FC917772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917772 vs. ExPASy Swiss-Prot
Match: TRAD1_MACFA (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.174e-23 Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 52 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRC 441 D+ T++C +C + IP N +H HC RN+ C +C + P+ E H H V C +C++ +E+ +L H+ +CP R+ C C+ L + L EH++ CG RTELC C R + +++ H C Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVC 135
BLAST of FC917772 vs. ExPASy Swiss-Prot
Match: XAF1_HUMAN (XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23 Identity = 52/161 (32.30%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 67 ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFY 549 +C +C R + S+N LH A+C R L C C + VP++ EEH H V C+ C ++M++ L HK +C +R V C FC+ + L H+ CG+RTELC C ++I R H C + +G + A E + H P N+++ Sbjct: 7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLAQHRDVCRS-EQAQLGKGERISAPEREIYCHYCNQMIPENKYF 166
BLAST of FC917772 vs. ExPASy Swiss-Prot
Match: TRAD1_HUMAN (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens GN=TRAFD1 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.826e-23 Identity = 60/227 (26.43%), Postives = 99/227 (43.61%), Query Frame = 1 Query: 52 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRC----------TGVPENTVGSS-------------RNVRAAESDQGAHRRPAPPPPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH*QQNRG 663 D+ T++C +C + IP N +H HC RN+ C C + P+ E H H V C +C++ +E+ +L H+ +CP R+ C C+ L + L EH++ CG RTELC C R + +++ H C +P N S R + A + RRP ++ + R IT + +LF ++ + ++NRG Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMRLPRRPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQERQ------ERNRG 226
BLAST of FC917772 vs. ExPASy Swiss-Prot
Match: TRAD1_RAT (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Trafd1 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 52 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPE 456 D+ ++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H +CP R+ C C+ L V L EH++ CG RTELC C R + ++E H + C V E Sbjct: 7 DQAARLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELQTHPAVCGRVEE 140
BLAST of FC917772 vs. ExPASy Swiss-Prot
Match: TRAD1_MOUSE (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus GN=Trafd1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.505e-22 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 52 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPE 456 D+ +++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H +CP R+ C C+ L V L EH++ CG RTELC C R + ++E H C V E Sbjct: 7 DQASRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTC-KCNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELKTHPEVCGRVEE 140
BLAST of FC917772 vs. ExPASy Swiss-Prot
Match: TRAD1_BOVIN (TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.505e-22 Identity = 50/157 (31.85%), Postives = 80/157 (50.96%), Query Frame = 1 Query: 49 SDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRC-TGVPENTVGSSRNVRAAESDQGAHR 516 +D+ T++C +C + IP N +H HC RN+ C VC + P+ E H H V C +C++ +E+ L H+ +CP R+ C C+ L + L +H++ CG RTELC C R + +++ H C V E V ++ A + G R Sbjct: 6 NDQDTRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTC-KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTCGRNVLVKDLKTHPEVCGRDVEEKRVEAAMPPNAYDESWGPDR 161
BLAST of FC917772 vs. ExPASy Swiss-Prot
Match: XAF1_BOVIN (XIAP-associated factor 1 OS=Bos taurus GN=XAF1 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 7.732e-19 Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 64 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFP--LPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFY 549 ++C +C R + S+++ LH AHC L C C + V + EEH H V C+ C +++ + L H+ ++C +R V C FC+ L VDL EH CG +TELC C +++ LR H C + + +++ ES+ H P N+++ Sbjct: 6 QVCRNCKRRVASNHLGLHEAHCLMYLVLCPECKEPVLQHEMEEHCQGGHQQVGCAMCQQSVPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEHH--CGQQTELCPDCGQHVMLRVLARHREECQR-EQLRLQKGKSIPVPESNICCHYCNQMIPGNKYF 166 The following BLAST results are available for this feature:
BLAST of FC917772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917772 ID=FC917772; Name=FC917772; organism=Citrus clementina; type=EST; length=926bpback to top |