FC917684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917684 vs. ExPASy Swiss-Prot
Match: SCR_PEA (Protein SCARECROW OS=Pisum sativum GN=SCR PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26 Identity = 93/267 (34.83%), Postives = 128/267 (47.94%), Query Frame = 2 Query: 65 EGKMVRKRTASEMEVQQQQLYSGSSDYYR-SRLPRRNNPIN-QAPTATPSAIPNYSTMS---------SFNDNVNMSTLTLPPSSLINN---------------------VTSGASGFLXXXXXXXXXXXXNFSCIDNLSXXXXXXXXXXXXXAVCGFSGLPLFPPADHHQRNRNAASIGLIPAAPSCTSANNLASSMEDSSATA-WIDGIIKDLIHNSANVSIPQLIHNVREIIFPCNPNLAALLEYRLRSLNSEP---LLERSRN 757 E K++RKR ASEME+Q + ++DY+R SR + +N P T + +T + + N+N N +S+INN VT+ S L + S + +CGFSGLPLFP ++ N S + + + SME++SAT WIDGI+KDLIH S +VSIPQLI+NVREII+PCNPNLA +LE+RLR L +EP + ER RN Sbjct: 48 ERKLLRKRMASEMELQLHN-NNNNNDYHRFSRRTNNTSSLNCSLPATTQKGVTTTTTTTLASSGNNNNNNNNNNNYHYHNNNNNSIINNNNNNVALSRDNVAIQNFPTVTVTTNYSTMLLPSSCSSNLNNSSTSAANYTHYQQPLVEEQNTLPEICGFSGLPLFPSQNNQTNRTNNNSSNNRNNTNTVVDVVSSSPSMEETSATTNWIDGILKDLIHTSNSVSIPQLINNVREIIYPCNPNLALVLEHRLRLL-TEPNTCVPERKRN 312
BLAST of FC917684 vs. ExPASy Swiss-Prot
Match: SCR_IPONI (Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.480e-24 Identity = 98/251 (39.04%), Postives = 124/251 (49.40%), Query Frame = 2 Query: 71 KMVRKRTASEMEVQQQQLYSGSSDYYRSRLPRRNNPI------------------NQAPTATPSAI--PNYSTMSSFNDNVNMSTLTL--PPSSLINNVTSGASGFLXXXXXXXXXXXXNFSCIDNLSXXXXXXXXXXXXXAVCGFSGLPLFPPADHHQRNRNAASIGLIPAAPSCTSANNLASSMEDSS---------ATAWIDGIIKDLIHNSANVSIPQLIHNVREIIFPCNPNLAALLEYRLRSLNS 730 KMVRKR ASEME+Q + G S++ R RRN P+ N + ++ PN+ ++ N ST+ + PP+S +VTS + + + ++ L +C FSGLPLFP R RNAA L PA P +A+ A + SS A AWIDGIIKDLIH S +VSIPQLI NVREII PCNPNLAALLEYRLRSL + Sbjct: 58 KMVRKRAASEMELQ---IGGGISEH--GRFLRRNAPLLGDLRVCGTNFGGGAGGDNGGGNSLGVSVSHPNHVVVN------NYSTMQIAPPPTSTNLSVTSTSDA-------------THLAYMEQLPPNEPQAPLP-----LCVFSGLPLFPAPS---RARNAAGAALQPA-PLPVTASGSAIGVNSSSGGGMGDNGTAMAWIDGIIKDLIHISTHVSIPQLIQNVREIIHPCNPNLAALLEYRLRSLTT 275
BLAST of FC917684 vs. ExPASy Swiss-Prot
Match: SCR_ARATH (Protein SCARECROW OS=Arabidopsis thaliana GN=SCR PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.809e-22 Identity = 66/133 (49.62%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 428 AVCGFSGLPLFPPADHHQRNRNAASIGLIPAAPSCTSANNLASSMEDSSATAWIDGIIKDLIHNSANVSIPQLIHNVREIIFPCNPNLAALLEYRLRSLNSEPLLERSRNKDAALPLHMLQRANYYINNNNTP 826 +VCGFSGLP+FP +D RN ++ P + SS +S T W+D II+DLIH+S +VSIPQLI NVR+IIFPCNPNL ALLEYRLRSL LL+ S + D P Y I+NN +P Sbjct: 102 SVCGFSGLPVFP-SDRGGRNV------MMSVQPM-----DQDSSSSSASPTVWVDAIIRDLIHSSTSVSIPQLIQNVRDIIFPCNPNLGALLEYRLRSL---MLLDPSSSSD---PSPQTFEPLYQISNNPSP 216
