FC917723

Overview
NameFC917723
Unique NameFC917723
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10954 contig Ccv1_Contig10954:736..1413. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC917723 vs. ExPASy Swiss-Prot
Match: MIND_MESVI (Putative septum site-determining protein minD OS=Mesostigma viride GN=minD PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16
Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = -2
Query:  461 IREIKMVVNRVRGDMIKGEDMMLVLDLQEMLGLGFLGVIPEDSEVIRS*NRGYPLVLNKPPTLAGLAFEQGA 676
            I E+K++VNRVR DMI+  DM+ V D+QEMLG+  LG IPED+ VI S NRG PLVLNK  TL+G++FE  A
Sbjct:  180 IYEVKLLVNRVRPDMIQKNDMLSVRDVQEMLGIPLLGAIPEDTNVIVSTNRGQPLVLNKKLTLSGISFENAA 251          
BLAST of FC917723 vs. ExPASy Swiss-Prot
Match: MIND_CHLVU (Putative septum site-determining protein minD OS=Chlorella vulgaris GN=minD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16
Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = -2
Query:  461 IREIKMVVNRVRGDMIKGEDMMLVLDLQEMLGLGFLGVIPEDSEVIRS*NRGYPLVLNKPPTLAGLAFEQGA 676
            I  +K++VNRVR DMI+  DMM V D+QEMLG+  LG IPED+ VI S N+G PLVLNK  TL+G+AFE  A
Sbjct:  179 IYNVKLLVNRVRPDMIQKNDMMSVRDVQEMLGIPLLGAIPEDTSVIISTNKGEPLVLNKKLTLSGIAFENAA 250          
BLAST of FC917723 vs. ExPASy Swiss-Prot
Match: MIND_OLTVI (Putative septum site-determining protein minD OS=Oltmannsiellopsis viridis GN=minD PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.063e-15
Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = -2
Query:  461 IREIKMVVNRVRGDMIKGEDMMLVLDLQEMLGLGFLGVIPEDSEVIRS*NRGYPLVLNKPPTLAGLAFEQGA 676
            I  +K++VNRVR +MI+  DMM V D+QEMLG+  LG IPED+ VI S NRG PLVL K  TL+G+AFE  A
Sbjct:  215 IYNVKLLVNRVRSEMIQQNDMMSVRDVQEMLGIPLLGAIPEDNHVIISTNRGEPLVLKKKLTLSGIAFENAA 286          
BLAST of FC917723 vs. ExPASy Swiss-Prot
Match: MIND_PSEAK (Putative septum site-determining protein minD OS=Pseudendoclonium akinetum GN=minD PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15
Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = -2
Query:  461 IREIKMVVNRVRGDMIKGEDMMLVLDLQEMLGLGFLGVIPEDSEVIRS*NRGYPLVLNKPPTLAGLAFEQGA 676
            I +IK+++NRVR D+I+  DMM V D+QE+LG+  LG IPED++VI S NRG PLVL K  TL+G+AFE  A
Sbjct:  204 IFDIKLLINRVRSDLIQKNDMMSVRDVQEVLGVPLLGAIPEDNQVIVSTNRGEPLVLKKKLTLSGIAFENAA 275          
BLAST of FC917723 vs. ExPASy Swiss-Prot
Match: MIND_GUITH (Putative septum site-determining protein minD OS=Guillardia theta GN=minD PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = -2
Query:  440 IREIKMVVNRVRGDMIKGEDMMLVLDLQEMLGLGFLGVIPEDSEVIRS*NRGYPLVLNKPPTLAGLAFEQGAWGLFEQD 676
            I++IK++VNR+R  M+K  DMM V D++E+L +  +GVIPED  VI S NRG PLVL K  +L GLAFE  A  L  Q+
Sbjct:  164 IKQIKLLVNRLRPQMVKANDMMSVADVREILAIPLIGVIPEDECVIVSTNRGEPLVLEKNLSLPGLAFEHTACRLDGQE 242          
