FC917667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917667 vs. ExPASy Swiss-Prot
Match: EIF3A_TOBAC (Eukaryotic translation initiation factor 3 subunit A OS=Nicotiana tabacum GN=TIF3A1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.293e-59 Identity = 138/282 (48.94%), Postives = 162/282 (57.45%), Query Frame = 3 Query: 3 LNKVRALIYPPANKALKLGEMLAGLGEIVDKEHKRLLARKSIIEKRKXXXXXXXXXXXXXXXXXXLKQQKITEEAEQKRLAAEFEHRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQQRLEEEKVLHEREQQLEVELSRQRHDGDLREKYRLSRMLDNKNTFQXXXXXXXXXXXXXXXXXXXXXISLIIXXXXXXXXXXXXXIFYVRTEEEKIKRLRE 848 L+K R +IYPPA KA KLGE L+ L EIV+KEHKRLLARKSIIEKRK QK+TEEAEQKR+AAE+E R+N +TK+ +ME AL EQLRERQEMEKKL K AK+MD+LERAKREEAAPLI++AF+QRL EE LHEREQQ E+ELSRQRH GDL EK RL+RML+NK Q IS II IF++R+EEE+ KRL+E Sbjct: 529 LSKARTMIYPPAKKAAKLGEALSNLAEIVEKEHKRLLARKSIIEKRKEEQERLLLEMERVEETKRRDVQKMTEEAEQKRIAAEYEQRRNQRILKEIEDRELEEAQALLHEAEKRSKRKKKPVLEGEK--MTKKVIMELALNEQLRERQEMEKKLLKFAKSMDHLERAKREEAAPLIESAFKQRLAEEAALHEREQQQEIELSRQRHAGDLEEKRRLARMLENKRILQEKVVSSREAEFTRMKRERQERISQIIQSRKQEREARRKMIFFLRSEEERQKRLQE 808
BLAST of FC917667 vs. ExPASy Swiss-Prot
Match: EIF3A_ARATH (Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana GN=TIF3A1 PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 7.375e-58 Identity = 135/282 (47.87%), Postives = 164/282 (58.16%), Query Frame = 3 Query: 3 LNKVRALIYPPANKALKLGEMLAGLGEIVDKEHKRLLARKSIIEKRKXXXXXXXXXXXXXXXXXXLKQQKITEEAEQKRLAAEFEHRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQQRLEEEKVLHEREQQLEVELSRQRHDGDLREKYRLSRMLDNKNTFQXXXXXXXXXXXXXXXXXXXXXISLIIXXXXXXXXXXXXXIFYVRTEEEKIKRLRE 848 L+KVRA++YP +KA KL ++ L + V+KEHKRLLARKSIIEKRK LK QK+TEEAEQKRLAAE R+ VTKQ++ ERALTEQL+ERQEMEKKLQKLAKTMDYLERAKREEAAPLI+AA+Q+RL EE+ +EREQQ EVELS++RH+ DL+EK RLSRML NK FQ IS II I+Y++ EEE+I++L+E Sbjct: 529 LSKVRAMLYPVPSKASKLAGVIPNLADTVEKEHKRLLARKSIIEKRKEDQERQQLEMEREEEQKRLKLQKLTEEAEQKRLAAELAERRKQRILREIEEKELEEAQALLEETEKRMKKGKKKPLLDGEK-VTKQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFYEREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISKIIREKKQERDIKRKQIYYLKIEEERIRKLQE 809
BLAST of FC917667 vs. ExPASy Swiss-Prot
Match: EIF3A_MAIZE (Eukaryotic translation initiation factor 3 subunit A OS=Zea mays GN=TIF3A1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.907e-46 Identity = 117/282 (41.49%), Postives = 143/282 (50.71%), Query Frame = 3 Query: 3 LNKVRALIYPPANKALKLGEMLAGLGEIVDKEHKRLLARKSIIEKRKXXXXXXXXXXXXXXXXXXLKQQKITEEAEQKRLAAEFEHRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQQRLEEEKVLHEREQQLEVELSRQRHDGDLREKYRLSRMLDNKNTFQXXXXXXXXXXXXXXXXXXXXXISLIIXXXXXXXXXXXXXIFYVRTEEEKIKRLRE 848 LNK R I PP K KLGE L L IV+ EHKRLLARKSIIEKRK + QK T + E+ RL E R+ +TK+ ME A EQL+ER EMEKKLQK AKTMDYLERAKR+E APLI+ AFQ+RLEEEK+LHE+EQ E+ELS+Q H DL+EK RLSRML++KN Q ++ +I +FY+ EE++I+ LRE Sbjct: 527 LNKARIHICPPVKKPSKLGESLISLAAIVENEHKRLLARKSIIEKRKEELERQILEKEKEEEKKRMSSQKKTVDEERVRLLNEQRQREQDRIRREIEEKNKAEAKKMLEDLNKAGKKHVVVEGE-----LTKEAYMELARNEQLKERHEMEKKLQKFAKTMDYLERAKRQEEAPLIEQAFQKRLEEEKILHEQEQLREIELSKQHHASDLQEKNRLSRMLEHKNALQERIIQERAAEFGRLKKERDERMNRLISSRKHERETVRKLMFYLNLEEQRIEMLRE 803 The following BLAST results are available for this feature:
BLAST of FC917667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917667 ID=FC917667; Name=FC917667; organism=Citrus clementina; type=EST; length=850bpback to top |