BLAST of FC917684 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSJ (Protein SCARECROW 2 OS=Oryza sativa subsp. japonica GN=SCR2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.140e-15 Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 449 LPLFPPADHHQRNRNAASIGLIPAAPSCTSANNLASSMEDSSATAWIDGIIKDLIHNS-ANVSIPQLIHNVREIIFPCNPNLAALLEYRLRS-LNSEP 736 LP PA HH + AAP+ + +A+ +TAW+DGII+D+I +S A VS+ QLIHNVREII PCNP+LA++LE RLRS LNS+P Sbjct: 103 LPTQLPAFHHT--------DMDLAAPAPPAPQQVAAGEGGPPSTAWVDGIIRDIIASSGAAVSVAQLIHNVREIIRPCNPDLASILELRLRSLLNSDP 192
BLAST of FC917684 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSI (Protein SCARECROW 2 OS=Oryza sativa subsp. indica GN=SCR2 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 8.140e-15 Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 449 LPLFPPADHHQRNRNAASIGLIPAAPSCTSANNLASSMEDSSATAWIDGIIKDLIHNS-ANVSIPQLIHNVREIIFPCNPNLAALLEYRLRS-LNSEP 736 LP PA HH + AAP+ + +A+ +TAW+DGII+D+I +S A VS+ QLIHNVREII PCNP+LA++LE RLRS LNS+P Sbjct: 103 LPTQLPAFHHT--------DMDLAAPAPPAPQQVAAGEGGPPSTAWVDGIIRDIIASSGAAVSVAQLIHNVREIIRPCNPDLASILELRLRSLLNSDP 192
BLAST of FC917684 vs. ExPASy Swiss-Prot
Match: SCR_MAIZE (Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14 Identity = 49/90 (54.44%), Postives = 61/90 (67.78%), Query Frame = 2 Query: 461 PPADHHQRNRNAASIGLIPAAPSCTSANNLASSMEDSSATAWIDGIIKDLIHNS--ANVSIPQLIHNVREIIFPCNPNLAALLEYRLRSL 724 PPA H +A + +PA P+ +A+ A +S TAW+DGII+D+I +S A VSI QLIHNVREII PCNP LA+LLE RLRSL Sbjct: 108 PPAFQH----HAPEVD-VPAHPA-PAAHAQAGGEATASTTAWVDGIIRDIIGSSGGAAVSITQLIHNVREIIHPCNPGLASLLELRLRSL 191
BLAST of FC917684 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSJ (Protein SCARECROW 1 OS=Oryza sativa subsp. japonica GN=SCR1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.175e-13 Identity = 50/98 (51.02%), Postives = 62/98 (63.27%), Query Frame = 2 Query: 449 LPLFPPADHHQRNRNAASIGLIPAAPSCTSANNLASSMEDSSATAWIDGIIKDLIHNS-ANVSIPQLIHNVREIIFPCNPNLAALLEYRLRS-LNSEP 736 LP PA HH AA PA P +A+ +TAW+DGII+D+I +S A VS+ QLIHNVREII PCNP+LA++LE RLRS L S+P Sbjct: 100 LPTQLPAFHHTDMDLAA-----PAPPP--PQQQVAAGEGGPPSTAWVDGIIRDIIASSGAAVSVAQLIHNVREIIRPCNPDLASILELRLRSLLTSDP 190
BLAST of FC917684 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSI (Protein SCARECROW 1 OS=Oryza sativa subsp. indica GN=SCR1 PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.175e-13 Identity = 50/98 (51.02%), Postives = 62/98 (63.27%), Query Frame = 2 Query: 449 LPLFPPADHHQRNRNAASIGLIPAAPSCTSANNLASSMEDSSATAWIDGIIKDLIHNS-ANVSIPQLIHNVREIIFPCNPNLAALLEYRLRS-LNSEP 736 LP PA HH AA PA P +A+ +TAW+DGII+D+I +S A VS+ QLIHNVREII PCNP+LA++LE RLRS L S+P Sbjct: 100 LPTQLPAFHHTDMDLAA-----PAPPP--PQQQVAAGEGGPPSTAWVDGIIRDIIASSGAAVSVAQLIHNVREIIRPCNPDLASILELRLRSLLTSDP 190 The following BLAST results are available for this feature:
BLAST of FC917684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917684 ID=FC917684; Name=FC917684; organism=Citrus clementina; type=EST; length=876bpback to top |