BLAST of FC917723 vs. ExPASy Swiss-Prot
Match: MIND_NEPOL (Putative septum site-determining protein minD OS=Nephroselmis olivacea GN=minD-A PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = -2
Query:  461 IKMVVNRVRGDMIKGEDMMLVLDLQEMLGLGFLGVIPEDSEVIRS*NRGYPLVLNKPPTLAGLAFEQGA 667
            +++V NRVR +MI+  DMM V D+Q M+G+  LG IPED  VI S NRG PLV  K  TLAG+AFE+ A
Sbjct:  179 VRLVANRVRPEMIQQNDMMSVDDVQGMIGVPLLGAIPEDKNVIISTNRGEPLVCQKTITLAGVAFEEAA 247          
BLAST of FC917723 vs. ExPASy Swiss-Prot
Match: MIND_EMIHU (Putative septum site-determining protein minD OS=Emiliania huxleyi GN=minD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11
Identity = 30/68 (44.12%), Postives = 51/68 (75.00%), Query Frame = -2
Query:  473 IREIKMVVNRVRGDMIKGEDMMLVLDLQEMLGLGFLGVIPEDSEVIRS*NRGYPLVLNKPPTLAGLAF 676
            I +I +++NR+R +M+K E+MM V D++++LG+  +GV+P+  +VI + NRG PLVL+   ++ GLAF
Sbjct:  164 ITDISLIINRLRPEMVKAENMMSVTDVKDILGIPLIGVVPDSEQVITASNRGEPLVLDDKVSIPGLAF 231          
The following BLAST results are available for this feature:
BLAST of FC917723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MIND_MESVI1.256e-1661.11Putative septum site-determining protein minD OS=M... [more]
MIND_CHLVU2.797e-1661.11Putative septum site-determining protein minD OS=C... [more]
MIND_OLTVI1.063e-1559.72Putative septum site-determining protein minD OS=O... [more]
MIND_PSEAK1.388e-1558.33Putative septum site-determining protein minD OS=P... [more]
MIND_GUITH7.618e-1453.16Putative septum site-determining protein minD OS=G... [more]
MIND_NEPOL3.781e-1356.52Putative septum site-determining protein minD OS=N... [more]
MIND_EMIHU2.075e-1144.12Putative septum site-determining protein minD OS=E... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA1DC11FM1 IVIA1 Citrus clementina cDNA clone IC0AAA1DC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917723 ID=FC917723; Name=FC917723; organism=Citrus clementina; type=EST; length=677bp
TTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTCCCCAAGGGGAA
AAAAATAAAATTCTTTGAACTACTGAAATATTGCTTGATTACCACCCAAC
AAATTCAGGGGTTCACAGCAACTTCCACTCTGGCTTTCAAAAATACAAAA
TTGAACCTTGAACTGACCACTACATTATCGTATCAACAAAATTGGAAACA
CAACTGACCCAACCTCTAATCCAACATTTACAGCCAACACCCCTAAACCT
GAAATCCAAAACTCATAAAATCCCTACAAAAAATGCAAACTTTACTTACC
AACTGTACACAGCTTTCAAAAACTCCCCAAAATCAAAAACAAAGGGGACC
ATCAACTGATCAAAATCTTTCTACCCACCAAAAAACAAAAAAAACCCCCG
TCTCTTGGGTTCCTCTTCAACCAAAACAGCCTTCATGCTATCTTGCTCAA
AAAGGCCCCAAGCACCTTGCTCAAATGCTAACCCAGCAAGTGTAGGTGGT
TTATTCAAAACCAAAGGATACCCTCTATTCTAACTCCTTATAACTTCTGA
ATCCTCAGGAATTACACCTAAAAAACCCAAACCCAACATCTCTTGAAGGT
CTAAAACCAACATCATATCCTCTCCTTTGATCATATCACCCCTCACTCTA
TTCACAACCATCTTTATTTCCCTAATC
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