FC917652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_PSEFL (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Pseudomonas fluorescens GN=pgsA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.712e-24 Identity = 59/119 (49.58%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 462 LTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAA 818 + +P ++T+ RV +P+ I FY+ W +S+F AA TDWLDGY+AR++ + FGAFLDPVADKLMVA LVLL + L W LT+PA IIGREI +SA+REW A Sbjct: 1 MNIPNLITVLRVLLIPIFILLFYLPYNWSYMAASSVFAFAAATDWLDGYLARRLEQSTPFGAFLDPVADKLMVAVALVLLVQEHGNL-------W-LTLPAAVIIGREIVVSALREWMA 111
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_ERWCT (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Erwinia carotovora subsp. atroseptica GN=pgsA PE=3 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 4.626e-24 Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 3 Query: 468 LPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875 +PT+LTL RVA +P + FY+ W IF+ AAVTDW DG++AR+ + + FGAFLDPVADK+MVA LVL+ W +T+PA +I REI +SA+REW A + +VAV+ +GK K Sbjct: 5 IPTLLTLFRVALIPFFVLAFYLPFVWAPLLCALIFVFAAVTDWFDGFLARRWKQTTRFGAFLDPVADKVMVAVALVLVAEY--------YHSWWITLPAATMIAREIIISALREWMAEIGKR--SSVAVSWIGKVK 130
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_HAEIN (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Haemophilus influenzae GN=pgsA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.042e-24 Identity = 63/136 (46.32%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 468 LPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875 +P LT+ RV +P + FY+ TT IF A VTDWLDGY+ARK + + FGAFLDPVADK+MV A LVL+ V Q + +T+PAI +I REI +SA+REW A + +AV+ GKWK Sbjct: 5 IPIFLTIFRVILIPFFVIAFYLPIESSPFITTLIFFIAGVTDWLDGYLARKWKQTTRFGAFLDPVADKVMVVAALVLI--------VEHQHTFWITIPAIIMISREIIISALREWMAELGER--SKIAVSWWGKWK 130
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_PHOLL (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=pgsA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.891e-24 Identity = 61/138 (44.20%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 462 LTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875 L +PT LTL R+A +P + FY+ W IFI AA TDW DG++AR + + FGAFLDPVADK+MVAA LVL+ W +T+PA +I REI +S++REW A + +VAV+ +GK K Sbjct: 3 LNIPTWLTLFRIALIPFFVLAFYLPFTWAPMVCAIIFIVAAATDWFDGFLARLWKQTTRFGAFLDPVADKIMVAAALVLVSEH--------YHTWWITLPAATMIAREIIISSLREWMAELGKR--SSVAVSWMGKVK 130
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_SODGM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Sodalis glossinidius (strain morsitans) GN=pgsA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23 Identity = 61/138 (44.20%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 462 LTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875 L +PT LTL RV +P + FY+ W IF+ AAVTDW DG++AR+ + + FGAFLDPVADK+MVA LVL+ W +T+PA +I REI +SA+REW A + +VAV+ +GK K Sbjct: 3 LNIPTWLTLFRVVMIPFFVLAFYLPFKWAPLCCALIFVLAAVTDWFDGFLARRWKQTTRFGAFLDPVADKVMVAMALVLVAEH--------FHSWWITLPAATMIAREIIISALREWMAEIGKR--SSVAVSWIGKVK 130
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_SALCH (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Salmonella choleraesuis GN=pgsA PE=3 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 3.916e-23 Identity = 58/136 (42.65%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 468 LPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875 +PT+LTL RV +P L+ FY+ W + IF AA+TDW DG++AR+ + FGAFLDPVADK++VA +VL+ W +T+PA +I REI +SA+REW A + +VAV+ +GK K Sbjct: 5 IPTLLTLFRVILIPFLVVVFYLPFAWAPMVSALIFCIAAITDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEH--------YHSWWVTLPAATMIAREIIISALREWMAELGKR--SSVAVSWIGKVK 130
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_YERPS (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Yersinia pseudotuberculosis GN=pgsA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23 Identity = 59/138 (42.75%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 462 LTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875 L +PT LTL RV +P + FY+ W IF+ AA TDW DG++AR+ + + FGAFLDPVADK+MVA LVL+ W +T+PA +I REI +S++REW A + +VAV+ +GK K Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRFGAFLDPVADKVMVAVALVLVAEH--------YHSWWITLPAATMIAREIIISSLREWMAEIGKR--SSVAVSWVGKVK 130
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_YERPP (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Yersinia pestis (strain Pestoides F) GN=pgsA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23 Identity = 59/138 (42.75%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 462 LTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875 L +PT LTL RV +P + FY+ W IF+ AA TDW DG++AR+ + + FGAFLDPVADK+MVA LVL+ W +T+PA +I REI +S++REW A + +VAV+ +GK K Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRFGAFLDPVADKVMVAVALVLVAEH--------YHSWWITLPAATMIAREIIISSLREWMAEIGKR--SSVAVSWVGKVK 130
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_YERPN (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=pgsA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23 Identity = 59/138 (42.75%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 462 LTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875 L +PT LTL RV +P + FY+ W IF+ AA TDW DG++AR+ + + FGAFLDPVADK+MVA LVL+ W +T+PA +I REI +S++REW A + +VAV+ +GK K Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRFGAFLDPVADKVMVAVALVLVAEH--------YHSWWITLPAATMIAREIIISSLREWMAEIGKR--SSVAVSWVGKVK 130
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_YERPE (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Yersinia pestis GN=pgsA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23 Identity = 59/138 (42.75%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 462 LTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875 L +PT LTL RV +P + FY+ W IF+ AA TDW DG++AR+ + + FGAFLDPVADK+MVA LVL+ W +T+PA +I REI +S++REW A + +VAV+ +GK K Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRFGAFLDPVADKVMVAVALVLVAEH--------YHSWWITLPAATMIAREIIISSLREWMAEIGKR--SSVAVSWVGKVK 130 The following BLAST results are available for this feature:
BLAST of FC917652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917652 ID=FC917652; Name=FC917652; organism=Citrus clementina; type=EST; length=915bpback to top |