINVGNEVLTFNDTSLSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLGSSYPPSAGAFRKDLVDCITPILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLF---SANQGIVDPASNLHYDNMLFA 939
            M   L   L LF S  LS   +   IG+N G    N+P+P  V+ L+KS    RV+LYDAD  +L AFA+TGV+  +S+ N+ L  +   +  A  W+  NV AY PAT IT I VG+EVLT + T+ +  L+ A++ +  ALV   LD+Q+ V+T HS  ++  S+PPS   F K     I P+L F   T SP L+N YPYF Y  S   + LD+ LF    AN+  VD  + LHY N+  A
Sbjct:    1 MAALLLLFLFLFASSALSQDSL---IGVNIGTEVTNMPSPTQVVALLKSQNINRVRLYDADRSMLLAFAHTGVQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLT-SLTNAASVLVSALKYIQAALVTANLDRQIKVSTPHSSTIILDSFPPSQAFFNKTWDPVIVPLLKFLQSTGSPLLLNVYPYFDYVQSNGVIPLDYALFQPLQANKEAVDANTLLHYTNVFDA 240          
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.843e-38
Identity = 103/247 (41.70%), Postives = 139/247 (56.28%), Query Frame = 1
Query:  226 MELSRLLILFISGLLSHVKIGTS--IGINYGQIANNLPTPENVIP-LVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGNEYLAKMRDP----DCAKTWIKSNVQAYLPATKITCINVGNEVLTFNDTSLSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLG-SSYPPSAGAFRKDLVDCITP-ILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLFSANQGIVDPASNLHYDNMLFA 939
            M L  LL+L  +G         S  IG+NYG  A+NLP+P +V   L       RVKL+DA+P  + AFA T +   VSL N  L  + D     D A++WI++N+  Y+PAT +T +  GNE+L   DT+L   LLPAM  +  AL   GL   V VTT H LG+L  S   PS  +FR      + P +L FH  T SPF++N YPYF+Y+      +L++ LF  N GI DPA+ L+Y +ML A
Sbjct:    1 MPLLILLMLLAAGAAGAESATPSLHIGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGL-TGVRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVNPYPYFSYRPE----TLNYALFRPNSGIYDPATKLNYTSMLDA 242          
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 9.967e-38
Identity = 89/249 (35.74%), Postives = 140/249 (56.22%), Query Frame = 1
Query:  205 LDPSFMVMELSRLLILFISGLLSHVKI--GTSIGINYGQIANNLPTPENVIPLVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGNEYLAKMR-DPDCAKTWIKSNVQAYLPATKITCINVGNEVLTFNDTS-LSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLGSSYPPSAGAFRKDLVDCITPILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLFSANQGIVDPASNLHYDNMLFA 939
            +D S   + L    I+ +  L+S  +I    S+G+ YG + NNLP    V+ L KS    R++LYD +   L+A   + +E  + + N  L  +  +P  A  W++ NV+ + PA K   I VGNEV     TS L+  LLPAM ++  A+ + GL   + V+++  + ++G+S+PPS G+FR D+   I PI+ F  +  SP L+N YPYF+Y G+P+ +SL + LF+A   +V   S L Y N+  A
Sbjct:    1 MDTSHKHIALQMAAIILLGLLVSSTEIVGAQSVGVCYGMLGNNLPPASQVVQLYKSKNIRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSFRNDVRSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPRDISLPYALFTAPNVVVQDGS-LGYRNLFDA 248          
BLAST of FC917637 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.469e-36
Identity = 86/219 (39.27%), Postives = 127/219 (57.99%), Query Frame = 1
Query:  295 IGINYGQIANNLPTPENVIPLVKSIGATRVKLYDADPKVLKAFANTGVEFTVSLGNEYLAKM-RDPDCAKTWIKSNVQAYLPATKITCINVGNEVLTFNDTSLSGCLLPAMESVHTALVNLGLDKQVSVTTAHSLGVLGSSYPPSAGAFRKDLVDCITPILDFHVKTASPFLINAYPYFAYKGSPKQVSLDFVLF---SANQGIVDPASNLHYDNMLFA 939
            IG+N G    N+P P +++ L+KS   T V+LYDA+  +LKAFANT +E  V + NE + K+ R P  A  W+  NV AY+P+T IT I VG+EVLT     ++  L  A+ ++H ALV   L+ +V V++  S+ ++   +PPS   F       +  +L F   T S F++NAYPY+ Y  +     LD+ LF   S  + IVDP + LHY++M  A
Sbjct:   26 IGVNIGTDLTNMPPPSDIVTLLKSQQITHVRLYDANSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEVLT-TIPHVAPILASALNNIHKALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTFSPSWNTTVYQLLQFLKNTGSFFMLNAYPYYGYTTANGIFPLDYALFKQLSPVKQIVDPNTLLHYNSMFDA 243          
The following BLAST results are available for this feature:
BLAST of FC917637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E1311_ARATH2.116e-8866.38Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E1310_ARATH4.412e-8666.53Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E1314_ARATH1.378e-7156.17Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E1312_ARATH3.091e-4741.15Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E137_ARATH9.944e-4642.98Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E1313_ARATH1.436e-4439.42Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E133_ARATH5.646e-4141.39Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E13B_WHEAT5.843e-3841.70Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
GUB_NICPL9.967e-3835.74Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E134_ARATH5.469e-3639.27Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA6DD06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA6DD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917637 ID=FC917637; Name=FC917637; organism=Citrus clementina; type=EST; length=940bp
ATCTTTCTCAAACTCGTTGCTTTCACCATTGCGTGTCCGATCTTGTCAAG
TGGTGAAAAGTGAACTCACGTTAACGCACAGTTGTCCAAGCTTTACTTGC
GGAAATTGAATACCCATTTCGATTTAGGGCATTCAATCAAATCTACCTAT
TAGGCCTTTAGCTAGTCTTCACTTTGTGGTGTCTCAGTTTCACACAACTT
TAGATTGGATCCGTCATTCATGGTCATGGAGTTAAGTAGATTGCTCATTC
TTTTCATTTCAGGATTATTGTCTCATGTAAAGATTGGAACTTCAATTGGG
ATCAACTATGGCCAAATTGCAAACAATTTACCAACTCCAGAAAATGTAAT
ACCTCTAGTGAAATCAATTGGTGCCACCAGAGTGAAGCTCTATGATGCAG
ATCCAAAAGTTCTCAAAGCATTTGCAAACACTGGTGTTGAATTCACGGTA
AGTCTAGGAAATGAGTACTTAGCCAAAATGAGAGACCCAGATTGTGCTAA
AACTTGGATCAAATCCAACGTACAAGCTTACTTACCAGCCACCAAAATCA
CTTGCATCAATGTCGGCAATGAAGTTTTAACCTTTAATGACACCTCACTC
AGTGGCTGCTTACTTCCTGCAATGGAAAGTGTTCACACAGCATTAGTGAA
TCTCGGACTTGACAAACAAGTTAGTGTCACTACAGCTCATTCTCTAGGTG
TTCTTGGAAGCTCATACCCGCCTTCAGCTGGAGCTTTCCGTAAAGATCTG
GTGGATTGTATAACACCCATCTTGGACTTTCATGTCAAAACTGCCTCTCC
ATTTTTGATTAATGCTTACCCTTATTTTGCTTACAAGGGTAGTCCAAAGC
AGGTGTCTCTAGATTTTGTATTGTTTTCAGCAAACCAAGGGATTGTTGAC
CCAGCTTCAAATCTTCATTATGACAACATGTTGTTTGCTC
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